data_BGL # _chem_comp.id BGL _chem_comp.name 2-O-octyl-beta-D-glucopyranose _chem_comp.type "D-saccharide, beta linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C14 H28 O6" _chem_comp.mon_nstd_parent_comp_id BGC _chem_comp.pdbx_synonyms "2-O-octyl-beta-D-glucose; 2-O-octyl-D-glucose; 2-O-octyl-glucose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 292.369 _chem_comp.one_letter_code ? _chem_comp.three_letter_code BGL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1TAQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 BGL 2-O-octyl-beta-D-glucose PDB ? 2 BGL 2-O-octyl-D-glucose PDB ? 3 BGL 2-O-octyl-glucose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal BGL C1 C1 C 0 1 N N R -22.890 57.557 56.678 0.992 -0.437 -2.112 C1 BGL 1 BGL O1 O1 O 0 1 N Y N -21.870 57.866 55.837 1.984 -0.195 -1.113 O1 BGL 2 BGL C2 C2 C 0 1 N N R -23.796 58.758 56.963 -0.368 0.046 -1.605 C2 BGL 3 BGL O2 O2 O 0 1 N N N -22.986 59.817 57.464 -0.700 -0.641 -0.398 O2 BGL 4 BGL C3 C3 C 0 1 N N S -24.850 58.239 57.975 -1.431 -0.243 -2.670 C3 BGL 5 BGL O3 O3 O 0 1 N N N -25.733 59.155 58.534 -2.679 0.335 -2.281 O3 BGL 6 BGL C4 C4 C 0 1 N N S -25.589 57.085 57.249 -0.973 0.366 -4.000 C4 BGL 7 BGL O4 O4 O 0 1 N N N -26.769 56.627 57.806 -1.874 -0.018 -5.041 O4 BGL 8 BGL C5 C5 C 0 1 N N R -24.495 55.934 57.056 0.432 -0.141 -4.326 C5 BGL 9 BGL O5 O5 O 0 1 N N N -23.627 56.498 56.044 1.341 0.264 -3.304 O5 BGL 10 BGL C6 C6 C 0 1 N N N -24.762 54.414 56.771 0.883 0.439 -5.668 C6 BGL 11 BGL O6 O6 O 0 1 N N N -25.420 53.981 55.590 2.193 -0.038 -5.977 O6 BGL 12 BGL "C1'" "C1'" C 0 1 N N N -22.136 60.484 56.505 -0.181 0.141 0.679 "C1'" BGL 13 BGL "C2'" "C2'" C 0 1 N N N -21.415 61.664 56.990 -0.504 -0.543 2.008 "C2'" BGL 14 BGL "C3'" "C3'" C 0 1 N N N -20.163 61.961 56.171 0.051 0.294 3.161 "C3'" BGL 15 BGL "C4'" "C4'" C 0 1 N N N -19.343 63.075 56.790 -0.271 -0.389 4.491 "C4'" BGL 16 BGL "C5'" "C5'" C 0 1 N N N -18.165 63.421 55.922 0.284 0.448 5.644 "C5'" BGL 17 BGL "C6'" "C6'" C 0 1 N N N -17.329 62.228 55.507 -0.038 -0.236 6.974 "C6'" BGL 18 BGL "C7'" "C7'" C 0 1 N N N -15.926 62.690 55.179 0.517 0.601 8.127 "C7'" BGL 19 BGL "C8'" "C8'" C 0 1 N N N -15.200 61.606 54.531 0.193 -0.082 9.457 "C8'" BGL 20 BGL H1 H1 H 0 1 N N N -22.489 57.244 57.670 0.942 -1.505 -2.323 H1 BGL 21 BGL HO1 HO1 H 0 1 N Y N -21.307 57.120 55.660 2.825 -0.514 -1.471 HO1 BGL 22 BGL H2 H2 H 0 1 N N N -24.321 59.168 56.069 -0.326 1.118 -1.415 H2 BGL 23 BGL H3 H3 H 0 1 N N N -24.299 57.920 58.890 -1.548 -1.321 -2.784 H3 BGL 24 BGL HO3 HO3 H 0 1 N Y N -26.378 58.837 59.154 -3.311 0.135 -2.985 HO3 BGL 25 BGL H4 H4 H 0 1 N N N -25.984 57.479 56.283 -0.958 1.453 -3.915 H4 BGL 26 BGL HO4 HO4 H 0 1 N Y N -27.221 55.920 57.361 -1.545 0.382 -5.857 HO4 BGL 27 