data_BMO # _chem_comp.id BMO _chem_comp.name "N-ACRIDIN-9-YL-N'-[3-(ACRIDIN-9-YLAMINO)PROPYL]PROPANE-1,3-DIAMINE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H31 N5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "1,3-PROPANEDIAMINE; N-9-ACRIDINYL-N -[3-(9-ACRIDINYLAMINO)PROPYL]" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2006-04-25 _chem_comp.pdbx_modified_date 2020-05-26 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 485.622 _chem_comp.one_letter_code ? _chem_comp.three_letter_code BMO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal BMO N17 N17 N 0 1 N N N 19.748 12.875 -6.438 -5.833 0.562 -4.517 N17 BMO 1 BMO C19 C19 C 0 1 N N N 18.381 13.193 -5.658 -4.432 0.775 -4.754 C19 BMO 2 BMO C36 C36 C 0 1 N N N 17.157 12.814 -6.440 -4.083 0.780 -6.241 C36 BMO 3 BMO C22 C22 C 0 1 N N N 17.115 11.309 -6.462 -2.604 1.029 -6.526 C22 BMO 4 BMO N20 N20 N 0 1 N N N 15.708 10.956 -6.556 -1.758 0.059 -5.915 N20 BMO 5 BMO C21 C21 C 0 1 Y N N 15.175 10.469 -7.662 -0.461 0.374 -5.428 C21 BMO 6 BMO C27 C27 C 0 1 Y N N 14.996 9.129 -7.753 0.195 1.519 -5.892 C27 BMO 7 BMO C26 C26 C 0 1 Y N N 15.428 8.389 -6.668 -0.395 2.378 -6.836 C26 BMO 8 BMO C25 C25 C 0 1 Y N N 15.283 7.026 -6.739 0.284 3.510 -7.278 C25 BMO 9 BMO C24 C24 C 0 1 Y N N 14.666 6.464 -7.856 1.550 3.786 -6.780 C24 BMO 10 BMO C23 C23 C 0 1 Y N N 14.199 7.206 -8.944 2.133 2.930 -5.842 C23 BMO 11 BMO C28 C28 C 0 1 Y N N 14.397 8.570 -8.893 1.476 1.792 -5.384 C28 BMO 12 BMO N29 N29 N 0 1 Y N N 13.988 9.329 -9.914 2.068 0.989 -4.478 N29 BMO 13 BMO C31 C31 C 0 1 Y N N 14.195 10.664 -9.826 1.432 -0.112 -4.034 C31 BMO 14 BMO C30 C30 C 0 1 Y N N 14.753 11.257 -8.698 0.149 -0.463 -4.488 C30 BMO 15 BMO C34 C34 C 0 1 Y N N 14.943 12.640 -8.613 -0.486 -1.620 -4.005 C34 BMO 16 BMO C35 C35 C 0 1 Y N N 14.534 13.464 -9.688 0.148 -2.432 -3.069 C35 BMO 17 BMO C32 C32 C 0 1 Y N N 13.939 12.864 -10.795 1.416 -2.092 -2.615 C32 BMO 18 BMO C33 C33 C 0 1 Y N N 13.763 11.470 -10.847 2.045 -0.942 -3.098 C33 BMO 19 BMO C1 C1 C 0 1 N N N ? ? ? -6.143 0.550 -3.086 C1 BMO 20 BMO C2 C2 C 0 1 N N N ? ? ? -7.622 0.287 -2.809 C2 BMO 21 BMO C3 C3 C 0 1 N N N ? ? ? -8.127 -1.041 -3.367 C3 BMO 22 BMO N1 N1 N 0 1 N N N ? ? ? -7.407 -2.170 -2.844 N1 BMO 23 BMO C4 C4 C 0 1 Y N N ? ? ? -7.149 -3.328 -3.567 C4 BMO 24 BMO C5 C5 C 0 1 Y N N ? ? ? -7.918 -3.657 -4.708 C5 BMO 25 BMO C6 C6 C 0 1 Y N N ? ? ? -8.961 -2.817 -5.136 C6 BMO 26 BMO C7 C7 C 0 1 Y N N ? ? ? -9.713 -3.146 -6.259 C7 BMO 27 BMO C8 C8 C 0 1 Y N N ? ? ? -9.427 -4.313 -6.957 C8 BMO 28 BMO C9 C9 C 0 1 Y N N ? ? ? -8.390 -5.145 -6.528 C9 BMO 29 BMO C10 C10 C 0 1 Y N N ? ? ? -7.622 -4.839 -5.408 C10 BMO 30 BMO N2 N2 N 0 1 Y N N ? ? ? -6.629 -5.664 -5.024 N2 BMO 31 BMO C11 C11 C 0 1 Y N N ? ? ? -5.886 -5.368 -3.940 C11 BMO 32 BMO C12 C12 C 0 