data_BOD # _chem_comp.id BOD _chem_comp.name "5-{4-[3-(2-methoxypyrimidin-5-yl)phenyl]piperazin-1-yl}pyrimidine-2,4-diamine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H22 N8 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-08-17 _chem_comp.pdbx_modified_date 2018-08-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 378.431 _chem_comp.one_letter_code ? _chem_comp.three_letter_code BOD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6AOH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal BOD C18 C1 C 0 1 Y N N 29.561 97.186 -72.504 5.451 -0.144 -1.037 C18 BOD 1 BOD C17 C2 C 0 1 Y N N 29.400 95.466 -70.910 6.900 -1.357 0.284 C17 BOD 2 BOD C16 C3 C 0 1 Y N N 31.475 96.478 -71.250 4.781 -0.970 1.108 C16 BOD 3 BOD C12 C4 C 0 1 N N N 32.691 98.972 -72.010 2.157 -0.740 -0.267 C12 BOD 4 BOD C11 C5 C 0 1 N N N 33.360 100.094 -72.794 0.799 -0.087 -0.535 C11 BOD 5 BOD C9 C6 C 0 1 Y N N 35.123 99.038 -74.202 -0.754 1.459 0.349 C9 BOD 6 BOD N5 N1 N 0 1 Y N N 28.831 96.261 -71.845 6.642 -0.696 -0.835 N5 BOD 7 BOD C13 C7 C 0 1 N N N 31.584 98.437 -74.315 2.909 1.279 0.837 C13 BOD 8 BOD C8 C8 C 0 1 Y N N 35.446 98.384 -75.389 -0.892 2.839 0.253 C8 BOD 9 BOD C6 C9 C 0 1 Y N N 37.741 98.261 -74.710 -3.262 2.597 0.007 C6 BOD 10 BOD N7 N2 N 0 1 N N N 28.647 94.546 -70.263 8.155 -1.921 0.461 N7 BOD 11 BOD C4 C10 C 0 1 Y N N 38.294 99.773 -71.397 -4.226 -1.043 0.124 C4 BOD 12 BOD N1 N3 N 0 1 Y N N 39.346 99.959 -70.586 -5.321 -1.780 0.048 N1 BOD 13 BOD C2 C11 C 0 1 Y N N 39.772 98.698 -72.959 -5.607 0.899 -0.151 C2 BOD 14 BOD C3 C12 C 0 1 Y N N 38.484 99.131 -72.621 -4.336 0.346 0.026 C3 BOD 15 BOD N4 N4 N 0 1 Y N N 30.714 95.577 -70.617 5.993 -1.494 1.238 N4 BOD 16 BOD N6 N5 N 0 1 N N N 28.933 97.954 -73.430 5.183 0.543 -2.213 N6 BOD 17 BOD C15 C13 C 0 1 Y N N 30.918 97.315 -72.217 4.468 -0.271 -0.047 C15 BOD 18 BOD N3 N6 N 0 1 N N N 31.739 98.254 -72.863 3.196 0.298 -0.220 N3 BOD 19 BOD C14 C14 C 0 1 N N N 32.767 99.124 -75.001 1.550 1.932 0.568 C14 BOD 20 BOD N2 N7 N 0 1 N N N 33.784 99.413 -73.999 0.512 0.893 0.521 N2 BOD 21 BOD C7 C15 C 0 1 Y N N 36.753 97.998 -75.653 -2.142 3.401 0.083 C7 BOD 22 BOD C10 C16 C 0 1 Y N N 36.121 99.302 -73.253 -1.874 0.644 0.279 C10 BOD 23 BOD C5 C17 C 0 1 Y N N 37.438 98.905 -73.510 -3.134 1.212 0.107 C5 BOD 24 BOD N N8 N 0 1 Y N N 40.798 98.903 -72.125 -6.651 0.093 -0.228 N BOD 25 BOD C1 C18 C 0 1 Y N N 40.588 99.531 -70.943 -6.507 -1.218 -0.125 C1 BOD 26 BOD O O1 O 0 1 N N N 41.660 99.724 -70.109 -7.603 -2.009 -0.210 O BOD 27 BOD C C19 C 0 1 N N N 41.632 100.703 -69.056 -7.396 -3.419 -0.093 C BOD 28 BOD H1 H1 H 0 1 N N N 32.525 96.557 -71.011 4.048 -1.088 1.892 H1 BOD 29 BOD H2 H2 H 0 1 N N N 32.156 99.399 -71.149 2.125 -1.266 0.688 H2 BOD 30 BOD H3 H3 H 0 1 N N N 33.459 98.270 -71.653 2.385 -1.447 -1.064 H3 BOD 31 BOD H4 H4 H 0 1 N N N 34.220 100.507 -72.245 0.822 0.416 -1.502 H4 BOD 32 BOD H5 H5 H 0 1 N N N 32.648 100.901 -73.021 0.023 -0.853 -0.542 H5 BOD 33 BOD H6 H6 H 0 1 N N N 30.685 99.046 -74.490 2.886 0.776 1.803 H6 BOD 34 BOD H7 H7 H 0 1 N N N 31.450 97.446 -74.773 3.686 2.043 0.844 H7 BOD 35 BOD H8 H8 H 0 1 N N N 34.671 98.175 -76.112 -0.019 3.473 0.312 H8 BOD 36 BOD H9 H9 H 0 1 N N N 38.759 97.962 -74.910 -4.238 3.040 -0.126 H9 BOD 37 BOD H10 H10 H 0 1 N N N 27.705 94.591 -70.596 8.358 -2.407 