data_BDT # _chem_comp.id BDT _chem_comp.name 5-beta-DIHYDROTESTOSTERONE _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H30 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(5beta,8alpha,17beta)-17-hydroxyandrostan-3-one" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-07-15 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 290.440 _chem_comp.one_letter_code ? _chem_comp.three_letter_code BDT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3DOP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal BDT C1 C1 C 0 1 N N N 8.120 18.646 -34.896 2.600 -1.485 0.815 C1 BDT 1 BDT C2 C2 C 0 1 N N N 8.854 17.858 -33.788 3.002 -1.631 -0.656 C2 BDT 2 BDT C3 C3 C 0 1 N N N 8.606 16.356 -33.941 3.644 -0.337 -1.107 C3 BDT 3 BDT O3 O3 O 0 1 N N N 9.500 15.532 -33.857 4.721 -0.336 -1.652 O3 BDT 4 BDT C4 C4 C 0 1 N N N 7.166 15.956 -34.199 2.899 0.956 -0.857 C4 BDT 5 BDT C5 C5 C 0 1 N N R 6.445 16.789 -35.314 2.498 1.013 0.621 C5 BDT 6 BDT C6 C6 C 0 1 N N N 4.957 16.359 -35.466 1.605 2.237 0.846 C6 BDT 7 BDT C7 C7 C 0 1 N N N 4.124 16.782 -34.238 0.365 2.132 -0.045 C7 BDT 8 BDT C8 C8 C 0 1 N N R 4.225 18.298 -33.915 -0.413 0.865 0.311 C8 BDT 9 BDT C9 C9 C 0 1 N N S 5.738 18.699 -33.713 0.486 -0.361 0.083 C9 BDT 10 BDT C10 C10 C 0 1 N N S 6.590 18.333 -35.025 1.715 -0.251 0.984 C10 BDT 11 BDT C11 C11 C 0 1 N N N 5.837 20.222 -33.343 -0.258 -1.661 0.366 C11 BDT 12 BDT C12 C12 C 0 1 N N N 4.991 20.572 -32.074 -1.555 -1.755 -0.455 C12 BDT 13 BDT C13 C13 C 0 1 N N S 3.500 20.183 -32.268 -2.400 -0.544 -0.106 C13 BDT 14 BDT C14 C14 C 0 1 N N S 3.434 18.674 -32.645 -1.622 0.710 -0.589 C14 BDT 15 BDT C15 C15 C 0 1 N N N 1.911 18.398 -32.546 -2.668 1.818 -0.526 C15 BDT 16 BDT C16 C16 C 0 1 N N N 1.460 19.386 -31.431 -4.026 1.113 -0.769 C16 BDT 17 BDT C17 C17 C 0 1 N N S 2.623 20.101 -31.009 -3.718 -0.406 -0.876 C17 BDT 18 BDT O17 O17 O 0 1 N N N 2.296 21.395 -30.513 -4.749 -1.176 -0.256 O17 BDT 19 BDT C18 C18 C 0 1 N N N 2.843 21.155 -33.316 -2.637 -0.478 1.403 C18 BDT 20 BDT C19 C19 C 0 1 N N N 6.107 19.188 -36.242 1.251 -0.158 2.439 C19 BDT 21 BDT H1 H1 H 0 1 N N N 8.224 19.717 -34.670 2.050 -2.372 1.130 H1 BDT 22 BDT H1A H1A H 0 1 N N N 8.581 18.346 -35.849 3.495 -1.377 1.427 H1A BDT 23 BDT H2 H2 H 0 1 N N N 9.934 18.054 -33.862 3.714 -2.450 -0.762 H2 BDT 24 BDT H2A H2A H 0 1 N N N 8.473 18.183 -32.809 2.118 -1.832 -1.260 H2A BDT 25 BDT H4 H4 H 0 1 N N N 7.161 14.901 -34.512 3.545 1.801 -1.094 H4 BDT 26 BDT H4A H4A H 0 1 N N N 6.617 16.141 -33.264 2.006 0.989 -1.480 H4A BDT 27 BDT H5 H5 H 0 1 N N N 6.934 16.582 -36.278 3.392 1.092 1.241 H5 BDT 28 BDT H6 H6 H 0 1 N N N 4.538 16.839 -36.363 1.300 2.277 1.892 H6 BDT 29 BDT H6A H6A H 0 1 N N N 4.918 15.263 -35.553 2.158 3.142 0.594 H6A BDT 30 BDT H7 H7 H 0 1 N N N 3.069 16.544 -34.441 -0.270 3.004 0.112 H7 BDT 31 BDT H7A H7A H 0 1 N N N 4.522 16.236 -33.370 0.672 2.088 -1.090 H7A BDT 32 BDT H8 H8 H 0 1 N N N 3.790 18.845 -34.765 -0.722 0.904 1.356 H8 BDT 33 BDT H9 H9 H 0 1 N N N 6.168 18.125 -32.879 0.811 -0.372 -0.958 H9 BDT 34 BDT H11 H11 H 0 1 N N N 6.890 20.468 -33.142 0.386 -2.503 0.114 H11 BDT 35 BDT H11A H11A H 0 0 N N N 5.442 20.805 -34.188 -0.504 -1.707 1.427 H11A BDT 36 BDT H12 H12 H 0 1 N N N 5.394 20.019 -31.213 -1.321 -1.750 -1.520 H12 BDT 37 BDT H12A H12A H 0 0 N N N 5.049 21.657 -31.904 -2.092 -2.668 -0.197 H12A BDT 38 BDT H14 H14 H 0 1 N N N 3.976 17.978 -31.988 -1.297 0.568 -1.620 H14 BDT 39 BDT H15 H15 H 0 1 N N N 1.397 18.593 -33.499 -2.658 2.291 0.456 H15 BDT 40 BDT H15A H15A H 