data_BMB # _chem_comp.id BMB _chem_comp.name "(3S,6S,7R,9aS)-7-[2-(benzylamino)ethyl]-N-(diphenylmethyl)-6-{[(2S)-2-(methylamino)butanoyl]amino}-5-oxooctahydro-1H-pyrrolo[1,2-a]azepine-3-carboxamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C37 H47 N5 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-10-06 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 609.801 _chem_comp.one_letter_code ? _chem_comp.three_letter_code BMB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3OZ1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal BMB C C C 0 1 N N N -0.113 -44.887 26.931 1.240 2.823 -0.614 C BMB 1 BMB N N N 0 1 N N N 1.319 -42.895 26.992 1.519 5.237 -0.607 N BMB 2 BMB O O O 0 1 N N N -0.157 -45.208 25.745 1.170 2.873 -1.824 O BMB 3 BMB CA CA C 0 1 N N S -0.015 -43.421 27.341 1.103 4.083 0.201 CA BMB 4 BMB CB CB C 0 1 N N N -1.164 -42.621 26.692 -0.356 4.258 0.628 CB BMB 5 BMB CAA CAA C 0 1 N N N -2.534 -43.324 26.820 -0.474 5.467 1.558 CAA BMB 6 BMB CAB CAB C 0 1 N N N 1.465 -42.729 25.530 2.976 5.415 -0.561 CAB BMB 7 BMB OAD OAD O 0 1 N N N -2.587 -50.020 30.026 -2.550 0.327 -0.041 OAD BMB 8 BMB OAE OAE O 0 1 N N N -2.468 -47.002 28.657 -0.408 0.343 -2.035 OAE BMB 9 BMB CAF CAF C 0 1 Y N N 7.625 -43.275 27.206 11.184 -1.030 -0.394 CAF BMB 10 BMB CAG CAG C 0 1 Y N N -8.531 -48.272 32.840 -8.582 -1.301 -2.691 CAG BMB 11 BMB CAH CAH C 0 1 Y N N -4.869 -54.638 31.386 -6.161 -0.440 3.794 CAH BMB 12 BMB CAI CAI C 0 1 Y N N 7.898 -43.652 28.524 10.595 -0.591 0.777 CAI BMB 13 BMB CAJ CAJ C 0 1 Y N N 6.385 -43.597 26.630 10.460 -1.799 -1.286 CAJ BMB 14 BMB CAK CAK C 0 1 Y N N -7.479 -47.557 32.266 -8.253 0.030 -2.512 CAK BMB 15 BMB CAL CAL C 0 1 Y N N -8.485 -49.672 32.869 -7.807 -2.288 -2.113 CAL BMB 16 BMB CAM CAM C 0 1 Y N N -3.863 -53.847 31.943 -6.139 0.781 3.146 CAM BMB 17 BMB CAN CAN C 0 1 Y N N -5.958 -54.043 30.745 -5.859 -1.597 3.099 CAN BMB 18 BMB CAO CAO C 0 1 Y N N 6.896 -44.306 29.254 9.283 -0.924 1.058 CAO BMB 19 BMB CAP CAP C 0 1 Y N N 5.400 -44.281 27.355 9.148 -2.132 -1.005 CAP BMB 20 BMB CAQ CAQ C 0 1 Y N N -6.379 -48.247 31.749 -7.148 0.373 -1.756 CAQ BMB 21 BMB CAR CAR C 0 1 Y N N -7.384 -50.357 32.355 -6.701 -1.945 -1.357 CAR BMB 22 BMB CAS CAS C 0 1 Y N N -3.958 -52.460 31.863 -5.817 0.846 1.804 CAS BMB 23 BMB CAT CAT C 0 1 Y N N -6.055 -52.655 30.659 -5.538 -1.532 1.756 CAT BMB 24 BMB CAV CAV C 0 1 N N N 3.118 -47.178 29.161 4.829 -1.349 0.207 CAV BMB 25 BMB CAW CAW C 0 1 N N N 1.629 -47.356 29.487 3.931 -0.256 -0.375 CAW BMB 26 BMB CAX CAX C 0 1 N N N 0.449 -49.454 28.653 2.225 -0.552 1.428 CAX BMB 27 BMB CAY CAY C 0 1 N N N 0.045 -50.243 27.393 0.756 -0.794 1.759 CAY BMB 28 BMB CAZ CAZ C 0 1 N N N -2.234 -51.169 26.967 -1.015 -2.531 1.417 CAZ BMB 29 BMB CBA CBA C 0 1 N N N -3.649 -50.586 26.999 -1.785 -2.987 0.158 CBA BMB 30 BMB CBB CBB C 0 1 N N N 4.612 -45.401 29.528 7.129 -2.058 0.472 CBB BMB 31 BMB NBD NBD N 0 1 N N N 3.418 -45.798 28.759 6.235 -1.027 -0.073 NBD BMB 32 BMB NBE NBE N 0 1 N N N -0.156 -45.746 27.936 1.436 1.640 0.001 NBE BMB 33 BMB NBF NBF N 0 1 N N N -4.848 -49.943 29.794 -4.072 -1.172 -0.641 NBF BMB 34 BMB CBH CBH C 0 1 N N N -3.596 -49.807 29.353 -2.794 -0.789 -0.449 CBH BMB 35 BMB CBI CBI C 0 1 N N N -1.676 -47.712 28.037 0.202 -0.137 -1.097 CBI BMB 36 BMB CBJ CBJ C 0 1 Y N N 5.664 -44.660 28.676 8.559 -1.694 0.166 CBJ BMB 37 BMB CBK CBK C 0 1 Y N N -6.327 -49.646 31.782 -6.372 -0.614 -1.179 CBK BMB 38 BMB CBL CBL C 0 1 Y N N -5.073 -51.868 31.267 -5.517 -0.311 1.109 CBL BMB 39 BMB CBM CBM C 0 1 N N R 0.904 -48.032 28.300 2.462 -0.591 -0.082 CBM BMB 40 BMB CBO CBO C 0 1 N N S -1.365 -49.925 26.856 0.182 -1.808 0.771 CBO BMB 41 BMB CBP CBP C 0 1 N N S -3.476 -49.368 27.914 -1.669 -1.746 -0.743 CBP BMB 42 BMB CBQ CBQ C 0 1 N N S -0.266 -47.193 27.705 1.563 0.417 -0.790 CBQ BMB 43 BMB CBR CBR C 0 1 N N N -5.101 -50.346 31.180 -5.166 -0.241 -0.356 CBR BMB 44 BMB NBS NBS N 0 1 N N N -2.100 -48.909 27.647 -0.372 -1.137 -0.408 NBS BMB 45 BMB HN HN H 0 1 N N N 1.441 -42.006 27.432 1.195 5.148 -1.559 HN BMB 46 BMB HA HA H 0 1 N N N -0.127 -43.320 28.431 1.735 4.013 1.087 HA BMB 47 BMB HB HB H 0 1 N N N -1.229 -41.643 27.191 -0.976 4.416 -0.254 HB BMB 48 BMB HBA HBA H 0 1 N N N -0.938 -42.496 25.623 -0.691 3.362 1.152 HBA BMB 49 BMB HAA HAA H 0 1 N N N -3.309 -42.708 26.341 -1.513 5.591 1.862 HAA BMB 50 BMB HAAA HAAA H 0 0 N N N -2.489 -44.306 26.327 0.147 5.308 2.441 HAAA BMB 51 BMB HAAB HAAB H 0 0 N N N -2.779 -43.459 27.884 -0.138 6.362 1.035 HAAB BMB 52 BMB HAB HAB H 0 1 N N N 2.467 -42.337 25.303 3.461 4.559 -1.030 HAB BMB 53 BMB HABA HABA H 0 0 N N N 1.332 -43.703 