data_BV3
#
_chem_comp.id BV3
_chem_comp.name
;1,3-BIS-([[3-(4-{3-[3-NITRO-5-(GALACTOPYRANOSYLOXY)-BENZOYLAMINO]-PROPYL}-PIPERAZIN-1-YL)-PROPYLAMINO-3,4-DIOXO-CYCLOBU
TENYL]-AMINO-ETHYL]-AMINO-CARBONYLOXY)-2-AMINO-PROPANE
;
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C63 H91 N15 O26"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms BV3
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2003-11-24
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 1474.482
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code BV3
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag Y
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1RDP
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
BV3 O24 O24 O 0 1 N N N -11.628 -22.486 2.472 11.080 -6.473 -10.912 O24 BV3 1
BV3 C60 C60 C 0 1 N N N -10.871 -21.402 2.997 10.336 -6.738 -9.727 C60 BV3 2
BV3 C59 C59 C 0 1 N N N -11.268 -21.127 4.460 11.266 -7.213 -8.611 C59 BV3 3
BV3 O23 O23 O 0 1 N N N -10.932 -22.245 5.286 12.159 -6.158 -8.264 O23 BV3 4
BV3 C58 C58 C 0 1 N N N -10.501 -19.895 4.976 10.450 -7.634 -7.386 C58 BV3 5
BV3 O22 O22 O 0 1 N N N -9.121 -20.214 5.109 9.813 -6.486 -6.819 O22 BV3 6
BV3 C62 C62 C 0 1 N N N -10.702 -18.736 4.012 9.373 -8.650 -7.788 C62 BV3 7
BV3 C63 C63 C 0 1 N N N -9.910 -17.496 4.489 8.454 -9.013 -6.626 C63 BV3 8
BV3 O26 O26 O 0 1 N N N -10.229 -16.400 3.632 7.490 -9.942 -7.087 O26 BV3 9
BV3 O25 O25 O 0 1 N N N -10.320 -19.065 2.665 8.546 -8.125 -8.838 O25 BV3 10
BV3 C61 C61 C 0 1 N N N -11.066 -20.174 2.134 9.269 -7.794 -10.026 C61 BV3 11
BV3 O19 O19 O 0 1 N N N -12.460 -19.865 2.115 9.868 -8.944 -10.621 O19 BV3 12
BV3 C56 C56 C 0 1 Y N N -12.804 -18.864 1.238 9.098 -9.648 -11.506 C56 BV3 13
BV3 C57 C57 C 0 1 Y N N -13.025 -19.135 -0.109 7.896 -10.207 -11.083 C57 BV3 14
BV3 C55 C55 C 0 1 Y N N -12.971 -17.558 1.698 9.522 -9.800 -12.823 C55 BV3 15
BV3 C54 C54 C 0 1 Y N N -13.352 -16.533 0.833 8.737 -10.518 -13.725 C54 BV3 16
BV3 N15 N15 N 1 1 N N N -13.468 -15.279 1.317 9.165 -10.676 -15.070 N15 BV3 17
BV3 O21 O21 O -1 1 N N N -13.149 -15.025 2.716 8.444 -11.326 -15.865 O21 BV3 18
BV3 O20 O20 O 0 1 N N N -13.820 -14.244 0.465 10.253 -10.162 -15.425 O20 BV3 19
