BIOTINYL-5-AMP
RNA linking
ATOMN
C20 H28 N7 O9 P S
0
2004-10-06
2012-01-05
N
REL
573.517
N
BT5
N
Corina
N
1WQW
RCSB
C11B
C
0
1
N
N
N
-19.222
-11.041
-6.891
2.111
1.224
-0.058
CBB
BT5
1
O11B
O
0
1
N
N
N
-19.722
-11.949
-6.197
0.826
1.118
-0.432
OBB
BT5
2
O12B
O
0
1
N
N
N
-17.981
-10.768
-6.828
2.402
1.851
0.933
OCB
BT5
3
C10B
C
0
1
N
N
N
-20.061
-10.212
-7.817
3.190
0.556
-0.871
CAB
BT5
4
C9B
C
0
1
N
N
N
-20.207
-8.768
-7.360
4.553
0.831
-0.232
C9B
BT5
5
C8B
C
0
1
N
N
N
-20.835
-7.874
-8.394
5.648
0.152
-1.057
C8B
BT5
6
C7B
C
0
1
N
N
N
-20.969
-6.445
-7.899
7.011
0.427
-0.419
C7B
BT5
7
C2B
C
0
1
N
N
S
-21.603
-5.479
-8.894
8.107
-0.251
-1.244
C2B
BT5
8
S1B
S
0
1
N
N
N
-21.714
-3.799
-8.300
7.951
-2.082
-1.156
S1B
BT5
9
C6B
C
0
1
N
N
N
-22.573
-3.385
-9.835
9.737
-2.403
-1.452
C6B
BT5
10
C5B
C
0
1
N
N
R
-23.622
-4.505
-9.944
10.418
-1.218
-0.740
C5B
BT5
11
N1B
N
0
1
N
N
N
-24.813
-4.250
-9.115
10.699
-1.587
0.656
N1B
BT5
12
C3B
C
0
1
N
N
N
-24.962
-5.221
-8.185
10.057
-0.739
1.471
C3B
BT5
13
O3B
O
0
1
N
N
N
-25.877
-5.276
-7.329
10.115
-0.812
2.683
O3B
BT5
14
N2B
N
0
1
N
N
N
-23.964
-6.156
-8.297
9.347
0.198
0.828
N2B
BT5
15
C4B
C
0
1
N
N
S
-23.050
-5.827
-9.369
9.495
0.001
-0.623
C4B
BT5
16
P
P
0
1
N
N
R
-19.336
-13.056
-5.149
-0.268
1.855
0.492
P
BT5
17
O1P
O
0
1
N
N
N
-17.890
-13.456
-5.324
0.086
3.285
0.630
OP1
BT5
18
O2P
O
0
1
N
N
N
-20.129
-14.174
-5.332
-0.292
1.166
1.947
OP2
BT5
19
O5*
O
0
1
N
N
N
-19.584
-12.448
-3.633
-1.721
1.724
-0.188
O5'
BT5
20
C5*
C
0
1
N
N
N
-18.911
-11.323
-3.173
-2.886
2.363
0.336
C5'
BT5
21
C4*
C
0
1
N
N
R
-18.339
-11.561
-1.777
-4.091
2.032
-0.547
C4'
BT5
22
O4*
O
0
1
N
N
N
-17.351
-10.591
-1.454
-4.394
0.630
-0.455
O4'
BT5
23
C3*
C
0
1
N
N
S
-19.397
-11.511
-0.705
-5.331
2.803
-0.053
C3'
BT5
24
O3*
O
0
1
N
N
N
-19.587
-12.797
-0.106
-5.826
3.664
-1.079
O3'
BT5
25
C2*
C
0
1
N
N
R
-18.940
-10.452
0.289
-6.362
1.694
0.270
C2'
BT5
26
O2*
O
0
1
N
N
N
-18.770
-10.963
1.595
-7.670
2.073
-0.163
O2'
BT5
27
C1*
C
0
1
N
N
R
-17.639
-9.875
-0.257
-5.828
0.501
-0.563
C1'
BT5
28
N9
N
0
1
Y
N
N
-17.691
-8.378
-0.631
-6.276
-0.770
0.011
N9
BT5
29
C8
C
0
1
Y
N
N
-18.742
-7.515
-0.427
-5.617
-1.510
