data_B7Y # _chem_comp.id B7Y _chem_comp.name "methyl (2S)-2-[[3-(4-chloranylbutanoyl)phenyl]carbonylamino]-3-methyl-butanoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H22 Cl N O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-05-17 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 339.814 _chem_comp.one_letter_code ? _chem_comp.three_letter_code B7Y _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8JCO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal B7Y C02 C1 C 0 1 N N N N N N -9.547 16.589 70.263 -1.672 -0.302 -0.183 C02 B7Y 1 B7Y C04 C2 C 0 1 N N S N N N -9.829 15.928 72.653 -4.105 -0.424 -0.228 C04 B7Y 2 B7Y C05 C3 C 0 1 N N N N N N -10.229 16.619 73.966 -4.468 -1.344 0.939 C05 B7Y 3 B7Y C06 C4 C 0 1 N N N N N N -11.194 15.920 74.932 -5.771 -2.082 0.620 C06 B7Y 4 B7Y C07 C5 C 0 1 N N N N N N -8.969 17.139 74.679 -3.346 -2.362 1.154 C07 B7Y 5 B7Y C08 C6 C 0 1 N N N N N N -10.619 14.664 72.198 -5.210 0.579 -0.440 C08 B7Y 6 B7Y C10 C7 C 0 1 N N N N N N -12.524 13.578 72.996 -7.465 1.179 -0.924 C10 B7Y 7 B7Y C12 C8 C 0 1 Y N N N N N -9.566 17.557 69.106 -0.413 0.410 0.125 C12 B7Y 8 B7Y C13 C9 C 0 1 Y N N N N N -8.962 18.771 69.158 -0.452 1.689 0.687 C13 B7Y 9 B7Y C14 C10 C 0 1 Y N N N N N -9.012 19.591 68.064 0.722 2.357 0.976 C14 B7Y 10 B7Y C15 C11 C 0 1 Y N N N N N -9.638 19.207 66.900 1.942 1.768 0.714 C15 B7Y 11 B7Y C16 C12 C 0 1 Y N N N N N -10.211 17.976 66.852 1.997 0.487 0.151 C16 B7Y 12 B7Y C17 C13 C 0 1 N N N N N N -10.967 17.498 65.608 3.298 -0.141 -0.129 C17 B7Y 13 B7Y C18 C14 C 0 1 N N N N N N -11.937 16.340 65.788 4.574 0.595 0.190 C18 B7Y 14 B7Y C19 C15 C 0 1 N N N N N N -12.123 15.497 64.476 5.773 -0.274 -0.195 C19 B7Y 15 B7Y C20 C16 C 0 1 N N N N N N -12.312 14.008 64.751 7.069 0.473 0.128 C20 B7Y 16 B7Y C23 C17 C 0 1 Y N N N N N -10.198 17.166 67.952 0.813 -0.195 -0.138 C23 B7Y 17 B7Y N03 N1 N 0 1 N N N N N N -9.813 16.957 71.619 -2.858 0.282 0.078 N03 B7Y 18 B7Y O01 O1 O 0 1 N N N N N N -9.302 15.489 70.007 -1.637 -1.413 -0.676 O01 B7Y 19 B7Y O09 O2 O 0 1 N N N N N N -12.023 14.583 72.182 -6.451 0.158 -0.733 O09 B7Y 20 B7Y O11 O3 O 0 1 N N N N N N -10.011 13.711 71.798 -4.980 1.761 -0.346 O11 B7Y 21 B7Y O22 O4 O 0 1 N N N N N N -10.772 18.084 64.580 3.343 -1.250 -0.616 O22 B7Y 22 B7Y CL21 CL1 CL 0 0 N N N N N N -12.659 12.959 63.339 8.482 -0.550 -0.326 CL21 B7Y 23 B7Y H1 H1 H 0 1 N N N N N N -8.789 15.597 72.790 -3.974 -1.017 -1.132 H1 B7Y 24 B7Y H2 H2 H 0 1 N N N N N N -10.763 17.527 73.650 -4.599 -0.751 1.844 H2 B7Y 25 B7Y H3 H3 H 0 1 N N N N N N -11.362 16.561 75.810 -5.640 -2.675 -0.285 H3 B7Y 26 B7Y H4 H4 H 0 1 N N N N N N -12.152 15.736 74.424 -6.030 -2.738 1.451 H4 B7Y 27 B7Y H5 H5 H 0 1 N N N N N N -10.760 14.962 75.255 -6.570 -1.357 0.467 H5 B7Y 28 B7Y H6 H6 H 0 1 N N N N N N -9.256 17.633 75.619 -2.418 -1.837 1.381 H6 B7Y 29 B7Y H7 H7 H 0 1 N N N N N N -8.298 16.296 74.899 -3.605 -3.018 1.985 H7 B7Y 30 B7Y H8 H8 H 0 1 N N N N N N -8.451 17.860 74.029 -3.215 -2.956 0.250 H8 B7Y 31 B7Y H9 H9 H 0 1 N N N N N N -13.622 13.571 72.936 -8.419 0.704 -1.156 H9 B7Y 32 B7Y H10 H10 H 0 1 N N N N N N -12.132 12.606 72.662 -7.564 1.768 -0.013 H10 B7Y 33 B7Y H11 H11 H 0 