BV3 C53 C53 C 0 1 Y N N -13.556 -16.816 -0.515 7.531 -11.081 -13.306 C53 BV3 20
BV3 C52 C52 C 0 1 Y N N -13.392 -18.113 -0.974 7.110 -10.925 -11.985 C52 BV3 21
BV3 C51 C51 C 0 1 N N N -13.584 -18.481 -2.441 5.852 -11.509 -11.548 C51 BV3 22
BV3 O18 O18 O 0 1 N N N -13.436 -19.642 -2.796 5.676 -11.807 -10.353 O18 BV3 23
BV3 N14 N14 N 0 1 N N N -13.871 -17.479 -3.261 4.864 -11.691 -12.522 N14 BV3 24
BV3 O1 O1 O 0 1 N N N ? ? ? 15.364 -8.286 -6.670 O1 BV3 25
BV3 C1 C1 C 0 1 N N N ? ? ? 15.207 -9.489 -7.402 C1 BV3 26
BV3 C2 C2 C 0 1 N N N ? ? ? 15.253 -10.661 -6.429 C2 BV3 27
BV3 O2 O2 O 0 1 N N N ? ? ? 16.513 -10.598 -5.746 O2 BV3 28
BV3 C3 C3 C 0 1 N N N ? ? ? 16.642 -11.588 -4.721 C3 BV3 29
BV3 O3 O3 O 0 1 N N N ? ? ? 17.888 -11.450 -4.040 O3 BV3 30
BV3 C4 C4 C 0 1 Y N N ? ? ? 18.133 -10.257 -3.432 C4 BV3 31
BV3 C5 C5 C 0 1 Y N N ? ? ? 17.280 -9.799 -2.427 C5 BV3 32
BV3 C6 C6 C 0 1 Y N N ? ? ? 17.550 -8.586 -1.827 C6 BV3 33
BV3 C7 C7 C 0 1 Y N N ? ? ? 18.633 -7.811 -2.186 C7 BV3 34
BV3 C8 C8 C 0 1 Y N N ? ? ? 19.485 -8.270 -3.191 C8 BV3 35
BV3 C9 C9 C 0 1 Y N N ? ? ? 19.235 -9.493 -3.814 C9 BV3 36
BV3 N1 N1 N 1 1 N N N ? ? ? 20.608 -7.492 -3.580 N1 BV3 37
BV3 O4 O4 O -1 1 N N N ? ? ? 20.815 -6.395 -3.007 O4 BV3 38
BV3 O5 O5 O 0 1 N N N ? ? ? 21.362 -7.923 -4.485 O5 BV3 39
BV3 C10 C10 C 0 1 N N N ? ? ? 16.643 -8.099 -0.756 C10 BV3 40
BV3 O6 O6 O 0 1 N N N ? ? ? 17.078 -7.327 0.094 O6 BV3 41
BV3 N2 N2 N 0 1 N N N ? ? ? 15.330 -8.551 -0.813 N2 BV3 42
BV3 C11 C11 C 0 1 N N N ? ? ? 14.328 -8.150 0.137 C11 BV3 43
BV3 C12 C12 C 0 1 N N N ? ? ? 13.579 -6.892 -0.296 C12 BV3 44
BV3 C13 C13 C 0 1 N N N ? ? ? 12.864 -7.032 -1.639 C13 BV3 45
BV3 N3 N3 N 0 1 N N N ? ? ? 11.887 -8.119 -1.643 N3 BV3 46
BV3 C14 C14 C 0 1 N N N ? ? ? 10.811 -7.857 -0.679 C14 BV3 47
BV3 C15 C15 C 0 1 N N N ? ? ? 9.785 -8.996 -0.685 C15 BV3 48
BV3 N4 N4 N 0 1 N N N ? ? ? 9.232 -9.195 -2.030 N4 BV3 49
BV3 C16 C16 C 0 1 N N N ? ? ? 10.308 -9.456 -2.994 C16 BV3 50
BV3 C17 C17 C 0 1 N N N ? ? ? 11.333 -8.316 -2.988 C17 BV3 51
BV3 C18 C18 C 0 1 N N N ? ? ? 8.257 -10.283 -2.034 C18 BV3 52
BV3 C19 C19 C 0 1 N N N ? ? ? 7.040 -9.984 -1.161 C19 BV3 53