0.947
C8
BT5
30
N7
N
0
1
Y
N
N
-18.425
-6.280
-0.890
-6.300
-2.580
1.230
N7
BT5
31
C5
C
0
1
Y
N
N
-17.180
-6.338
-1.389
-7.438
-2.596
0.496
C5
BT5
32
C6
C
0
1
Y
N
N
-16.393
-5.352
-1.984
-8.528
-3.475
0.382
C6
BT5
33
N6
N
0
1
N
N
N
-16.853
-4.109
-2.133
-8.586
-4.634
1.136
N6
BT5
34
N1
N
0
1
Y
N
N
-15.106
-5.720
-2.415
-9.504
-3.167
-0.467
N1
BT5
35
C2
C
0
1
Y
N
N
-14.619
-7.021
-2.265
-9.458
-2.064
-1.191
C2
BT5
36
N3
N
0
1
Y
N
N
-15.416
-8.002
-1.671
-8.457
-1.212
-1.117
N3
BT5
37
C4
C
0
1
Y
N
N
-16.685
-7.651
-1.241
-7.439
-1.432
-0.292
C4
BT5
38
1H10
H
0
0
N
N
N
-19.584
-10.213
-8.808
3.011
-0.519
-0.898
H101
BT5
39
2H10
H
0
0
N
N
N
-21.068
-10.655
-7.836
3.178
0.953
-1.886
H102
BT5
40
1H9B
H
0
0
N
N
N
-20.843
-8.755
-6.463
4.732
1.906
-0.205
H9B1
BT5
41
2H9B
H
0
0
N
N
N
-19.195
-8.383
-7.166
4.565
0.434
0.783
H9B2
BT5
42
1H8B
H
0
0
N
N
N
-20.202
-7.877
-9.294
5.470
-0.923
-1.085
H8B1
BT5
43
2H8B
H
0
0
N
N
N
-21.843
-8.257
-8.612
5.636
0.549
-2.073
H8B2
BT5
44
1H7B
H
0
0
N
N
N
-21.601
-6.460
-6.999
7.190
1.502
-0.392
H7B1
BT5
45
2H7B
H
0
0
N
N
N
-19.947
-6.080
-7.718
7.023
0.031
0.596
H7B2
BT5
46
H2B
H
0
1
N
N
N
-20.898
-5.583
-9.732
8.076
0.090
-2.279
H2B
BT5
47
1H6B
H
0
0
N
N
N
-23.040
-2.390
-9.787
10.039
-3.349
-1.002
H6B1
BT5
48
2H6B
H
0
0
N
N
N
-21.904
-3.329
-10.706
9.960
-2.393
-2.519
H6B2
BT5
49
H5B
H
0
1
N
N
N
-23.880
-4.557
-11.012
11.342
-0.950
-1.253
H5B
BT5
50
H1B
H
0
1
N
N
N
-25.426
-3.468
-9.225
11.258
-2.327
0.941
H1B
BT5
51
H4
H
0
1
N
N
N
-23.879
-6.962
-7.712
8.820
0.894
1.251
H4
BT5
52
H4B
H
0
1
N
N
N
-22.975
-6.686
-10.052
9.960
0.873
-1.081
H4B
BT5
53
H2P
H
0
1
N
N
N
-20.311
-14.286
-6.258
-0.517
0.225
1.933
H2P
BT5
54
1H5*
H
0
1
N
N
N
-18.086
-11.093
-3.863
-3.070
2.007
1.350
H5'
BT5
55
2H5*
H
0
0
N
N
N
-19.621
-10.484
-3.124
-2.733
3.442
0.352
H5''
BT5
56
H4*
H
0
1
N
N
N
-17.898
-12.568
-1.805
-3.875
2.298
-1.582
H4'
BT5
57
H3*
H
0
1
N
N
N
-20.383
-11.243
-1.113
-5.091
3.376
0.843
H3'
BT5
58
H2
H
0
1
N
N
N
-19.629
-13.460
-0.785
-6.607
4.173
-0.822
H2
BT5
59
H1
H
0
1
N
N
N
-19.712
-9.674
0.388
-6.360
1.458
1.334
H1
BT5
60
H2*
H
0
1
N
N
N
-18.732
-11.912
1.562
-8.011
2.870
0.266
H2'
BT5
61
