data_BLA
#
_chem_comp.id BLA
_chem_comp.name "BILIVERDINE IX ALPHA"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C33 H34 N4 O6"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 582.646
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code BLA
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1BVD
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
BLA CHA CHA C 0 1 N N N N N N 6.266 14.935 29.862 -0.184 -0.603 -2.337 CHA BLA 1
BLA NA "N A" N 0 1 Y N N N N N 5.634 16.539 31.586 1.306 -0.375 -0.376 NA BLA 2
BLA C1A C1A C 0 1 Y N N N N N 5.952 15.257 31.191 1.061 -0.643 -1.706 C1A BLA 3
BLA C2A C2A C 0 1 Y N N N N N 6.023 14.356 32.358 2.282 -0.956 -2.315 C2A BLA 4
BLA C3A C3A C 0 1 Y N N N N N 5.736 15.147 33.423 3.262 -0.885 -1.346 C3A BLA 5
BLA C4A C4A C 0 1 Y N N N N N 5.476 16.497 32.937 2.649 -0.520 -0.146 C4A BLA 6
BLA CMA CMA C 0 1 N N N N N N 5.602 14.725 34.871 4.732 -1.148 -1.548 CMA BLA 7
BLA CAA CAA C 0 1 N N N N N N 6.274 12.847 32.362 2.487 -1.315 -3.764 CAA BLA 8
BLA CBA CBA C 0 1 N N N N N N 7.729 12.467 32.803 2.755 -0.043 -4.572 CBA BLA 9
BLA CGA CGA C 0 1 N N N N N N 8.860 13.225 32.099 2.961 -0.402 -6.021 CGA BLA 10
BLA O1A O1A O 0 1 N N N N N N 9.177 13.092 30.894 2.900 -1.557 -6.372 O1A BLA 11
BLA O2A O2A O 0 1 N N N N N N 9.374 14.302 32.797 3.212 0.560 -6.922 O2A BLA 12
BLA CHB CHB C 0 1 N N N N N N 5.093 17.606 33.710 3.300 -0.334 1.090 CHB BLA 13
BLA NB "N B" N 0 1 N N N N N N 4.446 19.104 31.937 1.646 1.322 1.850 NB BLA 14
BLA C1B C1B C 0 1 N N N N N N 4.668 18.863 33.266 2.751 0.504 2.040 C1B BLA 15
BLA C2B C2B C 0 1 N N N N N N 4.337 20.062 34.099 3.219 0.663 3.359 C2B BLA 16
BLA C3B C3B C 0 1 N N N N N N 3.870 21.021 33.201 2.403 1.589 3.980 C3B BLA 17
BLA C4B C4B C 0 1 N N N N N N 3.938 20.378 31.900 1.394 1.997 2.988 C4B BLA 18
BLA CMB CMB C 0 1 N N N N N N 4.492 20.191 35.612 4.399 -0.041 3.978 CMB BLA 19
BLA OB "O B" O 0 1 N N N N N N 3.568 20.893 30.849 0.496 2.798 3.164 OB BLA 20
BLA CAB CAB C 0 1 N N N N N N 3.391 22.323 33.330 2.517 2.071 5.367 CAB BLA 21
BLA CBB CBB C 0 1 N N N N N N 3.470 23.123 34.468 1.593 2.889 5.865 CBB BLA 22
BLA NC "N C" N 0 1 N N N N N N 6.212 20.200 29.208 -0.968 -1.010 2.432 NC BLA 23
BLA C1C C1C C 0 1 N N N N N N 6.059 21.534 29.567 -0.470 -1.262 3.654 C1C BLA 24
BLA C2C C2C C 0 1 N N N N N N 5.627 22.349 28.469 -1.476 -1.132 4.622 C2C BLA 25
BLA C3C C3C C 0 1 N N N N N N 5.622 21.555 27.377 -2.650 -0.779 3.975 C3C BLA 26
BLA C4C C4C C 0 1 N N N N N N 6.035 20.165 27.853 -2.320 -0.706 2.545 C4C BLA 27
BLA CMC CMC C 0 1 N N N N N N 5.082 23.776 28.656 -1.310 -1.334 6.106 CMC BLA 28
BLA OC "O C" O 0 1 N N N N N N 6.309 22.001 30.684 0.689 -1.559 3.888 OC BLA 29