BV3 C20 C20 C 0 1 N N N ? ? ? 6.283 -8.722 -1.569 C20 BV3 54
BV3 N5 N5 N 0 1 N N N ? ? ? 5.793 -8.782 -2.952 N5 BV3 55
BV3 C21 C21 C 0 1 Y N N ? ? ? 5.108 -7.813 -3.498 C21 BV3 56
BV3 C22 C22 C 0 1 Y N N ? ? ? 4.617 -6.603 -3.213 C22 BV3 57
BV3 N6 N6 N 0 1 N N N ? ? ? 4.575 -5.743 -2.196 N6 BV3 58
BV3 C23 C23 C 0 1 N N N ? ? ? 5.186 -6.011 -0.921 C23 BV3 59
BV3 C24 C24 C 0 1 N N N ? ? ? 5.046 -4.841 0.038 C24 BV3 60
BV3 N7 N7 N 0 1 N N N ? ? ? 3.663 -4.531 0.316 N7 BV3 61
BV3 C25 C25 C 0 1 N N N ? ? ? 2.945 -5.092 1.351 C25 BV3 62
BV3 O7 O7 O 0 1 N N N ? ? ? 3.373 -5.912 2.157 O7 BV3 63
BV3 O8 O8 O 0 1 N N N ? ? ? 1.666 -4.601 1.356 O8 BV3 64
BV3 C26 C26 C 0 1 N N N ? ? ? 0.807 -5.097 2.376 C26 BV3 65
BV3 C27 C27 C 0 1 N N N ? ? ? 0.086 -6.345 1.871 C27 BV3 66
BV3 N8 N8 N 0 1 N N N ? ? ? -0.757 -6.893 2.913 N8 BV3 67
BV3 C28 C28 C 0 1 N N N ? ? ? -0.751 -6.030 0.633 C28 BV3 68
BV3 O9 O9 O 0 1 N N N ? ? ? -1.384 -7.229 0.170 O9 BV3 69
BV3 C29 C29 C 0 1 N N N ? ? ? -2.171 -7.097 -0.939 C29 BV3 70
BV3 O10 O10 O 0 1 N N N ? ? ? -2.358 -6.044 -1.539 O10 BV3 71
BV3 N9 N9 N 0 1 N N N ? ? ? -2.717 -8.322 -1.277 N9 BV3 72
BV3 C30 C30 C 0 1 N N N ? ? ? -3.594 -8.528 -2.397 C30 BV3 73
BV3 C31 C31 C 0 1 N N N ? ? ? -2.829 -8.879 -3.662 C31 BV3 74
BV3 N10 N10 N 0 1 N N N ? ? ? -2.058 -10.120 -3.517 N10 BV3 75
BV3 C32 C32 C 0 1 Y N N ? ? ? -1.367 -10.638 -4.496 C32 BV3 76
BV3 C33 C33 C 0 1 Y N N ? ? ? -1.060 -10.416 -5.778 C33 BV3 77
BV3 N11 N11 N 0 1 N N N ? ? ? -1.310 -9.525 -6.738 N11 BV3 78
BV3 C34 C34 C 0 1 N N N ? ? ? -2.145 -8.373 -6.536 C34 BV3 79
BV3 C35 C35 C 0 1 N N N ? ? ? -2.256 -7.503 -7.786 C35 BV3 80
BV3 C36 C36 C 0 1 N N N ? ? ? -0.921 -6.936 -8.263 C36 BV3 81
BV3 N12 N12 N 0 1 N N N ? ? ? 0.055 -7.980 -8.569 N12 BV3 82
BV3 C37 C37 C 0 1 N N N ? ? ? -0.407 -8.815 -9.683 C37 BV3 83
BV3 C38 C38 C 0 1 N N N ? ? ? 0.617 -9.908 -10.008 C38 BV3 84
BV3 N13 N13 N 0 1 N N N ? ? ? 1.927 -9.321 -10.316 N13 BV3 85
BV3 C39 C39 C 0 1 N N N ? ? ? 2.390 -8.487 -9.200 C39 BV3 86
BV3 C40 C40 C 0 1 N N N ? ? ? 1.366 -7.394 -8.876 C40 BV3 87
BV3 C41 C41 C 0 1 N N N ? ? ? 2.904 -10.365 -10.624 C41 BV3 88
BV3 C42 C42 C 0 1 N N N ? ? ? 2.537 -11.160 -11.875 C42 BV3 89
BV3 C43 C43 C 0 1 N N N ? ? ? 3.556 -12.237 -12.241 C43 BV3 90
BV3 C44 C44 C 0 1 Y N N ? ? ? -0.237 -11.598 -5.889 C44 BV3 91
BV3 O11 O11 O 0 1 N N N ? ? ? 0.447 -12.213 -6.665 O11 BV3 92
BV3 C45 C45 C 0 1 Y N N ? ? ? -0.565 -11.859 -4.473 C45 BV3 93
BV3 O12 O12 O 0 1 N N N ? ? ? -0.232 -12.753 -3.739 O12 BV3 94
BV3 C46 C46 C 0 1 Y N N ? ? ? 4.035 -6.422 -4.523 C46 BV3 95
BV3 O13 O13 O 0 1 N N N ? ? ? 3.400 -5.641 -5.183 O13 BV3 96
BV3 C47 C47 C 0 1 Y N N ? ? ? 4.571 -7.757 -4.856 C47 BV3 97
BV3 O14 O14 O 0 1 N N N ? ? ? 4.507 -8.401 -5.870 O14 BV3 98
BV3 C48 C48 C 0 1 N N N ? ? ? 16.556 -13.000 -5.306 C48 BV3 99
BV3 O15 O15 O 0 1 N N N ? ? ? 17.684 -13.233 -6.153 O15 BV3 100
BV3 C49 C49 C 0 1 N N N ? ? ? 15.254 -13.149 -6.096 C49 BV3 101
BV3 O16 O16 O 0 1 N N N ? ? ? 15.197 -14.412 -6.747 O16 BV3 102
BV3 C50 C50 C 0 1 N N N ? ? ? 15.079 -12.022 -7.120 C50 BV3 103
BV3 O17 O17 O 0 1 N N N ? ? ? 16.043 -12.178 -8.162 O17 BV3 104
BV3 H24 H24 H 0 1 N N N -11.797 -22.337 1.549 10.483 -6.640 -11.658 H24 BV3 105
BV3 H60 H60 H 0 1 N N N -9.803 -21.667 2.985 9.858 -5.797 -9.429 H60 BV3 106
BV3 H59 H59 H 0 1 N N N -12.353 -20.951 4.501 11.883 -8.047 -8.963 H59 BV3 107
BV3 H23 H23 H 0 1 N N N -10.857 -23.025 4.749 12.290 -5.631 -9.067 H23 BV3 108
BV3 H58 H58 H 0 1 N N N -10.885 -19.599 5.964 11.109 -8.043 -6.612 H58 BV3 109
BV3 H22 H22 H 0 1 N N N -8.727 -20.285 4.247 9.505 -5.950 -7.564 H22 BV3 110
BV3 H62 H62 H 0 1 N N N -11.779 -18.512 4.005 9.845 -9.574 -8.142 H62 BV3 111
BV3 H631 1H63 H 0 0 N N N -10.187 -17.252 5.525 7.947 -8.120 -6.260 H631 BV3 112
BV3 H632 2H63 H 0 0 N N N -8.830 -17.701 4.453 9.032 -9.464 -5.820 H632 BV3 113
BV3 H26 H26 H 0 1 N N N -10.300 -15.605 4.147 7.532 -9.939 -8.058 H26 BV3 114
BV3 H61 H61 H 0 1 N N N -10.704 -20.368 1.114 8.554 -7.402 -10.757 H61 BV3 115
BV3 H57 H57 H 0 1 N N N -12.911 -20.142 -0.482 7.572 -10.083 -10.052 H57 BV3 116
BV3 H55 H55 H 0 1 N N N -12.802 -17.337 2.742 10.464 -9.359 -13.143 H55 BV3 117
BV3 H53 H53 H 0 1 N N N -13.840 -16.030 -1.198 6.917 -11.641 -14.007 H53 BV3 118
BV3 H14 H14 H 0 1 N N N -14.608 -17.496 -3.937 5.037 -11.373 -13.470 H14 BV3 119
BV3 HO1 HO1 H 0 1 N N N ? ? ? 15.478 -7.571 -7.318 HO1 BV3 120
BV3 H11A 1H1 H 0 0 N N N ? ? ? 14.247 -9.471 -7.921 H11A BV3 121
BV3 H12 2H1 H 0 1 N N N ? ? ? 16.015 -9.575 -8.130 H12 BV3 122
BV3 H2 H2 H 0 1 N N N ? ? ? 14.454 -10.522 -5.690 H2 BV3 123
BV3 H3 H3 H 0 1 N N N ? ? ? 15.843 -11.441 -3.983 H3 BV3 124
BV3 H5 H5 H 0 1 N N N ? ? ? 16.422 -10.398 -2.132 H5 BV3 125
BV3 H7 H7 H 0 1 N N N ? ? ? 18.827 -6.858 -1.699 H7 BV3 126
BV3 H9 H9 H 0 1 N N N ? ? ? 19.895 -9.856 -4.598 H9 BV3 127
BV3 HN2 HN2 H 0 1 N N N ? ? ? 15.032 -9.142 -1.587 HN2 BV3 128
BV3 H111 1H11 H 0 0 N N N ? ? ? 13.628 -8.986 0.233 H111 BV3 129
BV3 H112 2H11 H 0 0 N N N ? ? ? 14.822 -8.010 1.104 H112 BV3 130
BV3 H121 1H12 H 0 0 N N N ? ? ? 12.838 -6.630 0.469 H121 BV3 131
BV3 H122 2H12 H 0 0 N N N ? ? ? 14.294 -6.061 -0.351 H122 BV3 132
BV3 H131 1H13 H 0 0 N N N ? ? ? 12.341 -6.111 -1.912 H131 BV3 133
BV3 H132 2H13 H 0 0 N N N ? ? ? 13.591 -7.255 -2.426 H132 BV3 134
BV3 H141 1H14 H 0 0 N N N ? ? ? 10.311 -6.906 -0.904 H141 BV3 135
BV3 H142 2H14 H 0 0 N N N ? ? ? 11.234 -7.774 0.329 H142 BV3 136
BV3 H151 1H15 H 0 0 N N N ? ? ? 10.253 -9.919 -0.316 H151 BV3 137
BV3 H152 2H15 H 0 0 N N N ? ? ? 8.977 -8.740 0.011 H152 BV3 138
BV3 H161 1H16 H 0 0 N N N ? ? ? 9.885 -9.538 -4.002 H161 BV3 139
BV3 H162 2H16 H 0 0 N N N ? ? ? 10.809 -10.407 -2.770 H162 BV3 140
BV3 H171 1H17 H 0 0 N N N ? ? ? 12.141 -8.572 -3.684 H171 BV3 141
BV3 H172 2H17 H 0 0 N N N ? ? ? 10.865 -7.393 -3.356 H172 BV3 142
BV3 H181 1H18 H 0 0 N N N ? ? ? 8.769 -11.194 -1.708 H181 BV3 143
BV3 H182 2H18 H 0 0 N N N ? ? ? 7.943 -10.425 -3.073 H182 BV3 144
BV3 H191 1H19 H 0 0 N N N ? ? ? 7.372 -9.886 -0.120 H191 BV3 145
BV3 H192 2H19 H 0 0 N N N ? ? ? 6.348 -10.834 -1.199 H192 BV3 146
BV3 H201 1H20 H 0 0 N N N ? ? ? 6.946 -7.853 -1.505 H201 BV3 147
BV3 H202 2H20 H 0 0 N N N ? ? ? 5.424 -8.541 -0.917 H202 BV3 148
BV3 HN5 HN5 H 0 1 N N N ? ? ? 6.004 -9.621 -3.492 HN5 BV3 149
BV3 HN6 HN6 H 0 1 N N N ? ? ? 4.081 -4.860 -2.349 HN6 BV3 150
BV3 H231 1H23 H 0 0 N N N ? ? ? 4.720 -6.915 -0.518 H231 BV3 151
BV3 H232 2H23 H 0 0 N N N ? ? ? 6.244 -6.218 -1.110 H232 BV3 152
BV3 H241 1H24 H 0 0 N N N ? ? ? 5.521 -5.077 0.995 H241 BV3 153
BV3 H242 2H24 H 0 0 N N N ? ? ? 5.512 -3.936 -0.366 H242 BV3 154
BV3 HN7 HN7 H 0 1 N N N ? ? ? 3.192 -3.861 -0.285 HN7 BV3 155
BV3 H261 1H26 H 0 0 N N N ? ? ? 1.411 -5.313 3.265 H261 BV3 156
BV3 H262 2H26 H 0 0 N N N ? ? ? 0.089 -4.306 2.620 H262 BV3 157
BV3 H27 H27 H 0 1 N N N ? ? ? 0.814 -7.133 1.644 H27 BV3 158
BV3 HN81 1HN8 H 0 0 N N N ? ? ? -0.350 -7.086 3.808 HN81 BV3 159
BV3 HN82 2HN8 H 0 0 N N N ? ? ? -1.658 -7.253 2.662 HN82 BV3 160
BV3 H281 1H28 H 0 0 N N N ? ? ? -0.120 -5.652 -0.178 H281 BV3 161
BV3 H282 2H28 H 0 0 N N N ? ? ? -1.528 -5.290 0.852 H282 BV3 162
BV3 HN9 HN9 H 0 1 N N N ? ? ? -2.484 -9.126 -0.697 HN9 BV3 163
BV3 H301 1H30 H 0 0 N N N ? ? ? -4.157 -7.600 -2.540 H301 BV3 164
BV3 H302 2H30 H 0 0 N N N ? ? ? -4.297 -9.321 -2.123 H302 BV3 165
BV3 H311 1H31 H 0 0 N N N ? ? ? -2.125 -8.087 -3.936 H311 BV3 166
BV3 H312 2H31 H 0 0 N N N ? ? ? -3.526 -9.030 -4.493 H312 BV3 167
BV3 H10 H10 H 0 1 N N N ? ? ? -2.075 -10.582 -2.608 H10 BV3 168
BV3 H11 H11 H 0 1 N N N ? ? ? -0.877 -9.688 -7.651 H11 BV3 169
BV3 H341 1H34 H 0 0 N N N ? ? ? -3.135 -8.745 -6.252 H341 BV3 170
BV3 H342 2H34 H 0 0 N N N ? ? ? -1.740 -7.810 -5.690 H342 BV3 171
BV3 H351 1H35 H 0 0 N N N ? ? ? -2.696 -8.093 -8.600 H351 BV3 172
BV3 H352 2H35 H 0 0 N N N ? ? ? -2.947 -6.677 -7.577 H352 BV3 173
BV3 H361 1H36 H 0 0 N N N ? ? ? -1.044 -6.320 -9.159 H361 BV3 174
BV3 H362 2H36 H 0 0 N N N ? ? ? -0.482 -6.310 -7.480 H362 BV3 175
BV3 H371 1H37 H 0 0 N N N ? ? ? -0.594 -8.204 -10.577 H371 BV3 176
BV3 H372 2H37 H 0 0 N N N ? ? ? -1.356 -9.296 -9.413 H372 BV3 177
BV3 H381 1H38 H 0 0 N N N ? ? ? 0.693 -10.608 -9.165 H381 BV3 178
BV3 H382 2H38 H 0 0 N N N ? ? ? 0.257 -10.477 -10.874 H382 BV3 179
BV3 H391 1H39 H 0 0 N N N ? ? ? 3.338 -8.007 -9.470 H391 BV3 180
BV3 H392 2H39 H 0 0 N N N ? ? ? 2.575 -9.099 -8.307 H392 BV3 181
BV3 H401 1H40 H 0 0 N N N ? ? ? 1.726 -6.825 -8.010 H401 BV3 182
BV3 H402 2H40 H 0 0 N N N ? ? ? 1.291 -6.693 -9.719 H402 BV3 183
BV3 H411 1H41 H 0 0 N N N ? ? ? 2.988 -11.013 -9.747 H411 BV3 184
BV3 H412 2H41 H 0 0 N N N ? ? ? 3.867 -9.865 -10.769 H412 BV3 185
BV3 H421 1H42 H 0 0 N N N ? ? ? 2.431 -10.461 -12.715 H421 BV3 186
BV3 H422 2H42 H 0 0 N N N ? ? ? 1.561 -11.637 -11.728 H422 BV3 187
BV3 H431 1H43 H 0 0 N N N ? ? ? 3.231 -12.765 -13.144 H431 BV3 188
BV3 H432 2H43 H 0 0 N N N ? ? ? 3.666 -12.974 -11.440 H432 BV3 189
BV3 H48 H48 H 0 1 N N N ? ? ? 16.617 -13.754 -4.514 H48 BV3 190
BV3 H15 H15 H 0 1 N N N ? ? ? 17.441 -12.896 -7.028 H15 BV3 191
BV3 H49 H49 H 0 1 N N N ? ? ? 14.411 -13.108 -5.395 H49 BV3 192
BV3 H16 H16 H 0 1 N N N ? ? ? 14.884 -14.247 -7.651 H16 BV3 193
BV3 H50 H50 H 0 1 N N N ? ? ? 14.091 -12.102 -7.588 H50 BV3 194
BV3 H17 H17 H 0 1 N N N ? ? ? 15.642 -11.810 -8.963 H17 BV3 195
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BV3 O24 C60 SING N N 1
BV3 O24 H24 SING N N 2
BV3 C60 C59 SING N N 3
BV3 C60 C61 SING N N 4
BV3 C60 H60 SING N N 5
BV3 C59 O23 SING N N 6
BV3 C59 C58 SING N N 7
BV3 C59 H59 SING N N 8
BV3 O23 H23 SING N N 9
BV3 C58 O22 SING N N 10
BV3 C58 C62 SING N N 11
BV3 C58 H58 SING N N 12
BV3 O22 H22 SING N N 13
BV3 C62 C63 SING N N 14
BV3 C62 O25 SING N N 15
BV3 C62 H62 SING N N 16
BV3 C63 O26 SING N N 17
BV3 C63 H631 SING N N 18
BV3 C63 H632 SING N N 19
BV3 O26 H26 SING N N 20
BV3 O25 C61 SING N N 21
BV3 C61 O19 SING N N 22
BV3 C61 H61 SING N N 23
BV3 O19 C56 SING N N 24
BV3 C56 C57 DOUB Y N 25
BV3 C56 C55 SING Y N 26
BV3 C57 C52 SING Y N 27
BV3 C57 H57 SING N N 28
BV3 C55 C54 DOUB Y N 29
BV3 C55 H55 SING N N 30
BV3 C54 N15 SING N N 31
BV3 C54 C53 SING Y N 32
BV3 N15 O21 SING N N 33
BV3 N15 O20 DOUB N N 34
BV3 C53 C52 DOUB Y N 35
BV3 C53 H53 SING N N 36
BV3 C52 C51 SING N N 37
BV3 C51 O18 DOUB N N 38
BV3 C51 N14 SING N N 39
BV3 N14 C43 SING N N 40
BV3 N14 H14 SING N N 41
BV3 O1 C1 SING N N 42
BV3 O1 HO1 SING N N 43
BV3 C1 C2 SING N N 44
BV3 C1 H11A SING N N 45
BV3 C1 H12 SING N N 46
BV3 C2 O2 SING N N 47
BV3 C2 C50 SING N N 48
BV3 C2 H2 SING N N 49
BV3 O2 C3 SING N N 50
BV3 C3 O3 SING N N 51
BV3 C3 C48 SING N N 52
BV3 C3 H3 SING N N 53
BV3 O3 C4 SING N N 54
BV3 C4 C5 DOUB Y N 55
BV3 C4 C9 SING Y N 56
BV3 C5 C6 SING Y N 57
BV3 C5 H5 SING N N 58
BV3 C6 C7 DOUB Y N 59
BV3 C6 C10 SING N N 60
BV3 C7 C8 SING Y N 61
BV3 C7 H7 SING N N 62
BV3 C8 C9 DOUB Y N 63
