data_BHD # _chem_comp.id BHD _chem_comp.name "(3S)-3-hydroxy-L-aspartic acid" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C4 H7 N O5" _chem_comp.mon_nstd_parent_comp_id ASP _chem_comp.pdbx_synonyms "BETA-HYDROXYASPARTIC ACID" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces DOH _chem_comp.formula_weight 149.102 _chem_comp.one_letter_code D _chem_comp.three_letter_code BHD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1ERM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal BHD N N N 0 1 N N N Y Y N 42.035 33.571 18.071 -0.191 -0.405 1.653 N BHD 1 BHD CA CA C 0 1 N N S Y N N 42.411 33.644 19.468 -0.477 0.436 0.482 CA BHD 2 BHD CB CB C 0 1 N N S N N N 41.386 32.650 20.140 0.479 0.068 -0.655 CB BHD 3 BHD OB OB O 0 1 N N N N N N 40.268 32.992 20.028 0.221 -1.272 -1.079 OB BHD 4 BHD CG CG C 0 1 N N N N N N 41.605 32.563 21.613 1.902 0.176 -0.170 CG BHD 5 BHD OD1 OD1 O 0 1 N N N N N N 41.166 31.573 22.101 2.593 -0.812 -0.101 OD1 BHD 6 BHD OD2 OD2 O 0 1 N N N N N N 42.484 33.376 22.186 2.401 1.370 0.185 OD2 BHD 7 BHD C C C 0 1 N N N Y N Y 43.945 33.495 19.701 -1.898 0.210 0.036 C BHD 8 BHD O O O 0 1 N N N Y N Y 44.560 32.581 19.181 -2.484 -0.793 0.370 O BHD 9 BHD OXT OXT O 0 1 N Y N Y N Y 44.558 34.395 20.484 -2.514 1.123 -0.732 OXT BHD 10 BHD H HN1 H 0 1 N N N Y Y N 42.627 34.172 17.534 -0.765 -0.137 2.438 H BHD 11 BHD H2 HN2 H 0 1 N Y N Y Y N 42.134 32.630 17.748 -0.310 -1.382 1.434 H2 BHD 12 BHD HA HA H 0 1 N N N Y N N 42.142 34.647 19.830 -0.340 1.485 0.746 HA BHD 13 BHD HB HB H 0 1 N N N N N N 41.576 31.655 19.710 0.327 0.750 -1.492 HB BHD 14 BHD HOB HOB H 0 1 N N N N N N 39.766 32.686 20.774 0.336 -1.934 -0.384 HOB BHD 15 BHD HD2 HOD H 0 1 N N N N N N 42.708 33.044 23.047 3.319 1.390 0.489 HD2 BHD 16 BHD HXT HXT H 0 1 N Y N Y N Y 45.483 34.188 20.541 -3.426 0.934 -0.992 HXT BHD 17 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BHD N CA SING N N 1 BHD N H SING N N 2 BHD N H2 SING N N 3 BHD CA CB SING N N 4 BHD CA C SING N N 5 BHD CA HA SING N N 6 BHD CB OB SING N N 7 BHD CB CG SING N N 8 BHD CB HB SING N N 9 BHD OB HOB SING N N 10 BHD CG OD1 DOUB N N 11 BHD CG OD2 SING N N 12 BHD OD2 HD2 SING N N 13 BHD C O DOUB N N 14 BHD C OXT SING N N 15 BHD OXT HXT SING N N 16 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor BHD SMILES ACDLabs 12.01 "O=C(O)C(O)C(C(=O)O)N" BHD InChI InChI 1.03 "InChI=1S/C4H7NO5/c5-1(3(7)8)2(6)4(9)10/h1-2,6H,5H2,(H,7,8)(H,9,10)/t1-,2-/m0/s1" BHD InChIKey InChI 1.03 YYLQUHNPNCGKJQ-LWMBPPNESA-N BHD SMILES_CANONICAL CACTVS 3.370 "N[C@@H]([C@H](O)C(O)=O)C(O)=O" BHD SMILES CACTVS 3.370 "N[CH]([CH](O)C(O)=O)C(O)=O" BHD SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "[C@H]([C@@H](C(=O)O)O)(C(=O)O)N" BHD SMILES "OpenEye OEToolkits" 1.7.6 "C(C(C(=O)O)O)(C(=O)O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BHD "SYSTEMATIC NAME" ACDLabs 12.01 "(3S)-3-hydroxy-L-aspartic acid" BHD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S,3S)-2-azanyl-3-oxidanyl-butanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site BHD "Create component" 1999-07-08 RCSB BHD "Modify descriptor" 2011-06-04 RCSB BHD "Modify name" 2012-06-11 RCSB BHD "Modify synonyms" 2021-03-01 PDBE BHD "Modify backbone" 2023-11-03 PDBE BHD "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id BHD _pdbx_chem_comp_synonyms.name "BETA-HYDROXYASPARTIC ACID" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id BHD _pdbx_chem_comp_pcm.modified_residue_id ASP _pdbx_chem_comp_pcm.type Hydroxylation _pdbx_chem_comp_pcm.category "Named protein modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession PTM-0473 _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession PTM-0029 #