1 N N N N N N -12.214 13.760 74.036 -7.174 1.830 -1.748 H11 B7Y 34 B7Y H12 H12 H 0 1 N N N N N N -8.447 19.087 70.053 -1.403 2.157 0.895 H12 B7Y 35 B7Y H13 H13 H 0 1 N N N N N N -8.548 20.565 68.115 0.685 3.345 1.410 H13 B7Y 36 B7Y H14 H14 H 0 1 N N N N N N -9.673 19.868 66.046 2.856 2.295 0.942 H14 B7Y 37 B7Y H15 H15 H 0 1 N N N N N N -12.915 16.744 66.089 4.605 1.528 -0.372 H15 B7Y 38 B7Y H16 H16 H 0 1 N N N N N N -11.554 15.679 66.580 4.611 0.812 1.257 H16 B7Y 39 B7Y H17 H17 H 0 1 N N N N N N -11.231 15.627 63.845 5.741 -1.207 0.367 H17 B7Y 40 B7Y H18 H18 H 0 1 N N N N N N -13.008 15.871 63.941 5.736 -0.491 -1.263 H18 B7Y 41 B7Y H19 H19 H 0 1 N N N N N N -13.150 13.904 65.456 7.100 1.406 -0.434 H19 B7Y 42 B7Y H20 H20 H 0 1 N N N N N N -11.389 13.637 65.221 7.106 0.691 1.196 H20 B7Y 43 B7Y H21 H21 H 0 1 N N N N N N -10.691 16.206 67.913 0.849 -1.183 -0.572 H21 B7Y 44 B7Y H22 H22 H 0 1 N N N N N N -9.987 17.913 71.857 -2.886 1.170 0.467 H22 B7Y 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal B7Y CL21 C20 SING N N 1 B7Y C19 C20 SING N N 2 B7Y C19 C18 SING N N 3 B7Y O22 C17 DOUB N N 4 B7Y C17 C18 SING N N 5 B7Y C17 C16 SING N N 6 B7Y C16 C15 DOUB Y N 7 B7Y C16 C23 SING Y N 8 B7Y C15 C14 SING Y N 9 B7Y C23 C12 DOUB Y N 10 B7Y C14 C13 DOUB Y N 11 B7Y C12 C13 SING Y N 12 B7Y C12 C02 SING N N 13 B7Y O01 C02 DOUB N N 14 B7Y C02 N03 SING N N 15 B7Y N03 C04 SING N N 16 B7Y O11 C08 DOUB N N 17 B7Y O09 C08 SING N N 18 B7Y O09 C10 SING N N 19 B7Y C08 C04 SING N N 20 B7Y C04 C05 SING N N 21 B7Y C05 C07 SING N N 22 B7Y C05 C06 SING N N 23 B7Y C04 H1 SING N N 24 B7Y C05 H2 SING N N 25 B7Y C06 H3 SING N N 26 B7Y C06 H4 SING N N 27 B7Y C06 H5 SING N N 28 B7Y C07 H6 SING N N 29 B7Y C07 H7 SING N N 30 B7Y C07 H8 SING N N 31 B7Y C10 H9 SING N N 32 B7Y C10 H10 SING N N 33 B7Y C10 H11 SING N N 34 B7Y C13 H12 SING N N 35 B7Y C14 H13 SING N N 36 B7Y C15 H14 SING N N 37 B7Y C18 H15 SING N N 38 B7Y C18 H16 SING N N 39 B7Y C19 H17 SING N N 40 B7Y C19 H18 SING N N 41 B7Y C20 H19 SING N N 42 B7Y C20 H20 SING N N 43 B7Y C23 H21 SING N N 44 B7Y N03 H22 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor B7Y InChI InChI 1.06 "InChI=1S/C17H22ClNO4/c1-11(2)15(17(22)23-3)19-16(21)13-7-4-6-12(10-13)14(20)8-5-9-18/h4,6-7,10-11,15H,5,8-9H2,1-3H3,(H,19,21)/t15-/m0/s1" B7Y InChIKey InChI 1.06 VVOUIVLXVGNARI-HNNXBMFYSA-N B7Y SMILES_CANONICAL CACTVS 3.385 "COC(=O)[C@@H](NC(=O)c1cccc(c1)C(=O)CCCCl)C(C)C" B7Y SMILES CACTVS 3.385 "COC(=O)[CH](NC(=O)c1cccc(c1)C(=O)CCCCl)C(C)C" B7Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)[C@@H](C(=O)OC)NC(=O)c1cccc(c1)C(=O)CCCCl" B7Y SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)C(C(=O)OC)NC(=O)c1cccc(c1)C(=O)CCCCl" # _pdbx_chem_comp_identifier.comp_id B7Y _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "methyl (2~{S})-2-[[3-(4-chloranylbutanoyl)phenyl]carbonylamino]-3-methyl-butanoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site B7Y "Create component" 2023-05-17 PDBC B7Y "Initial release" 2024-05-15 RCSB B7Y "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id B7Y _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C18 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #