data_BGP # _chem_comp.id BGP _chem_comp.name 6-O-phosphono-beta-D-galactopyranose _chem_comp.type "D-saccharide, beta linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H13 O9 P" _chem_comp.mon_nstd_parent_comp_id GAL _chem_comp.pdbx_synonyms "BETA-GALACTOSE-6-PHOSPHATE; 6-O-phosphono-beta-D-galactose; 6-O-phosphono-D-galactose; 6-O-phosphono-galactose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 260.136 _chem_comp.one_letter_code ? _chem_comp.three_letter_code BGP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4PBG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 BGP BETA-GALACTOSE-6-PHOSPHATE PDB ? 2 BGP 6-O-phosphono-beta-D-galactose PDB ? 3 BGP 6-O-phosphono-D-galactose PDB ? 4 BGP 6-O-phosphono-galactose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal BGP C1 C1 C 0 1 N N R 22.367 121.677 22.395 1.396 0.205 -2.086 C1 BGP 1 BGP C2 C2 C 0 1 N N R 21.706 121.010 23.595 0.351 -0.126 -3.153 C2 BGP 2 BGP C3 C3 C 0 1 N N S 20.240 121.082 23.189 -0.969 0.561 -2.790 C3 BGP 3 BGP C4 C4 C 0 1 N N R 19.791 122.530 23.105 -1.350 0.163 -1.359 C4 BGP 4 BGP C5 C5 C 0 1 N N R 20.808 123.497 22.421 -0.176 0.472 -0.426 C5 BGP 5 BGP C6 C6 C 0 1 N N N 20.838 124.865 23.080 -0.560 0.109 1.009 C6 BGP 6 BGP O1 O1 O 0 1 N Y N 23.724 121.433 22.389 2.641 -0.404 -2.433 O1 BGP 7 BGP O2 O2 O 0 1 N N N 22.118 119.664 23.698 0.801 0.344 -4.425 O2 BGP 8 BGP O3 O3 O 0 1 N N N 19.394 120.338 24.049 -1.995 0.143 -3.692 O3 BGP 9 BGP O4 O4 O 0 1 N N N 19.478 123.017 24.407 -1.643 -1.233 -1.311 O4 BGP 10 BGP O5 O5 O 0 1 N N N 22.168 123.074 22.482 0.965 -0.286 -0.819 O5 BGP 11 BGP O6 O6 O 0 1 N N N 19.968 125.736 22.424 0.531 0.404 1.882 O6 BGP 12 BGP P P P 0 1 N N N 19.014 126.393 23.456 0.060 -0.000 3.368 P BGP 13 BGP O1P O1P O 0 1 N N N 17.981 125.345 23.975 -0.268 -1.442 3.406 O1P BGP 14 BGP O2P O2P O 0 1 N N N 19.796 126.964 24.660 1.248 0.306 4.410 O2P BGP 15 BGP O3P O3P O 0 1 N N N 18.263 127.517 22.756 -1.241 0.857 3.770 O3P BGP 16 BGP H1 H1 H 0 1 N N N 21.914 121.264 21.462 1.526 1.286 -2.029 H1 BGP 17 BGP H2 H2 H 0 1 N N N 21.943 121.479 24.578 0.201 -1.205 -3.195 H2 BGP 18 BGP H3 H3 H 0 1 N N N 20.153 120.612 22.181 -0.848 1.642 -2.849 H3 BGP 19 BGP H4 H4 H 0 1 N N N 18.890 122.520 22.447 -2.225 0.731 -1.044 H4 BGP 20 BGP H5 H5 H 0 1 N N N 20.437 123.514 21.369 0.059 1.535 -0.481 H5 BGP 21 BGP H61 H61 H 0 1 N N N 20.622 124.805 24.172 -1.432 0.689 1.309 H61 BGP 22 BGP H62 H62 H 0 1 N N N 21.872 125.276 23.138 -0.794 -0.953 1.064 H62 BGP 23 BGP HO1 HO1 H 0 1 N Y N 24.136 121.848 21.640 3.271 -0.169 -1.738 HO1 BGP 24 BGP HO2 HO2 H 0 1 N Y N 21.705 119.248 24.446 1.632 -0.112 -4.614 HO2 BGP 25 BGP HO3 HO3 H 0 1 N Y N 18.479 120.382 23.795 -1.714 0.412 -4.578 HO3 BGP 26 BGP HO4 HO4 H 0 1 N Y N 19.197 123.923 24.354 -2.386 -1.384 -1.911 HO4 BGP 27 BGP HOP2 HOP2 H 0 0 N N N 19.211 127.366 25.292 0.926 0.050 5.285 HOP2 BGP 28 BGP HOP3 HOP3 H 0 0 N N N 17.678 127.919 23.388 -0.984 1.789 3.733 HOP3 BGP 29 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BGP C1 C2 SING N N 1 BGP C1 O1 SING N N 2 