data_BD0 # _chem_comp.id BD0 _chem_comp.name "[(2~{R})-2-[4-[[3,3-bis(fluoranyl)pyrrolidin-1-yl]methyl]phenyl]pyrrolidin-1-yl]-[5-chloranyl-2,4-bis(oxidanyl)phenyl]methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H23 Cl F2 N2 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "1-{4-[(2R)-1-(5-chloro-2,4-dihydroxybenzoyl)pyrrolidin-2-yl]benzyl}-3,3-difluoropyrrolidinium" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-05-11 _chem_comp.pdbx_modified_date 2023-05-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 436.879 _chem_comp.one_letter_code ? _chem_comp.three_letter_code BD0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3HEK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal BD0 C4 C1 C 0 1 Y N N 16.969 -0.410 48.848 3.418 1.060 1.862 C4 BD0 1 BD0 C6 C2 C 0 1 Y N N 16.142 -1.476 49.316 2.887 0.311 0.801 C6 BD0 2 BD0 C7 C3 C 0 1 Y N N 14.778 -1.244 49.658 3.267 0.603 -0.512 C7 BD0 3 BD0 C8 C4 C 0 1 Y N N 14.241 0.059 49.540 4.158 1.622 -0.760 C8 BD0 4 BD0 C10 C5 C 0 1 N N N 16.714 -2.839 49.451 1.934 -0.780 1.071 C10 BD0 5 BD0 N12 N1 N 0 1 N N N 17.031 -3.332 50.739 1.972 -1.906 0.330 N12 BD0 6 BD0 C13 C6 C 0 1 N N N 17.624 -4.665 50.818 2.977 -2.223 -0.700 C13 BD0 7 BD0 C15 C7 C 0 1 N N N 17.880 -3.597 52.956 1.472 -4.093 -0.595 C15 BD0 8 BD0 C17 C8 C 0 1 Y N N 15.741 -2.455 52.805 -0.366 -2.544 0.074 C17 BD0 9 BD0 C20 C9 C 0 1 Y N N 13.321 -2.078 54.304 -2.911 -1.675 -0.569 C20 BD0 10 BD0 C21 C10 C 0 1 N N N 12.060 -1.904 55.118 -4.298 -1.196 -0.915 C21 BD0 11 BD0 C24 C11 C 0 1 N N N 9.044 -0.936 53.216 -4.737 2.418 -0.504 C24 BD0 12 BD0 C28 C12 C 0 1 N N N 9.871 -1.044 55.491 -6.035 0.386 -0.279 C28 BD0 13 BD0 O1 O1 O 0 1 N N N 14.587 2.395 48.958 5.562 3.369 0.042 O1 BD0 14 BD0 C2 C13 C 0 1 Y N N 15.062 1.123 49.081 4.683 2.365 0.294 C2 BD0 15 BD0 C3 C14 C 0 1 Y N N 16.425 0.898 48.730 4.313 2.083 1.601 C3 BD0 16 BD0 O5 O2 O 0 1 N N N 18.287 -0.646 48.516 3.050 0.787 3.139 O5 BD0 17 BD0 CL9 CL1 CL 0 0 N N N 12.595 0.311 49.967 4.628 1.983 -2.391 CL9 BD0 18 BD0 O11 O3 O 0 1 N N N 16.911 -3.459 48.408 1.114 -0.665 1.961 O11 BD0 19 BD0 C14 C15 C 0 1 N N N 17.845 -4.966 52.286 2.977 -3.770 -0.791 C14 BD0 20 BD0 C16 C16 C 0 1 N N R 17.073 -2.625 52.054 1.020 -3.023 0.421 C16 BD0 21 BD0 C18 C17 C 0 1 Y N N 14.687 -3.428 52.760 -0.550 -1.651 -0.965 C18 BD0 22 BD0 C19 C18 C 0 1 Y N N 13.497 -3.242 