1 Y N N ? ? ? -4.859 -6.221 -3.544 C12 BMO 33 BMO C13 C13 C 0 1 Y N N ? ? ? -4.068 -5.947 -2.426 C13 BMO 34 BMO C14 C14 C 0 1 Y N N ? ? ? -4.297 -4.798 -1.679 C14 BMO 35 BMO C15 C15 C 0 1 Y N N ? ? ? -5.317 -3.929 -2.054 C15 BMO 36 BMO C16 C16 C 0 1 Y N N ? ? ? -6.111 -4.208 -3.180 C16 BMO 37 BMO H171 1H17 H 0 0 N N N 20.256 13.155 -7.252 -6.385 1.304 -4.960 H171 BMO 38 BMO H191 1H19 H 0 0 N N N 18.380 12.624 -4.717 -4.178 1.742 -4.308 H191 BMO 39 BMO H192 2H19 H 0 0 N N N 18.342 14.279 -5.488 -3.880 -0.001 -4.215 H192 BMO 40 BMO H361 1H36 H 0 0 N N N 16.253 13.218 -5.960 -4.367 -0.183 -6.683 H361 BMO 41 BMO H362 2H36 H 0 0 N N N 17.194 13.225 -7.460 -4.683 1.553 -6.737 H362 BMO 42 BMO H221 1H22 H 0 0 N N N 17.674 10.916 -7.324 -2.396 1.025 -7.600 H221 BMO 43 BMO H222 2H22 H 0 0 N N N 17.581 10.878 -5.563 -2.306 2.005 -6.128 H222 BMO 44 BMO HN20 HN20 H 0 0 N N N 15.563 10.253 -5.860 -2.054 -0.888 -5.808 HN20 BMO 45 BMO H26 H26 H 0 1 N N N 15.862 8.864 -5.800 -1.385 2.188 -7.243 H26 BMO 46 BMO H25 H25 H 0 1 N N N 15.643 6.396 -5.939 -0.174 4.173 -8.006 H25 BMO 47 BMO H24 H24 H 0 1 N N N 14.542 5.391 -7.882 2.088 4.668 -7.117 H24 BMO 48 BMO H23 H23 H 0 1 N N N 13.708 6.735 -9.783 3.127 3.168 -5.467 H23 BMO 49 BMO H34 H34 H 0 1 N N N 15.398 13.075 -7.735 -1.478 -1.912 -4.342 H34 BMO 50 BMO H35 H35 H 0 1 N N N 14.680 14.533 -9.651 -0.344 -3.325 -2.697 H35 BMO 51 BMO H32 H32 H 0 1 N N N 13.609 13.476 -11.622 1.920 -2.720 -1.886 H32 BMO 52 BMO H33 H33 H 0 1 N N N 13.280 11.027 -11.705 3.038 -0.697 -2.728 H33 BMO 53 BMO H11 1H1 H 0 1 N N N ? ? ? -5.534 -0.240 -2.636 H11 BMO 54 BMO H12A 2H1 H 0 0 N N N ? ? ? -5.820 1.507 -2.666 H12A BMO 55 BMO H21 1H2 H 0 1 N N N ? ? ? -7.795 0.300 -1.726 H21 BMO 56 BMO H22 2H2 H 0 1 N N N ? ? ? -8.209 1.108 -3.238 H22 BMO 57 BMO H31 1H3 H 0 1 N N N ? ? ? -9.189 -1.191 -3.148 H31 BMO 58 BMO H32A 2H3 H 0 0 N N N ? ? ? -8.001 -1.060 -4.454 H32A BMO 59 BMO HN1 HN1 H 0 1 N N N ? ? ? -7.062 -2.123 -1.889 HN1 BMO 60 BMO H6 H6 H 0 1 N N N ? ? ? -9.208 -1.898 -4.611 H6 BMO 61 BMO H7 H7 H 0 1 N N N ? ? ? -10.518 -2.496 -6.588 H7 BMO 62 BMO H8 H8 H 0 1 N N N ? ? ? -10.007 -4.579 -7.835 H8 BMO 63 BMO H9 H9 H 0 1 N N N ? ? ? -8.186 -6.054 -7.092 H9 BMO 64 BMO H12 H12 H 0 1 N N N ? ? ? -4.660 -7.128 -4.113 H12 BMO 65 BMO H13 H13 H 0 1 N N N ? ? ? -3.275 -6.632 -2.142 H13 BMO 66 BMO H14 H14 H 0 1 N N N ? ? ? -3.685 -4.581 -0.809 H14 BMO 67 BMO H15 H15 H 0 1 N N N ? ? ? -5.473 -3.039 -1.450 H15 BMO 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BMO N17 C19 SING N N 1 BMO N17 C1 SING N N 2 BMO N17 H171 SING N N 3 BMO C19 C36 SING N N 4 BMO C19 H191 SING N N 5 BMO C19 H192 SING N N 6 BMO C36 C22 SING N N 7 BMO C36 H361 SING N N 8 BMO C36 H362 SING N N 9 BMO C22 N20 SING N N 10 BMO C22 H221 SING N N 11 BMO C22 H222 SING N