BLA CAC CAC C 0 1 N N N N N N 5.115 22.038 26.159 -3.964 -0.536 4.594 CAC BLA 30
BLA CBC CBC C 0 1 N N N N N N 5.388 21.606 24.811 -4.521 -1.469 5.360 CBC BLA 31
BLA CHD CHD C 0 1 N N N N N N 6.214 18.985 27.121 -3.172 -0.394 1.526 CHD BLA 32
BLA ND "N D" N 0 1 N N N N N N 6.309 17.207 28.832 -1.427 -0.540 -0.235 ND BLA 33
BLA C1D C1D C 0 1 N N N N N N 6.413 17.670 27.537 -2.692 -0.390 0.146 C1D BLA 34
BLA C2D C2D C 0 1 N N N N N N 6.680 16.558 26.640 -3.495 -0.226 -1.008 C2D BLA 35
BLA C3D C3D C 0 1 N N N N N N 6.687 15.433 27.398 -2.662 -0.278 -2.079 C3D BLA 36
BLA C4D C4D C 0 1 N N N N N N 6.444 15.832 28.764 -1.354 -0.484 -1.571 C4D BLA 37
BLA CMD CMD C 0 1 N N N N N N 6.957 16.628 25.134 -4.988 -0.025 -1.041 CMD BLA 38
BLA CAD CAD C 0 1 N N N N N N 6.774 14.015 26.893 -3.054 -0.152 -3.529 CAD BLA 39
BLA CBD CBD C 0 1 N N N N N N 5.381 13.630 26.327 -3.001 1.319 -3.945 CBD BLA 40
BLA CGD CGD C 0 1 N N N N N N 5.397 12.185 25.859 -3.393 1.445 -5.395 CGD BLA 41
BLA O1D O1D O 0 1 N N N N N N 6.415 11.674 25.377 -3.684 0.459 -6.030 O1D BLA 42
BLA O2D O2D O 0 1 N N N N N N 4.326 11.346 26.015 -3.418 2.653 -5.981 O2D BLA 43
BLA HHA HHA H 0 1 N N N N N N 6.386 13.857 29.657 -0.247 -0.663 -3.413 HHA BLA 44
BLA HA "H A" H 0 1 N N N N N N 5.534 17.362 30.991 0.640 -0.126 0.283 HA BLA 45
BLA HMA1 1HMA H 0 0 N N N N N N 5.366 15.374 35.745 4.940 -2.203 -1.371 HMA1 BLA 46
BLA HMA2 2HMA H 0 0 N N N N N N 4.843 13.908 34.883 5.010 -0.889 -2.570 HMA2 BLA 47
BLA HMA3 3HMA H 0 0 N N N N N N 6.552 14.200 35.126 5.309 -0.541 -0.850 HMA3 BLA 48
BLA HAA1 1HAA H 0 0 N N N N N N 5.518 12.320 32.989 3.340 -1.988 -3.854 HAA1 BLA 49
BLA HAA2 2HAA H 0 0 N N N N N N 6.030 12.401 31.369 1.593 -1.807 -4.147 HAA2 BLA 50
BLA HBA1 1HBA H 0 0 N N N N N N 7.830 12.574 33.908 1.903 0.630 -4.482 HBA1 BLA 51
BLA HBA2 2HBA H 0 0 N N N N N N 7.883 11.368 32.694 3.649 0.448 -4.189 HBA2 BLA 52
BLA H2A H2A H 0 1 N N N N N N 10.075 14.771 32.360 3.344 0.330 -7.852 H2A BLA 53
BLA HHB HHB H 0 1 N N N N N N 5.130 17.472 34.804 4.228 -0.847 1.295 HHB BLA 54
BLA HB "H B" H 0 1 N N N N N N 4.619 18.476 31.152 1.136 1.395 1.028 HB BLA 55
BLA HMB1 1HMB H 0 0 N N N N N N 4.245 21.084 36.232 4.521 0.291 5.008 HMB1 BLA 56
BLA HMB2 2HMB H 0 0 N N N N N N 3.926 19.338 36.056 4.229 -1.117 3.961 HMB2 BLA 57
BLA HMB3 3HMB H 0 0 N N N N N N 5.554 19.939 35.838 5.300 0.193 3.411 HMB3 BLA 58
BLA HAB HAB H 0 1 N N N N N N 2.901 22.763 32.445 3.350 1.760 5.980 HAB BLA 59
BLA HBB1 1HBB H 0 0 N N N N N N 3.959 22.682 35.353 1.723 3.315 6.849 HBB1 BLA 60
BLA HBB2 2HBB H 0 0 N N N N N N 3.090 24.153 34.570 0.714 3.128 5.285 HBB2 BLA 61
BLA HC "H C" H 0 1 N N N N N N 6.413 19.406 29.816 -0.465 -1.038 1.603 HC BLA 62