53.499 -1.822 -1.216 -1.286 C19 BD0 23 BD0 N22 N2 N 0 1 N N N 10.975 -1.105 54.546 -4.601 0.020 -0.150 N22 BD0 24 BD0 C23 C19 C 0 1 N N N 10.399 -1.616 53.288 -3.841 1.177 -0.670 C23 BD0 25 BD0 C25 C20 C 0 1 N N N 8.732 -0.569 54.653 -6.054 1.887 0.108 C25 BD0 26 BD0 F26 F1 F 0 1 N N N 7.569 -1.117 55.070 -7.159 2.533 -0.456 F26 BD0 27 BD0 F27 F2 F 0 1 N N N 8.617 0.766 54.772 -6.050 2.039 1.499 F27 BD0 28 BD0 C29 C21 C 0 1 Y N N 14.354 -1.098 54.350 -2.727 -2.564 0.474 C29 BD0 29 BD0 C30 C22 C 0 1 Y N N 15.552 -1.281 53.610 -1.455 -3.003 0.792 C30 BD0 30 BD0 H1 H1 H 0 1 N N N 14.159 -2.058 50.005 2.862 0.028 -1.332 H1 BD0 31 BD0 H2 H2 H 0 1 N N N 16.942 -5.408 50.379 2.691 -1.787 -1.657 H2 BD0 32 BD0 H3 H3 H 0 1 N N N 18.583 -4.684 50.280 3.959 -1.862 -0.396 H3 BD0 33 BD0 H4 H4 H 0 1 N N N 18.919 -3.249 53.050 0.930 -3.991 -1.535 H4 BD0 34 BD0 H5 H5 H 0 1 N N N 17.421 -3.654 53.954 1.342 -5.094 -0.184 H5 BD0 35 BD0 H6 H6 H 0 1 N N N 11.657 -2.908 55.315 -4.350 -0.977 -1.982 H6 BD0 36 BD0 H7 H7 H 0 1 N N N 12.348 -1.431 56.069 -5.022 -1.972 -0.667 H7 BD0 37 BD0 H8 H8 H 0 1 N N N 9.093 -0.036 52.586 -4.269 3.136 0.170 H8 BD0 38 BD0 H9 H9 H 0 1 N N N 8.284 -1.623 52.816 -4.930 2.878 -1.474 H9 BD0 39 BD0 H10 H10 H 0 1 N N N 9.661 -2.036 55.917 -6.376 0.250 -1.305 H10 BD0 40 BD0 H11 H11 H 0 1 N N N 10.086 -0.334 56.304 -6.645 -0.199 0.409 H11 BD0 41 BD0 H12 H12 H 0 1 N N N 13.674 2.419 49.219 5.145 4.230 -0.098 H12 BD0 42 BD0 H13 H13 H 0 1 N N N 17.039 1.714 48.378 4.723 2.662 2.415 H13 BD0 43 BD0 H14 H14 H 0 1 N N N 18.488 -1.564 48.651 3.613 0.135 3.579 H14 BD0 44 BD0 H15 H15 H 0 1 N N N 17.020 -5.574 52.687 3.324 -4.104 -1.769 H15 BD0 45 BD0 H16 H16 H 0 1 N N N 18.797 -5.496 52.435 3.577 -4.208 0.006 H16 BD0 46 BD0 H17 H17 H 0 1 N N N 17.594 -1.660 51.970 1.028 -3.436 1.429 H17 BD0 47 BD0 H18 H18 H 0 1 N N N 14.805 -4.314 52.153 0.301 -1.292 -1.525 H18 BD0 48 BD0 H19 H19 H 0 1 N N N 12.716 -3.986 53.454 -1.965 -0.518 -2.098 H19 BD0 49 BD0 H21 H21 H 0 1 N N N 10.288 -2.710 53.322 -3.608 1.025 -1.724 H21 BD0 50 BD0 H22 H22 H 0 1 N N N 11.025 -1.337 52.427 -2.921 1.304 -0.098 H22 BD0 51 BD0 H23 H23 H 0 1 N N N 14.225 -0.210 54.951 -3.577 -2.915 1.041 H23 BD0 52 BD0 H24 H24 H 0 1 N N N 16.328 -0.531 53.653 -1.313 -3.704 1.600 H24 BD0 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BD0 O11 C10 DOUB N N 1 BD0 O5 C4 SING N N 2 BD0 C3 