data_BSO # _chem_comp.id BSO _chem_comp.name BIOTIN-D-SULFOXIDE _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H16 N2 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "5-[(3AR,4R,6AS)-5-OXIDO-2-OXOHEXAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-4-YL]PENTANOIC ACID" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2005-09-19 _chem_comp.pdbx_modified_date 2021-03-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 260.310 _chem_comp.one_letter_code ? _chem_comp.three_letter_code BSO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2C1S _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal BSO C11 C11 C 0 1 N N N 31.044 11.396 15.098 5.157 0.363 -0.177 C11 BSO 1 BSO O11 O11 O 0 1 N N N 31.030 12.440 14.406 6.365 -0.189 -0.370 O11 BSO 2 BSO O12 O12 O 0 1 N N N 30.332 10.401 14.871 5.030 1.564 -0.208 O12 BSO 3 BSO C10 C10 C 0 1 N N N 31.967 11.309 16.333 3.959 -0.515 0.078 C10 BSO 4 BSO C9 C9 C 0 1 N N N 33.287 12.112 16.259 2.716 0.358 0.263 C9 BSO 5 BSO C8 C8 C 0 1 N N N 34.251 11.395 15.321 1.500 -0.533 0.522 C8 BSO 6 BSO C7 C7 C 0 1 N N N 35.482 12.286 15.059 0.258 0.340 0.707 C7 BSO 7 BSO C2 C2 C 0 1 N N S 36.434 11.560 14.081 -0.959 -0.551 0.965 C2 BSO 8 BSO S1 S1 S 0 1 N N S 37.244 10.103 14.761 -1.424 -1.494 -0.551 S1 BSO 9 BSO C6 C6 C 0 1 N N N 38.434 10.006 13.393 -3.225 -1.595 -0.226 C6 BSO 10 BSO C5 C5 C 0 1 N N R 38.785 11.472 13.068 -3.483 -0.280 0.541 C5 BSO 11 BSO N1 N1 N 0 1 N N N 39.937 11.877 13.887 -3.905 0.751 -0.408 N1 BSO 12 BSO C3 C3 C 0 1 N N N 39.584 12.846 14.740 -3.047 1.778 -0.343 C3 BSO 13 BSO O3 O3 O 0 1 N N N 40.406 13.361 15.504 -3.154 2.776 -1.028 O3 BSO 14 BSO N2 N2 N 0 1 N N N 38.302 13.221 14.637 -2.060 1.604 0.547 N2 BSO 15 BSO C4 C4 C 0 1 N N S 37.639 12.419 13.564 -2.227 0.297 1.200 C4 BSO 16 BSO O10 O10 O 0 1 N N N 36.247 8.991 14.578 -0.859 -2.796 -0.499 O10 BSO 17 BSO H11 H11 H 0 1 N N N 30.402 12.344 13.700 7.133 0.374 -0.534 H11 BSO 18 BSO H101 1H10 H 0 0 N N N 32.265 10.253 16.408 3.811 -1.183 -0.771 H101 BSO 19 BSO H102 2H10 H 0 0 N N N 31.399 11.693 17.193 4.126 -1.105 0.979 H102 BSO 20 BSO H9C1 1H9C H 0 0 N N N 33.732 12.189 17.262 2.865 1.026 1.111 H9C1 BSO 21 BSO H9C2 2H9C H 0 0 N N N 33.084 13.123 15.878 2.549 0.948 -0.639 H9C2 BSO 22 BSO H8C1 1H8C H 0 0 N N N 33.743 11.186 14.368 1.352 -1.201 -0.327 H8C1 BSO 23 BSO H8C2 2H8C H 0 0 N N N 34.575 10.451 15.783 1.667 -1.123 1.423 H8C2 BSO 24 BSO H7C1 1H7C H 0 0 N N N 36.005 12.483 16.007 0.406 1.008 1.555 H7C1 BSO 25 BSO H7C2 2H7C H 0 0 N N N 35.159 13.241 14.619 0.091 0.930 -0.195 H7C2 BSO 26 BSO H2 H2 H 0 1 N N N 35.723 11.314 13.278 -0.777 -1.224 1.804 H2 BSO 27 BSO H6C1 1H6C H 0 0 N N N 38.018 9.479 12.522 -3.450 -2.462 0.397 H6C1 BSO 28 BSO H6C2 2H6C H 0 0 N N N 39.331 9.442 13.689 -3.795 -1.625 -1.155 H6C2 BSO 29 BSO H5 H5 H 0 1 N N N 38.960 11.543 11.984 -4.256 -0.432 1.295 H5 BSO 30 BSO H1 H1 H 0 1 N N N 40.854 11.484 13.817 -4.678 0.699 -0.991 H1 BSO 31 BSO HA HA H 0 1 N N N 37.859 13.926 15.191 -1.349 2.239 0.731 HA BSO 32 BSO H4 H4 H 0 1 N N N 37.209 13.071 12.790 -2.394 0.431 2.269 H4 BSO 33 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BSO C11 O11 SING N N 1 BSO C11 O12 DOUB N N 2 BSO C11 C10 SING N N 3 BSO O11 H11 SING N N 4 BSO C10 C9 SING N N 5 BSO C10 H101 SING N N 6 BSO C10 H102 SING N N 7 BSO C9 C8 SING N N 8 BSO C9 H9C1 SING N N 9 BSO C9 H9C2 SING N N 10 BSO C8 C7 SING N N 11 BSO C8 H8C1 SING N N 12 BSO C8 H8C2 SING N N 13 BSO C7 C2 SING N N 14 BSO C7 H7C1 SING N N 15 BSO C7 H7C2 SING N N 16 BSO C2 S1 SING N N 17 BSO C2 C4 SING N N 18 BSO C2 H2 SING N N 19 BSO S1 C6 SING N N 20 BSO S1 O10 DOUB N N 21 BSO C6 C5 SING N N 22 BSO C6 H6C1 SING N N 23 BSO C6 H6C2 SING N N 24 BSO C5 N1 SING N N 25 BSO C5 C4 SING N N 26 BSO C5 H5 SING N N 27 BSO N1 C3 SING N N 28 BSO N1 H1 SING N N 29 BSO C3 O3 DOUB N N 30 BSO C3 N2 SING N N 31 BSO N2 C4 SING N N 32 BSO N2 HA SING N N 33 BSO C4 H4 SING N N 34 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor BSO SMILES ACDLabs 10.04 "O=S2CC1NC(=O)NC1C2CCCCC(=O)O" BSO SMILES_CANONICAL CACTVS 3.341 "OC(=O)CCCC[C@H]1[C@H]2NC(=O)N[C@H]2C[S@]1=O" BSO SMILES CACTVS 3.341 "OC(=O)CCCC[CH]1[CH]2NC(=O)N[CH]2C[S]1=O" BSO SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C1[C@H]2[C@@H]([C@@H]([S@]1=O)CCCCC(=O)O)NC(=O)N2" BSO SMILES "OpenEye OEToolkits" 1.5.0 "C1C2C(C(S1=O)CCCCC(=O)O)NC(=O)N2" BSO InChI InChI 1.03 "InChI=1S/C10H16N2O4S/c13-8(14)4-2-1-3-7-9-6(5-17(7)16)11-10(15)12-9/h6-7,9H,1-5H2,(H,13,14)(H2,11,12,15)/t6-,7-,9-,17-/m0/s1" BSO InChIKey InChI 1.03 KCSKCIQYNAOBNQ-OKPRWBIXSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BSO "SYSTEMATIC NAME" ACDLabs 10.04 "5-[(3aS,4S,5S,6aR)-5-oxido-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoic acid" BSO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "5-[(3aS,4S,5S,6aR)-2,5-dioxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site BSO "Create component" 2005-09-19 EBI BSO "Modify descriptor" 2011-06-04 RCSB BSO "Modify synonyms" 2021-03-13 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id BSO _pdbx_chem_comp_synonyms.name "5-[(3AR,4R,6AS)-5-OXIDO-2-OXOHEXAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-4-YL]PENTANOIC ACID" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? ##