H1*
H
0
1
N
N
N
-16.886
-9.972
0.539
-6.144
0.587
-1.603
H1'
BT5
62
H8
H
0
1
N
N
N
-19.682
-7.781
0.034
-4.667
-1.246
1.389
H8
BT5
63
1HN6
H
0
0
N
N
N
-16.968
-3.686
-1.234
-7.868
-4.847
1.752
HN61
BT5
64
2HN6
H
0
0
N
N
N
-16.201
-3.575
-2.672
-9.344
-5.233
1.048
HN62
BT5
65
H3
H
0
1
N
N
N
-13.625
-7.268
-2.609
-10.272
-1.852
-1.868
H3
BT5
66
sing
N
N
1
doub
N
N
2
sing
N
N
3
sing
N
N
4
sing
N
N
5
sing
N
N
6
sing
N
N
7
sing
N
N
8
sing
N
N
9
sing
N
N
10
sing
N
N
11
sing
N
N
12
sing
N
N
13
sing
N
N
14
sing
N
N
15
sing
N
N
16
sing
N
N
17
sing
N
N
18
sing
N
N
19
sing
N
N
20
sing
N
N
21
sing
N
N
22
sing
N
N
23
sing
N
N
24
sing
N
N
25
sing
N
N
26
sing
N
N
27
sing
N
N
28
doub
N
N
29
sing
N
N
30
sing
N
N
31
sing
N
N
32
sing
N
N
33
doub
N
N
34
sing
N
N
35
sing
N
N
36
sing
N
N
37
sing
N
N
38
sing
N
N
39
sing
N
N
40
sing
N
N
41
sing
N
N
42
sing
N
N
43
sing
N
N
44
sing
N
N
45
sing
N
N
46
sing
N
N
47
sing
N
N
48
sing
N
N
49
sing
N
N
50
sing
N
N
51
sing
N
N
52
sing
N
N
53
sing
N
N
54
sing
N
N
55
sing
Y
N
56
sing
Y
N
57
doub
Y
N
58
sing
N
N
59
sing
Y
N
60
doub
Y
N
61
sing
Y
N
62
sing
N
N
63
sing
Y
N
64
sing
N
N
65
sing
N
N
66
doub
Y
N
67
sing
Y
N
68
sing
N
N
69
doub
Y
N
70
O=C1NC2C(SCC2N1)CCCCC(=O)OP(=O)(O)OCC5OC(n3c4ncnc(N)c4nc3)C(O)C5O
InChI=1S/C20H28N7O9PS/c21-17-14-18(23-7-22-17)27(8-24-14)19-16(30)15(29)10(35-19)5-34-37(32,33)36-12(28)4-2-1-3-11-13-9(6-38-11)25-20(31)26-13/h7-11,13,15-16,19,29-30H,1-6H2,(H,32,33)(H2,21,22,23)(H2,25,26,31)/t9-,10+,11-,13-,15+,16+,19+/m0/s1
UTQCSTJVMLODHM-RHCAYAJFSA-N
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(=O)OC(=O)CCCC[C@@H]4SC[C@@H]5NC(=O)N[C@H]45)[C@@H](O)[C@H]3O
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)OC(=O)CCCC[CH]4SC[CH]5NC(=O)N[CH]45)[CH](O)[CH]3O
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)OC(=O)CCCC[C@H]4[C@@H]5[C@H](CS4)NC(=O)N5)O)O)N
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OC(=O)CCCCC4C5C(CS4)NC(=O)N5)O)O)N
5'-O-[(R)-hydroxy({5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}oxy)phosphoryl]adenosine
[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl] 5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoate
RCSB
RCSB
RCSB
RCSB