C4 DOUB Y N 3 BD0 C3 C2 SING Y N 4 BD0 C4 C6 SING Y N 5 BD0 O1 C2 SING N N 6 BD0 C2 C8 DOUB Y N 7 BD0 C6 C10 SING N N 8 BD0 C6 C7 DOUB Y N 9 BD0 C10 N12 SING N N 10 BD0 C8 C7 SING Y N 11 BD0 C8 CL9 SING N N 12 BD0 N12 C13 SING N N 13 BD0 N12 C16 SING N N 14 BD0 C13 C14 SING N N 15 BD0 C16 C17 SING N N 16 BD0 C16 C15 SING N N 17 BD0 C14 C15 SING N N 18 BD0 C18 C17 DOUB Y N 19 BD0 C18 C19 SING Y N 20 BD0 C17 C30 SING Y N 21 BD0 C24 C23 SING N N 22 BD0 C24 C25 SING N N 23 BD0 C23 N22 SING N N 24 BD0 C19 C20 DOUB Y N 25 BD0 C30 C29 DOUB Y N 26 BD0 C20 C29 SING Y N 27 BD0 C20 C21 SING N N 28 BD0 N22 C21 SING N N 29 BD0 N22 C28 SING N N 30 BD0 C25 F27 SING N N 31 BD0 C25 F26 SING N N 32 BD0 C25 C28 SING N N 33 BD0 C7 H1 SING N N 34 BD0 C13 H2 SING N N 35 BD0 C13 H3 SING N N 36 BD0 C15 H4 SING N N 37 BD0 C15 H5 SING N N 38 BD0 C21 H6 SING N N 39 BD0 C21 H7 SING N N 40 BD0 C24 H8 SING N N 41 BD0 C24 H9 SING N N 42 BD0 C28 H10 SING N N 43 BD0 C28 H11 SING N N 44 BD0 O1 H12 SING N N 45 BD0 C3 H13 SING N N 46 BD0 O5 H14 SING N N 47 BD0 C14 H15 SING N N 48 BD0 C14 H16 SING N N 49 BD0 C16 H17 SING N N 50 BD0 C18 H18 SING N N 51 BD0 C19 H19 SING N N 52 BD0 C23 H21 SING N N 53 BD0 C23 H22 SING N N 54 BD0 C29 H23 SING N N 55 BD0 C30 H24 SING N N 56 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor BD0 InChI InChI 1.06 "InChI=1S/C22H23ClF2N2O3/c23-17-10-16(19(28)11-20(17)29)21(30)27-8-1-2-18(27)15-5-3-14(4-6-15)12-26-9-7-22(24,25)13-26/h3-6,10-11,18,28-29H,1-2,7-9,12-13H2/t18-/m1/s1" BD0 InChIKey InChI 1.06 MKPBMJPMGDZEOP-GOSISDBHSA-N BD0 SMILES_CANONICAL CACTVS 3.385 "Oc1cc(O)c(cc1Cl)C(=O)N2CCC[C@@H]2c3ccc(CN4CCC(F)(F)C4)cc3" BD0 SMILES CACTVS 3.385 "Oc1cc(O)c(cc1Cl)C(=O)N2CCC[CH]2c3ccc(CN4CCC(F)(F)C4)cc3" BD0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1CN2CCC(C2)(F)F)[C@H]3CCCN3C(=O)c4cc(c(cc4O)O)Cl" BD0 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1CN2CCC(C2)(F)F)C3CCCN3C(=O)c4cc(c(cc4O)O)Cl" # _pdbx_chem_comp_identifier.comp_id BD0 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{R})-2-[4-[[3,3-bis(fluoranyl)pyrrolidin-1-yl]methyl]phenyl]pyrrolidin-1-yl]-[5-chloranyl-2,4-bis(oxidanyl)phenyl]methanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site BD0 "Create component" 2009-05-11 RCSB BD0 "Modify aromatic_flag" 2011-06-04 RCSB BD0 "Modify descriptor" 2011-06-04 RCSB BD0 "Modify synonyms" 2020-06-05 PDBE #