0 0 N N N 1.673 17.348 -32.320 -2.482 2.558 -1.305 H15A BDT 41 BDT H16 H16 H 0 1 N N N 0.705 20.083 -31.822 -4.699 1.300 0.068 H16 BDT 42 BDT H16A H16A H 0 0 N N N 1.007 18.844 -30.588 -4.473 1.471 -1.696 H16A BDT 43 BDT H17 H17 H 0 1 N N N 3.137 19.599 -30.176 -3.589 -0.700 -1.918 H17 BDT 44 BDT HO17 HO17 H 0 0 N N N 2.223 21.363 -29.566 -5.604 -1.123 -0.704 HO17 BDT 45 BDT H18 H18 H 0 1 N N N 2.690 22.142 -32.855 -1.680 -0.391 1.918 H18 BDT 46 BDT H18A H18A H 0 0 N N N 3.506 21.256 -34.188 -3.255 0.390 1.637 H18A BDT 47 BDT H18B H18B H 0 0 N N N 1.874 20.746 -33.638 -3.145 -1.384 1.732 H18B BDT 48 BDT H19 H19 H 0 1 N N N 5.994 20.237 -35.932 2.119 -0.077 3.093 H19 BDT 49 BDT H19A H19A H 0 0 N N N 6.848 19.124 -37.052 0.619 0.722 2.563 H19A BDT 50 BDT H19B H19B H 0 0 N N N 5.139 18.805 -36.598 0.683 -1.052 2.697 H19B BDT 51 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BDT C1 C2 SING N N 1 BDT C1 C10 SING N N 2 BDT C2 C3 SING N N 3 BDT C3 O3 DOUB N N 4 BDT C3 C4 SING N N 5 BDT C4 C5 SING N N 6 BDT C5 C6 SING N N 7 BDT C5 C10 SING N N 8 BDT C6 C7 SING N N 9 BDT C7 C8 SING N N 10 BDT C8 C9 SING N N 11 BDT C8 C14 SING N N 12 BDT C9 C10 SING N N 13 BDT C9 C11 SING N N 14 BDT C10 C19 SING N N 15 BDT C11 C12 SING N N 16 BDT C12 C13 SING N N 17 BDT C13 C14 SING N N 18 BDT C13 C17 SING N N 19 BDT C13 C18 SING N N 20 BDT C14 C15 SING N N 21 BDT C15 C16 SING N N 22 BDT C16 C17 SING N N 23 BDT C17 O17 SING N N 24 BDT C1 H1 SING N N 25 BDT C1 H1A SING N N 26 BDT C2 H2 SING N N 27 BDT C2 H2A SING N N 28 BDT C4 H4 SING N N 29 BDT C4 H4A SING N N 30 BDT C5 H5 SING N N 31 BDT C6 H6 SING N N 32 BDT C6 H6A SING N N 33 BDT C7 H7 SING N N 34 BDT C7 H7A SING N N 35 BDT C8 H8 SING N N 36 BDT C9 H9 SING N N 37 BDT C11 H11 SING N N 38 BDT C11 H11A SING N N 39 BDT C12 H12 SING N N 40 BDT C12 H12A SING N N 41 BDT C14 H14 SING N N 42 BDT C15 H15 SING N N 43 BDT C15 H15A SING N N 44 BDT C16 H16 SING N N 45 BDT C16 H16A SING N N 46 BDT C17 H17 SING N N 47 BDT O17 HO17 SING N N 48 BDT C18 H18 SING N N 49 BDT C18 H18A SING N N 50 BDT C18 H18B SING N N 51 BDT C19 H19 SING N N 52 BDT C19 H19A SING N N 53 BDT C19 H19B SING N N 54 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor BDT SMILES ACDLabs 10.04 "O=C2CC1CCC3C(C1(C)CC2)CCC4(C3CCC4O)C" BDT SMILES_CANONICAL CACTVS 3.341 "C[C@]12CC[C@H]3[C@@H](CC[C@@H]4CC(=O)CC[C@]34C)[C@@H]1CC[C@@H]2O" BDT SMILES CACTVS 3.341 "C[C]12CC[CH]3[CH](CC[CH]4CC(=O)CC[C]34C)[CH]1CC[CH]2O" BDT SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@]12CCC(=O)C[C@H]1CC[C@@H]3[C@@H]2CC[C@]4([C@H]3CC[C@@H]4O)C" BDT SMILES "OpenEye OEToolkits" 1.5.0 "CC12CCC(=O)CC1CCC3C2CCC4(C3CCC4O)C" BDT InChI InChI 1.03 "InChI=1S/C19H30O2/c1-18-9-7-13(20)11-12(18)3-4-14-15-5-6-17(21)19(15,2)10-8-16(14)18/h12,14-17,21H,3-11H2,1-2H3/t12-,14+,15+,16+,17+,18+,19+/m1/s1" BDT InChIKey InChI 1.03 NVKAWKQGWWIWPM-MISPCMORSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BDT "SYSTEMATIC NAME" ACDLabs 10.04 "(5beta,8alpha,17beta)-17-hydroxyandrostan-3-one" BDT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(5R,8R,9S,10S,13S,14S,17S)-17-hydroxy-10,13-dimethyl-1,2,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthren-3-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site BDT "Create component" 2008-07-15 PDBJ BDT "Modify descriptor" 2011-06-04 RCSB BDT "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id BDT _pdbx_chem_comp_synonyms.name "(5beta,8alpha,17beta)-17-hydroxyandrostan-3-one" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##