1.276 H10 BOD 38 BOD H11 H11 H 0 1 N N N 29.017 93.633 -70.433 8.830 -1.828 -0.229 H11 BOD 39 BOD H12 H12 H 0 1 N N N 37.312 100.116 -71.106 -3.261 -1.508 0.266 H12 BOD 40 BOD H13 H13 H 0 1 N N N 39.939 98.195 -73.900 -5.733 1.969 -0.231 H13 BOD 41 BOD H14 H14 H 0 1 N N N 27.968 97.695 -73.479 4.310 0.940 -2.354 H14 BOD 42 BOD H15 H15 H 0 1 N N N 29.007 98.917 -73.170 5.870 0.626 -2.893 H15 BOD 43 BOD H16 H16 H 0 1 N N N 33.185 98.460 -75.772 1.322 2.638 1.366 H16 BOD 44 BOD H17 H17 H 0 1 N N N 32.431 100.061 -75.468 1.582 2.458 -0.386 H17 BOD 45 BOD H18 H18 H 0 1 N N N 37.000 97.500 -76.579 -2.244 4.474 0.010 H18 BOD 46 BOD H19 H19 H 0 1 N N N 35.875 99.808 -72.331 -1.770 -0.428 0.356 H19 BOD 47 BOD H20 H20 H 0 1 N N N 42.590 100.688 -68.515 -8.353 -3.934 -0.179 H20 BOD 48 BOD H21 H21 H 0 1 N N N 41.470 101.702 -69.488 -6.730 -3.755 -0.887 H21 BOD 49 BOD H22 H22 H 0 1 N N N 40.814 100.468 -68.359 -6.949 -3.641 0.876 H22 BOD 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BOD C7 C8 DOUB Y N 1 BOD C7 C6 SING Y N 2 BOD C8 C9 SING Y N 3 BOD C14 C13 SING N N 4 BOD C14 N2 SING N N 5 BOD C6 C5 DOUB Y N 6 BOD C13 N3 SING N N 7 BOD C9 N2 SING N N 8 BOD C9 C10 DOUB Y N 9 BOD N2 C11 SING N N 10 BOD C5 C10 SING Y N 11 BOD C5 C3 SING N N 12 BOD N6 C18 SING N N 13 BOD C2 C3 DOUB Y N 14 BOD C2 N SING Y N 15 BOD N3 C15 SING N N 16 BOD N3 C12 SING N N 17 BOD C11 C12 SING N N 18 BOD C3 C4 SING Y N 19 BOD C18 C15 DOUB Y N 20 BOD C18 N5 SING Y N 21 BOD C15 C16 SING Y N 22 BOD N C1 DOUB Y N 23 BOD N5 C17 DOUB Y N 24 BOD C4 N1 DOUB Y N 25 BOD C16 N4 DOUB Y N 26 BOD C1 N1 SING Y N 27 BOD C1 O SING N N 28 BOD C17 N4 SING Y N 29 BOD C17 N7 SING N N 30 BOD O C SING N N 31 BOD C16 H1 SING N N 32 BOD C12 H2 SING N N 33 BOD C12 H3 SING N N 34 BOD C11 H4 SING N N 35 BOD C11 H5 SING N N 36 BOD C13 H6 SING N N 37 BOD C13 H7 SING N N 38 BOD C8 H8 SING N N 39 BOD C6 H9 SING N N 40 BOD N7 H10 SING N N 41 BOD N7 H11 SING N N 42 BOD C4 H12 SING N N 43 BOD C2 H13 SING N N 44 BOD N6 H14 SING N N 45 BOD N6 H15 SING N N 46 BOD C14 H16 SING N N 47 BOD C14 H17 SING N N 48 BOD C7 H18 SING N N 49 BOD C10 H19 SING N N 50 BOD C H20 SING N N 51 BOD C H21 SING N N 52 BOD C H22 SING N N 53 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor BOD SMILES ACDLabs 12.01 "c1(c(cnc(N)n1)N4CCN(c2cc(ccc2)c3cnc(nc3)OC)CC4)N" BOD InChI InChI 1.03 "InChI=1S/C19H22N8O/c1-28-19-23-10-14(11-24-19)13-3-2-4-15(9-13)26-5-7-27(8-6-26)16-12-22-18(21)25-17(16)20/h2-4,9-12H,5-8H2,1H3,(H4,20,21,22,25)" BOD InChIKey InChI 1.03 GUZBZPCNAJDYMO-UHFFFAOYSA-N BOD SMILES_CANONICAL CACTVS 3.385 "COc1ncc(cn1)c2cccc(c2)N3CCN(CC3)c4cnc(N)nc4N" BOD SMILES CACTVS 3.385 "COc1ncc(cn1)c2cccc(c2)N3CCN(CC3)c4cnc(N)nc4N" BOD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "COc1ncc(cn1)c2cccc(c2)N3CCN(CC3)c4cnc(nc4N)N" BOD SMILES "OpenEye OEToolkits" 2.0.6 "COc1ncc(cn1)c2cccc(c2)N3CCN(CC3)c4cnc(nc4N)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BOD "SYSTEMATIC NAME" ACDLabs 12.01 "5-{4-[3-(2-methoxypyrimidin-5-yl)phenyl]piperazin-1-yl}pyrimidine-2,4-diamine" BOD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "5-[4-[3-(2-methoxypyrimidin-5-yl)phenyl]piperazin-1-yl]pyrimidine-2,4-diamine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site BOD "Create component" 2017-08-17 RCSB BOD "Initial release" 2018-08-22 RCSB #