BLA HMC1 1HMC H 0 0 N N N N N N 4.746 24.409 27.802 -0.258 -1.511 6.332 HMC1 BLA 63
BLA HMC2 2HMC H 0 0 N N N N N N 4.239 23.720 29.384 -1.650 -0.443 6.634 HMC2 BLA 64
BLA HMC3 3HMC H 0 0 N N N N N N 5.847 24.355 29.222 -1.900 -2.193 6.424 HMC3 BLA 65
BLA HAC HAC H 0 1 N N N N N N 4.403 22.872 26.277 -4.476 0.399 4.426 HAC BLA 66
BLA HBC1 1HBC H 0 0 N N N N N N 6.099 20.771 24.692 -5.517 -1.323 5.752 HBC1 BLA 67
BLA HBC2 2HBC H 0 0 N N N N N N 4.990 21.985 23.854 -3.978 -2.374 5.590 HBC2 BLA 68
BLA HHD HHD H 0 1 N N N N N N 6.194 19.113 26.025 -4.202 -0.149 1.740 HHD BLA 69
BLA HMD1 1HMD H 0 0 N N N N N N 7.161 15.774 24.445 -5.377 -0.023 -0.023 HMD1 BLA 70
BLA HMD2 2HMD H 0 0 N N N N N N 6.097 17.182 24.689 -5.217 0.927 -1.519 HMD2 BLA 71
BLA HMD3 3HMD H 0 0 N N N N N N 7.811 17.333 25.011 -5.451 -0.834 -1.605 HMD3 BLA 72
BLA HAD1 1HAD H 0 0 N N N N N N 7.597 13.867 26.155 -2.363 -0.728 -4.144 HAD1 BLA 73
BLA HAD2 2HAD H 0 0 N N N N N N 7.139 13.300 27.667 -4.066 -0.532 -3.667 HAD2 BLA 74
BLA HBD1 1HBD H 0 0 N N N N N N 4.562 13.824 27.059 -3.692 1.895 -3.331 HBD1 BLA 75
BLA HBD2 2HBD H 0 0 N N N N N N 5.047 14.327 25.523 -1.989 1.699 -3.808 HBD2 BLA 76
BLA H2D H2D H 0 1 N N N N N N 4.336 10.442 25.722 -3.669 2.734 -6.911 H2D BLA 77
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BLA CHA C1A SING N N 1
BLA CHA C4D DOUB N Z 2
BLA CHA HHA SING N N 3
BLA NA C1A SING Y N 4
BLA NA C4A SING Y N 5
BLA NA HA SING N N 6
BLA C1A C2A DOUB Y N 7
BLA C2A C3A SING Y N 8
BLA C2A CAA SING N N 9
BLA C3A C4A DOUB Y N 10
BLA C3A CMA SING N N 11
BLA C4A CHB SING N N 12
BLA CMA HMA1 SING N N 13
BLA CMA HMA2 SING N N 14
BLA CMA HMA3 SING N N 15
BLA CAA CBA SING N N 16
BLA CAA HAA1 SING N N 17
BLA CAA HAA2 SING N N 18
BLA CBA CGA SING N N 19
BLA CBA HBA1 SING N N 20
BLA CBA HBA2 SING N N 21
BLA CGA O1A DOUB N N 22
BLA CGA O2A SING N N 23
BLA O2A H2A SING N N 24
BLA CHB C1B DOUB N Z 25
BLA CHB HHB SING N N 26
BLA NB C1B SING N N 27
BLA NB C4B SING N N 28
BLA NB HB SING N N 29
BLA C1B C2B SING N N 30
BLA C2B C3B DOUB N N 31
BLA C2B CMB SING N N 32
BLA C3B C4B SING N N 33
BLA C3B CAB SING N N 34
BLA C4B OB DOUB N N 35
BLA CMB HMB1 SING N N 36
BLA CMB HMB2 SING N N 37
BLA CMB HMB3 SING N N 38
BLA CAB CBB DOUB N N 39
BLA CAB HAB SING N N 40
BLA CBB HBB1 SING N N 41
BLA CBB HBB2 SING N N 42
BLA NC C1C SING N N 43
BLA NC C4C SING N N 44
BLA NC HC SING N N 45
BLA C1C C2C SING N N 46
BLA C1C OC DOUB N N 47
BLA C2C C3C DOUB N N 48
BLA C2C CMC SING N N 49
BLA C3C C4C SING N N 50
BLA C3C CAC SING N N 51
BLA C4C CHD DOUB N Z 52
BLA CMC HMC1 SING N N 53
BLA CMC HMC2 SING N N 54
BLA CMC HMC3 SING N N 55
BLA CAC CBC DOUB N N 56
BLA CAC HAC SING N N 57