BGP C1 O5 SING N N 3 BGP C1 H1 SING N N 4 BGP C2 C3 SING N N 5 BGP C2 O2 SING N N 6 BGP C2 H2 SING N N 7 BGP C3 C4 SING N N 8 BGP C3 O3 SING N N 9 BGP C3 H3 SING N N 10 BGP C4 C5 SING N N 11 BGP C4 O4 SING N N 12 BGP C4 H4 SING N N 13 BGP C5 C6 SING N N 14 BGP C5 O5 SING N N 15 BGP C5 H5 SING N N 16 BGP C6 O6 SING N N 17 BGP C6 H61 SING N N 18 BGP C6 H62 SING N N 19 BGP O1 HO1 SING N N 20 BGP O2 HO2 SING N N 21 BGP O3 HO3 SING N N 22 BGP O4 HO4 SING N N 23 BGP O6 P SING N N 24 BGP P O1P DOUB N N 25 BGP P O2P SING N N 26 BGP P O3P SING N N 27 BGP O2P HOP2 SING N N 28 BGP O3P HOP3 SING N N 29 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor BGP SMILES ACDLabs 10.04 "O=P(O)(O)OCC1OC(O)C(O)C(O)C1O" BGP SMILES_CANONICAL CACTVS 3.341 "O[C@@H]1O[C@H](CO[P](O)(O)=O)[C@H](O)[C@H](O)[C@H]1O" BGP SMILES CACTVS 3.341 "O[CH]1O[CH](CO[P](O)(O)=O)[CH](O)[CH](O)[CH]1O" BGP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)OP(=O)(O)O" BGP SMILES "OpenEye OEToolkits" 1.5.0 "C(C1C(C(C(C(O1)O)O)O)O)OP(=O)(O)O" BGP InChI InChI 1.03 "InChI=1S/C6H13O9P/c7-3-2(1-14-16(11,12)13)15-6(10)5(9)4(3)8/h2-10H,1H2,(H2,11,12,13)/t2-,3+,4+,5-,6-/m1/s1" BGP InChIKey InChI 1.03 NBSCHQHZLSJFNQ-FPRJBGLDSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BGP "SYSTEMATIC NAME" ACDLabs 10.04 6-O-phosphono-beta-D-galactopyranose BGP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3R,4S,5R,6R)-3,4,5,6-tetrahydroxyoxan-2-yl]methyl dihydrogen phosphate" BGP "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 b-D-Galp6PO3 # _pdbx_chem_comp_related.comp_id BGP _pdbx_chem_comp_related.related_comp_id GAL _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 BGP C1 GAL C1 "Carbohydrate core" 2 BGP C2 GAL C2 "Carbohydrate core" 3 BGP C3 GAL C3 "Carbohydrate core" 4 BGP C4 GAL C4 "Carbohydrate core" 5 BGP C5 GAL C5 "Carbohydrate core" 6 BGP C6 GAL C6 "Carbohydrate core" 7 BGP O1 GAL O1 "Carbohydrate core" 8 BGP O2 GAL O2 "Carbohydrate core" 9 BGP O3 GAL O3 "Carbohydrate core" 10 BGP O4 GAL O4 "Carbohydrate core" 11 BGP O5 GAL O5 "Carbohydrate core" 12 BGP O6 GAL O6 "Carbohydrate core" 13 BGP H1 GAL H1 "Carbohydrate core" 14 BGP H2 GAL H2 "Carbohydrate core" 15 BGP H3 GAL H3 "Carbohydrate core" 16 BGP H4 GAL H4 "Carbohydrate core" 17 BGP H5 GAL H5 "Carbohydrate core" 18 BGP H61 GAL H61 "Carbohydrate core" 19 BGP H62 GAL H62 "Carbohydrate core" 20 BGP HO1 GAL HO1 "Carbohydrate core" 21 BGP HO2 GAL HO2 "Carbohydrate core" 22 BGP HO3 GAL HO3 "Carbohydrate core" 23 BGP HO4 GAL HO4 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support BGP "CARBOHYDRATE ISOMER" D PDB ? BGP "CARBOHYDRATE RING" pyranose PDB ? BGP "CARBOHYDRATE ANOMER" beta PDB ? BGP "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site BGP "Create component" 1999-07-08 RCSB BGP "Modify descriptor" 2011-06-04 RCSB BGP "Other modification" 2020-07-03 RCSB BGP "Modify parent residue" 2020-07-17 RCSB BGP "Modify name" 2020-07-17 RCSB BGP "Modify synonyms" 2020-07-17 RCSB BGP "Modify linking type" 2020-07-17 RCSB BGP "Modify leaving atom flag" 2020-07-17 RCSB ##