25.036 3.248 6.325 -1.096 HABA BMB 54 BMB HABB HABB H 0 0 N N N 0.704 -42.024 25.163 3.300 5.493 0.477 HABB BMB 55 BMB HAF HAF H 0 1 N N N 8.365 -42.738 26.632 12.208 -0.766 -0.615 HAF BMB 56 BMB HAG HAG H 0 1 N N N -9.377 -47.748 33.260 -9.448 -1.569 -3.279 HAG BMB 57 BMB HAH HAH H 0 1 N N N -4.805 -55.714 31.451 -6.409 -0.490 4.844 HAH BMB 58 BMB HAI HAI H 0 1 N N N 8.859 -43.444 28.970 11.160 0.009 1.474 HAI BMB 59 BMB HAJ HAJ H 0 1 N N N 6.187 -43.312 25.607 10.921 -2.141 -2.201 HAJ BMB 60 BMB HAK HAK H 0 1 N N N -7.515 -46.479 32.222 -8.859 0.801 -2.964 HAK BMB 61 BMB HAL HAL H 0 1 N N N -9.309 -50.226 33.293 -8.064 -3.328 -2.253 HAL BMB 62 BMB HAM HAM H 0 1 N N N -3.017 -54.307 32.432 -6.376 1.684 3.689 HAM BMB 63 BMB HAN HAN H 0 1 N N N -6.730 -54.662 30.313 -5.876 -2.550 3.605 HAN BMB 64 BMB HAO HAO H 0 1 N N N 7.076 -44.545 30.292 8.822 -0.582 1.973 HAO BMB 65 BMB HAP HAP H 0 1 N N N 4.449 -44.513 26.900 8.583 -2.734 -1.702 HAP BMB 66 BMB HAQ HAQ H 0 1 N N N -5.558 -47.694 31.318 -6.891 1.413 -1.617 HAQ BMB 67 BMB HAR HAR H 0 1 N N N -7.349 -51.435 32.400 -6.095 -2.717 -0.906 HAR BMB 68 BMB HAS HAS H 0 1 N N N -3.168 -51.841 32.263 -5.801 1.799 1.298 HAS BMB 69 BMB HAT HAT H 0 1 N N N -6.877 -52.195 30.130 -5.303 -2.435 1.213 HAT BMB 70 BMB HAV HAV H 0 1 N N N 3.709 -47.423 30.056 4.678 -1.409 1.285 HAV BMB 71 BMB HAVA HAVA H 0 0 N N N 3.384 -47.854 28.335 4.578 -2.306 -0.249 HAVA BMB 72 BMB HAW HAW H 0 1 N N N 1.526 -47.987 30.382 4.182 0.702 0.081 HAW BMB 73 BMB HAWA HAWA H 0 0 N N N 1.178 -46.370 29.675 4.082 -0.196 -1.452 HAWA BMB 74 BMB HAX HAX H 0 1 N N N -0.418 -49.393 29.327 2.546 0.405 1.836 HAX BMB 75 BMB HAXA HAXA H 0 0 N N N 1.278 -49.979 29.150 2.826 -1.339 1.900 HAXA BMB 76 BMB HAY HAY H 0 1 N N N 0.768 -50.001 26.600 0.674 -1.195 2.773 HAY BMB 77 BMB HAYA HAYA H 0 0 N N N 0.074 -51.314 27.644 0.195 0.137 1.701 HAYA BMB 78 BMB HAZ HAZ H 0 1 N N N -2.009 -51.746 27.876 -1.610 -1.851 2.026 HAZ BMB 79 BMB HAZA HAZA H 0 0 N N N -2.090 -51.846 26.112 -0.684 -3.388 2.007 HAZA BMB 80 BMB HBAA HBAA H 0 0 N N N -4.000 -50.301 25.996 -1.304 -3.848 -0.303 HBAA BMB 81 BMB HBAB HBAB H 0 0 N N N -4.381 -51.302 27.401 -2.827 -3.200 0.393 HBAB BMB 82 BMB HBB HBB H 0 1 N N N 4.292 -44.731 30.340 6.994 -2.122 1.552 HBB BMB 83 BMB HBBA HBBA H 0 0 N N N 5.077 -46.310 29.936 6.894 -3.020 0.018 HBBA BMB 84 BMB HNBD HNBD H 0 0 N N N 3.599 -45.748 27.777 6.387 -0.903 -1.062 HNBD BMB 85 BMB HNBE HNBE H 0 0 N N N -0.113 -45.403 28.874 1.492 1.600 0.969 HNBE BMB 86 BMB HNBF HNBF H 0 0 N N N -5.616 -49.769 29.177 -4.267 -2.064 -0.968 HNBF BMB 87 BMB HBM HBM H 0 1 N N N 1.656 -48.095 27.500 2.255 -1.596 -0.463 HBM BMB 88 BMB HBO HBO H 0 1 N N N -1.201 -49.561 25.831 0.946 -2.532 0.480 HBO BMB 89 BMB HBP HBP H 0 1 N N N -4.226 -48.584 27.736 -1.685 -2.040 -1.792 HBP BMB 90 BMB HBQ HBQ H 0 1 N N N -0.136 -47.349 26.624 2.039 0.684 -1.746 HBQ BMB 91 BMB HBR HBR H 0 1 N N N -4.295 -49.992 31.839 -4.855 0.774 -0.606 HBR BMB 92 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BMB C O DOUB N N 1 BMB C CA SING N N 2 BMB C NBE SING N N 3 BMB N CA SING N N 4 BMB N CAB SING N N 5 BMB CA CB SING N N 6 BMB CB CAA SING N N 7 BMB OAD CBH DOUB N N 8 BMB OAE CBI DOUB N N 9 BMB CAF CAI DOUB Y N 10 BMB CAF CAJ SING Y N 11 BMB CAG CAK DOUB Y N 12 BMB CAG CAL SING Y N 13 BMB CAH CAM DOUB Y N 14 BMB CAH CAN SING Y N 15 BMB CAI CAO SING Y N 16 BMB CAJ CAP DOUB Y N 17 BMB CAK CAQ SING Y N 18 BMB CAL CAR DOUB Y N 19 BMB CAM CAS SING Y N 20 BMB CAN CAT DOUB Y N 21 BMB CAO CBJ DOUB Y N 22 BMB CAP CBJ SING Y N 23 BMB CAQ CBK DOUB Y N 24 BMB CAR CBK SING Y N 25 BMB CAS CBL DOUB Y N 26 BMB CAT CBL SING Y N 27 BMB CAV CAW SING N N 28 BMB CAV NBD SING N N 29 BMB CAW CBM SING N N 30 BMB CAX CAY SING N N 31 BMB CAX CBM SING N N 32 BMB CAY CBO SING N N 33 BMB CAZ CBA SING N N 34 BMB CAZ CBO SING N N 35 BMB CBA CBP SING N N 36 BMB CBB NBD SING N N 37 BMB CBB CBJ SING N N 38 BMB NBE CBQ SING N N 39 BMB NBF CBH SING N N 40 BMB NBF CBR SING N N 41 BMB CBH CBP SING N N 42 BMB CBI CBQ SING N N 43 BMB CBI NBS SING N N 44 BMB CBK CBR SING N N 45 BMB CBL CBR SING N N 46 BMB CBM CBQ SING N N 47 BMB CBO NBS SING N N 48 BMB CBP NBS SING N N 49 BMB N HN SING N N 50 BMB CA HA SING N N 51 BMB CB HB SING N N 52 BMB CB HBA SING N N 53 BMB CAA HAA SING N N 54 BMB CAA HAAA SING N N 55 BMB CAA HAAB SING N N 56 BMB CAB HAB SING N N 57 BMB CAB HABA SING N N 58 BMB CAB HABB SING N N 59 BMB CAF HAF SING N N 60 BMB CAG HAG SING N N 61 BMB CAH HAH SING N N 62 BMB CAI HAI SING N N 63 BMB CAJ HAJ SING N N 64 BMB CAK HAK SING N N 65 BMB CAL HAL SING N N 66 BMB CAM HAM SING N N 67 BMB CAN