N 12 BMO N20 C21 SING N N 13 BMO N20 HN20 SING N N 14 BMO C21 C27 DOUB Y N 15 BMO C21 C30 SING Y N 16 BMO C27 C26 SING Y N 17 BMO C27 C28 SING Y N 18 BMO C26 C25 DOUB Y N 19 BMO C26 H26 SING N N 20 BMO C25 C24 SING Y N 21 BMO C25 H25 SING N N 22 BMO C24 C23 DOUB Y N 23 BMO C24 H24 SING N N 24 BMO C23 C28 SING Y N 25 BMO C23 H23 SING N N 26 BMO C28 N29 DOUB Y N 27 BMO N29 C31 SING Y N 28 BMO C31 C30 SING Y N 29 BMO C31 C33 DOUB Y N 30 BMO C30 C34 DOUB Y N 31 BMO C34 C35 SING Y N 32 BMO C34 H34 SING N N 33 BMO C35 C32 DOUB Y N 34 BMO C35 H35 SING N N 35 BMO C32 C33 SING Y N 36 BMO C32 H32 SING N N 37 BMO C33 H33 SING N N 38 BMO C1 C2 SING N N 39 BMO C1 H11 SING N N 40 BMO C1 H12A SING N N 41 BMO C2 C3 SING N N 42 BMO C2 H21 SING N N 43 BMO C2 H22 SING N N 44 BMO C3 N1 SING N N 45 BMO C3 H31 SING N N 46 BMO C3 H32A SING N N 47 BMO N1 C4 SING N N 48 BMO N1 HN1 SING N N 49 BMO C4 C5 DOUB Y N 50 BMO C4 C16 SING Y N 51 BMO C5 C6 SING Y N 52 BMO C5 C10 SING Y N 53 BMO C6 C7 DOUB Y N 54 BMO C6 H6 SING N N 55 BMO C7 C8 SING Y N 56 BMO C7 H7 SING N N 57 BMO C8 C9 DOUB Y N 58 BMO C8 H8 SING N N 59 BMO C9 C10 SING Y N 60 BMO C9 H9 SING N N 61 BMO C10 N2 DOUB Y N 62 BMO N2 C11 SING Y N 63 BMO C11 C12 DOUB Y N 64 BMO C11 C16 SING Y N 65 BMO C12 C13 SING Y N 66 BMO C12 H12 SING N N 67 BMO C13 C14 DOUB Y N 68 BMO C13 H13 SING N N 69 BMO C14 C15 SING Y N 70 BMO C14 H14 SING N N 71 BMO C15 C16 DOUB Y N 72 BMO C15 H15 SING N N 73 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor BMO SMILES ACDLabs 10.04 "n2c1c(cccc1)c(c3c2cccc3)NCCCNCCCNc4c6c(nc5c4cccc5)cccc6" BMO SMILES_CANONICAL CACTVS 3.341 "C(CNCCCNc1c2ccccc2nc3ccccc13)CNc4c5ccccc5nc6ccccc46" BMO SMILES CACTVS 3.341 "C(CNCCCNc1c2ccccc2nc3ccccc13)CNc4c5ccccc5nc6ccccc46" BMO SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1ccc2c(c1)c(c3ccccc3n2)NCCCNCCCNc4c5ccccc5nc6c4cccc6" BMO SMILES "OpenEye OEToolkits" 1.5.0 "c1ccc2c(c1)c(c3ccccc3n2)NCCCNCCCNc4c5ccccc5nc6c4cccc6" BMO InChI InChI 1.03 "InChI=1S/C32H31N5/c1-5-15-27-23(11-1)31(24-12-2-6-16-28(24)36-27)34-21-9-19-33-20-10-22-35-32-25-13-3-7-17-29(25)37-30-18-8-4-14-26(30)32/h1-8,11-18,33H,9-10,19-22H2,(H,34,36)(H,35,37)" BMO InChIKey InChI 1.03 WGBHBVVVCBOHMA-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMO "SYSTEMATIC NAME" ACDLabs 10.04 "N-acridin-9-yl-N'-[3-(acridin-9-ylamino)propyl]propane-1,3-diamine" BMO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "N'-acridin-9-yl-N-[3-(acridin-9-ylamino)propyl]propane-1,3-diamine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site BMO "Create component" 2006-04-25 RCSB BMO "Modify descriptor" 2011-06-04 RCSB BMO "Modify synonyms" 2020-05-26 PDBE # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 BMO 1,3-PROPANEDIAMINE ? ? 2 BMO "N-9-ACRIDINYL-N -[3-(9-ACRIDINYLAMINO)PROPYL]" ? ? #