BGL H5 H5 H 0 1 N N N -24.146 55.741 58.097 0.419 -1.229 -4.388 H5 BGL 28 BGL H61 H61 H 0 1 N N N -23.786 53.877 56.835 0.189 0.129 -6.449 H61 BGL 29 BGL H62 H62 H 0 1 N N N -25.314 53.994 57.643 0.898 1.527 -5.606 H62 BGL 30 BGL HO6 HO6 H 0 1 N Y N -25.581 53.060 55.417 2.439 0.349 -6.828 HO6 BGL 31 BGL "H1'1" "H1'1" H 0 0 N N N -21.414 59.754 56.068 -0.635 1.132 0.660 "H1'1" BGL 32 BGL "H1'2" "H1'2" H 0 0 N N N -22.727 60.749 55.597 0.899 0.235 0.571 "H1'2" BGL 33 BGL "H2'1" "H2'1" H 0 0 N N N -22.085 62.553 57.034 -0.050 -1.533 2.027 "H2'1" BGL 34 BGL "H2'2" "H2'2" H 0 0 N N N -21.172 61.568 58.074 -1.585 -0.636 2.115 "H2'2" BGL 35 BGL "H3'1" "H3'1" H 0 0 N N N -19.550 61.042 56.015 -0.402 1.285 3.143 "H3'1" BGL 36 BGL "H3'2" "H3'2" H 0 0 N N N -20.415 62.183 55.107 1.132 0.388 3.054 "H3'2" BGL 37 BGL "H4'1" "H4'1" H 0 0 N N N -19.967 63.971 57.012 0.182 -1.380 4.510 "H4'1" BGL 38 BGL "H4'2" "H4'2" H 0 0 N N N -19.028 62.825 57.830 -1.352 -0.483 4.598 "H4'2" BGL 39 BGL "H5'1" "H5'1" H 0 0 N N N -18.495 63.996 55.026 -0.170 1.439 5.626 "H5'1" BGL 40 BGL "H5'2" "H5'2" H 0 0 N N N -17.528 64.190 56.417 1.365 0.542 5.537 "H5'2" BGL 41 BGL "H6'1" "H6'1" H 0 0 N N N -17.338 61.418 56.273 0.415 -1.226 6.993 "H6'1" BGL 42 BGL "H6'2" "H6'2" H 0 0 N N N -17.793 61.658 54.668 -1.119 -0.329 7.081 "H6'2" BGL 43 BGL "H7'1" "H7'1" H 0 0 N N N -15.920 63.624 54.570 0.062 1.592 8.108 "H7'1" BGL 44 BGL "H7'2" "H7'2" H 0 0 N N N -15.389 63.080 56.075 1.597 0.695 8.020 "H7'2" BGL 45 BGL "H8'1" "H8'1" H 0 0 N N N -14.166 61.946 54.289 0.589 0.514 10.278 "H8'1" BGL 46 BGL "H8'2" "H8'2" H 0 0 N N N -15.205 60.671 55.139 -0.886 -0.176 9.564 "H8'2" BGL 47 BGL "H8'3" "H8'3" H 0 0 N N N -15.736 61.215 53.634 0.648 -1.073 9.476 "H8'3" BGL 48 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BGL C1 O1 SING N N 1 BGL C1 C2 SING N N 2 BGL C1 O5 SING N N 3 BGL C1 H1 SING N N 4 BGL O1 HO1 SING N N 5 BGL C2 O2 SING N N 6 BGL C2 C3 SING N N 7 BGL C2 H2 SING N N 8 BGL O2 "C1'" SING N N 9 BGL C3 O3 SING N N 10 BGL C3 C4 SING N N 11 BGL C3 H3 SING N N 12 BGL O3 HO3 SING N N 13 BGL C4 O4 SING N N 14 BGL C4 C5 SING N N 15 BGL C4 H4 SING N N 16 BGL O4 HO4 SING N N 17 BGL C5 O5 SING N N 18 BGL C5 C6 SING N N 19 BGL C5 H5 SING N N 20 BGL C6 O6 SING N N 21 BGL C6 H61 SING N N 22 BGL C6 H62 SING N N 23 BGL O6 HO6 SING N N 24 BGL "C1'" "C2'" SING N N 25 BGL "C1'" "H1'1" SING N N 26 BGL "C1'" "H1'2" SING N N 27 BGL "C2'" "C3'" SING N N 28 BGL "C2'" "H2'1" SING N N 29 BGL "C2'" "H2'2" SING N N 30 BGL "C3'" "C4'" SING N N 31 BGL "C3'" "H3'1" SING N N 32 BGL "C3'" "H3'2" SING N N 33 BGL "C4'" "C5'" SING N N 34 BGL "C4'" "H4'1" SING N N 35 BGL "C4'" "H4'2" SING N N 36 BGL "C5'" "C6'" SING N N 37 BGL "C5'" "H5'1" SING N N 38 BGL "C5'" "H5'2" SING N N 39 BGL "C6'" "C7'" SING N N 40 BGL "C6'" "H6'1" SING N N 41 BGL "C6'" "H6'2" SING N N 42 BGL "C7'" "C8'" SING N N 43 BGL "C7'" "H7'1" SING N N 44 BGL "C7'" "H7'2" SING N N 45 BGL "C8'" "H8'1" SING N N 46 BGL "C8'" "H8'2" SING N N 47 BGL "C8'" "H8'3" SING N N 48 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor BGL SMILES ACDLabs 10.04 "O(CCCCCCCC)C1C(O)C(O)C(OC1O)CO" BGL SMILES_CANONICAL CACTVS 3.341 "CCCCCCCCO[C@H]1[C@H](O)O[C@H](CO)[C@@H](O)[C@@H]1O" BGL SMILES CACTVS 3.341 "CCCCCCCCO[CH]1[CH](O)O[CH](CO)[CH](O)[CH]1O" BGL SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCCCCCCCO[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O" BGL SMILES "OpenEye OEToolkits" 1.5.0 "CCCCCCCCOC1C(C(C(OC1O)CO)O)O" BGL InChI InChI 1.03 "InChI=1S/C14H28O6/c1-2-3-4-5-6-7-8-19-13-12(17)11(16)10(9-15)20-14(13)18/h10-18H,2-9H2,1H3/t10-,11-,12+,13-,14-/m1/s1" BGL InChIKey InChI 1.03 BVHPDIWLWHHJPD-RKQHYHRCSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BGL "SYSTEMATIC NAME" ACDLabs 10.04 2-O-octyl-beta-D-glucopyranose BGL "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3R,4S,5S,6R)-6-(hydroxymethyl)-3-octoxy-oxane-2,4,5-triol" BGL "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 b-D-Glcp2octyl # _pdbx_chem_comp_related.comp_id BGL _pdbx_chem_comp_related.related_comp_id BGC _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 BGL C1 BGC C1 "Carbohydrate core" 2 BGL C2 BGC C2 "Carbohydrate core" 3 BGL C3 BGC C3 "Carbohydrate core" 4 BGL C4 BGC C4 "Carbohydrate core" 5 BGL C5 BGC C5 "Carbohydrate core" 6 BGL C6 BGC C6 "Carbohydrate core" 7 BGL O1 BGC O1 "Carbohydrate core" 8 BGL O2 BGC O2 "Carbohydrate core" 9 BGL O3 BGC O3 "Carbohydrate core" 10 BGL O4 BGC O4 "Carbohydrate core" 11 BGL O5 BGC O5 "Carbohydrate core" 12 BGL O6 BGC O6 "Carbohydrate core" 13 BGL H1 BGC H1 "Carbohydrate core" 14 BGL H2 BGC H2 "Carbohydrate core" 15 BGL H3 BGC H3 "Carbohydrate core" 16 BGL H4 BGC H4 "Carbohydrate core" 17 BGL H5 BGC H5 "Carbohydrate core" 18 BGL H61 BGC H61 "Carbohydrate core" 19 BGL H62 BGC H62 "Carbohydrate core" 20 BGL HO1 BGC HO1 "Carbohydrate core" 21 BGL HO3 BGC HO3 "Carbohydrate core" 22 BGL HO4 BGC HO4 "Carbohydrate core" 23 BGL HO6 BGC HO6 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support BGL "CARBOHYDRATE ISOMER" D PDB ? BGL "CARBOHYDRATE RING" pyranose PDB ? BGL "CARBOHYDRATE ANOMER" beta PDB ? BGL "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site BGL "Create component" 1999-07-08 RCSB BGL "Modify descriptor" 2011-06-04 RCSB BGL "Other modification" 2020-07-03 RCSB BGL "Modify parent residue" 2020-07-17 RCSB BGL "Modify name" 2020-07-17 RCSB BGL "Modify synonyms" 2020-07-17 RCSB BGL "Modify linking type" 2020-07-17 RCSB BGL "Modify leaving atom flag" 2020-07-17 RCSB ##