HAN SING N N 68 BMB CAO HAO SING N N 69 BMB CAP HAP SING N N 70 BMB CAQ HAQ SING N N 71 BMB CAR HAR SING N N 72 BMB CAS HAS SING N N 73 BMB CAT HAT SING N N 74 BMB CAV HAV SING N N 75 BMB CAV HAVA SING N N 76 BMB CAW HAW SING N N 77 BMB CAW HAWA SING N N 78 BMB CAX HAX SING N N 79 BMB CAX HAXA SING N N 80 BMB CAY HAY SING N N 81 BMB CAY HAYA SING N N 82 BMB CAZ HAZ SING N N 83 BMB CAZ HAZA SING N N 84 BMB CBA HBAA SING N N 85 BMB CBA HBAB SING N N 86 BMB CBB HBB SING N N 87 BMB CBB HBBA SING N N 88 BMB NBD HNBD SING N N 89 BMB NBE HNBE SING N N 90 BMB NBF HNBF SING N N 91 BMB CBM HBM SING N N 92 BMB CBO HBO SING N N 93 BMB CBP HBP SING N N 94 BMB CBQ HBQ SING N N 95 BMB CBR HBR SING N N 96 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor BMB SMILES ACDLabs 12.01 "O=C(NC(c1ccccc1)c2ccccc2)C4N3C(=O)C(NC(=O)C(NC)CC)C(CCC3CC4)CCNCc5ccccc5" BMB SMILES_CANONICAL CACTVS 3.370 "CC[C@H](NC)C(=O)N[C@H]1[C@@H](CCNCc2ccccc2)CC[C@H]3CC[C@H](N3C1=O)C(=O)NC(c4ccccc4)c5ccccc5" BMB SMILES CACTVS 3.370 "CC[CH](NC)C(=O)N[CH]1[CH](CCNCc2ccccc2)CC[CH]3CC[CH](N3C1=O)C(=O)NC(c4ccccc4)c5ccccc5" BMB SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CC[C@@H](C(=O)N[C@H]1[C@H](CC[C@H]2CC[C@H](N2C1=O)C(=O)NC(c3ccccc3)c4ccccc4)CCNCc5ccccc5)NC" BMB SMILES "OpenEye OEToolkits" 1.7.0 "CCC(C(=O)NC1C(CCC2CCC(N2C1=O)C(=O)NC(c3ccccc3)c4ccccc4)CCNCc5ccccc5)NC" BMB InChI InChI 1.03 "InChI=1S/C37H47N5O3/c1-3-31(38-2)35(43)41-34-29(23-24-39-25-26-13-7-4-8-14-26)19-20-30-21-22-32(42(30)37(34)45)36(44)40-33(27-15-9-5-10-16-27)28-17-11-6-12-18-28/h4-18,29-34,38-39H,3,19-25H2,1-2H3,(H,40,44)(H,41,43)/t29-,30+,31+,32+,34+/m1/s1" BMB InChIKey InChI 1.03 NVNDSZWHCFDEAR-UCDLYESDSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMB "SYSTEMATIC NAME" ACDLabs 12.01 "(3S,6S,7R,9aS)-7-[2-(benzylamino)ethyl]-N-(diphenylmethyl)-6-{[(2S)-2-(methylamino)butanoyl]amino}-5-oxooctahydro-1H-pyrrolo[1,2-a]azepine-3-carboxamide" BMB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(3S,6S,7R,9aS)-N-benzhydryl-6-[[(2S)-2-(methylamino)butanoyl]amino]-5-oxo-7-[2-(phenylmethylamino)ethyl]-1,2,3,6,7,8,9,9a-octahydropyrrolo[1,2-a]azepine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site BMB "Create component" 2010-10-06 PDBJ BMB "Modify aromatic_flag" 2011-06-04 RCSB BMB "Modify descriptor" 2011-06-04 RCSB #