BLA CBC HBC1 SING N N 58
BLA CBC HBC2 SING N N 59
BLA CHD C1D SING N N 60
BLA CHD HHD SING N N 61
BLA ND C1D DOUB N N 62
BLA ND C4D SING N N 63
BLA C1D C2D SING N N 64
BLA C2D C3D DOUB N N 65
BLA C2D CMD SING N N 66
BLA C3D C4D SING N N 67
BLA C3D CAD SING N N 68
BLA CMD HMD1 SING N N 69
BLA CMD HMD2 SING N N 70
BLA CMD HMD3 SING N N 71
BLA CAD CBD SING N N 72
BLA CAD HAD1 SING N N 73
BLA CAD HAD2 SING N N 74
BLA CBD CGD SING N N 75
BLA CBD HBD1 SING N N 76
BLA CBD HBD2 SING N N 77
BLA CGD O1D DOUB N N 78
BLA CGD O2D SING N N 79
BLA O2D H2D SING N N 80
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
BLA SMILES_CANONICAL CACTVS 3.341 "Cc1c([nH]c(\C=C2/N=C(\C=C3/NC(=O)C(=C3C=C)C)C(=C2CCC(O)=O)C)c1CCC(O)=O)\C=C4/NC(=O)C(=C4C)C=C"
BLA SMILES CACTVS 3.341 "Cc1c([nH]c(C=C2N=C(C=C3NC(=O)C(=C3C=C)C)C(=C2CCC(O)=O)C)c1CCC(O)=O)C=C4NC(=O)C(=C4C)C=C"
BLA SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "Cc1c(c([nH]c1\C=C/2\C(=C(C(=O)N2)C=C)C)\C=C/3\C(=C(C(=N3)\C=C/4\C(=C(C(=O)N4)C)C=C)C)CCC(=O)O)CCC(=O)O"
BLA SMILES "OpenEye OEToolkits" 1.5.0 "Cc1c(c([nH]c1C=C2C(=C(C(=O)N2)C=C)C)C=C3C(=C(C(=N3)C=C4C(=C(C(=O)N4)C)C=C)C)CCC(=O)O)CCC(=O)O"
BLA InChI InChI 1.03 "InChI=1S/C33H34N4O6/c1-7-20-19(6)32(42)37-27(20)14-25-18(5)23(10-12-31(40)41)29(35-25)15-28-22(9-11-30(38)39)17(4)24(34-28)13-26-16(3)21(8-2)33(43)36-26/h7-8,13-15,34H,1-2,9-12H2,3-6H3,(H,36,43)(H,37,42)(H,38,39)(H,40,41)/b26-13-,27-14-,29-15-"
BLA InChIKey InChI 1.03 GWZYPXHJIZCRAJ-SRVCBVSDSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BLA "SYSTEMATIC NAME" ACD-LABS 4.04 "3-{2-((Z)-{3-(2-carboxyethyl)-4-methyl-5-[(Z)-(4-methyl-5-oxo-3-vinyl-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-2H-pyrrol-2-ylidene}methyl)-4-methyl-5-[(Z)-(3-methyl-5-oxo-4-vinyl-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-1H-pyrrol-3-yl}propanoic acid"
BLA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(3-ethenyl-4-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-2-ylidene]methyl]-5-[(Z)-(4-ethenyl-3-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
BLA "Create component" 1999-07-08 RCSB
BLA "Modify descriptor" 2011-06-04 RCSB
BLA "Modify PCM" 2024-09-27 PDBE
#
loop_
_pdbx_chem_comp_pcm.pcm_id
_pdbx_chem_comp_pcm.comp_id
_pdbx_chem_comp_pcm.modified_residue_id
_pdbx_chem_comp_pcm.type
_pdbx_chem_comp_pcm.category
_pdbx_chem_comp_pcm.position
_pdbx_chem_comp_pcm.polypeptide_position
_pdbx_chem_comp_pcm.comp_id_linking_atom
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession
1 BLA CYS None "Covalent chemical modification" "Amino-acid side chain" "Any position" CAC SG ? ?
2 BLA CYS None "Covalent chemical modification" "Amino-acid side chain" "Any position" CBC SG ? ?
#