BV3 C8 N1 SING N N 64
BV3 C9 H9 SING N N 65
BV3 N1 O4 SING N N 66
BV3 N1 O5 DOUB N N 67
BV3 C10 O6 DOUB N N 68
BV3 C10 N2 SING N N 69
BV3 N2 C11 SING N N 70
BV3 N2 HN2 SING N N 71
BV3 C11 C12 SING N N 72
BV3 C11 H111 SING N N 73
BV3 C11 H112 SING N N 74
BV3 C12 C13 SING N N 75
BV3 C12 H121 SING N N 76
BV3 C12 H122 SING N N 77
BV3 C13 N3 SING N N 78
BV3 C13 H131 SING N N 79
BV3 C13 H132 SING N N 80
BV3 N3 C14 SING N N 81
BV3 N3 C17 SING N N 82
BV3 C14 C15 SING N N 83
BV3 C14 H141 SING N N 84
BV3 C14 H142 SING N N 85
BV3 C15 N4 SING N N 86
BV3 C15 H151 SING N N 87
BV3 C15 H152 SING N N 88
BV3 N4 C16 SING N N 89
BV3 N4 C18 SING N N 90
BV3 C16 C17 SING N N 91
BV3 C16 H161 SING N N 92
BV3 C16 H162 SING N N 93
BV3 C17 H171 SING N N 94
BV3 C17 H172 SING N N 95
BV3 C18 C19 SING N N 96
BV3 C18 H181 SING N N 97
BV3 C18 H182 SING N N 98
BV3 C19 C20 SING N N 99
BV3 C19 H191 SING N N 100
BV3 C19 H192 SING N N 101
BV3 C20 N5 SING N N 102
BV3 C20 H201 SING N N 103
BV3 C20 H202 SING N N 104
BV3 N5 C21 SING N N 105
BV3 N5 HN5 SING N N 106
BV3 C21 C22 DOUB Y N 107
BV3 C21 C47 SING Y N 108
BV3 C22 N6 SING N N 109
BV3 C22 C46 SING Y N 110
BV3 N6 C23 SING N N 111
BV3 N6 HN6 SING N N 112
BV3 C23 C24 SING N N 113
BV3 C23 H231 SING N N 114
BV3 C23 H232 SING N N 115
BV3 C24 N7 SING N N 116
BV3 C24 H241 SING N N 117
BV3 C24 H242 SING N N 118
BV3 N7 C25 SING N N 119
BV3 N7 HN7 SING N N 120
BV3 C25 O7 DOUB N N 121
BV3 C25 O8 SING N N 122
BV3 O8 C26 SING N N 123
BV3 C26 C27 SING N N 124
BV3 C26 H261 SING N N 125
BV3 C26 H262 SING N N 126
BV3 C27 N8 SING N N 127
BV3 C27 C28 SING N N 128
BV3 C27 H27 SING N N 129
BV3 N8 HN81 SING N N 130
BV3 N8 HN82 SING N N 131
BV3 C28 O9 SING N N 132
BV3 C28 H281 SING N N 133
BV3 C28 H282 SING N N 134
BV3 O9 C29 SING N N 135
BV3 C29 O10 DOUB N N 136
BV3 C29 N9 SING N N 137
BV3 N9 C30 SING N N 138
BV3 N9 HN9 SING N N 139
BV3 C30 C31 SING N N 140
BV3 C30 H301 SING N N 141
BV3 C30 H302 SING N N 142
BV3 C31 N10 SING N N 143
BV3 C31 H311 SING N N 144
BV3 C31 H312 SING N N 145
BV3 N10 C32 SING N N 146
BV3 N10 H10 SING N N 147
BV3 C32 C33 DOUB Y N 148
BV3 C32 C45 SING Y N 149
BV3 C33 N11 SING N N 150
BV3 C33 C44 SING Y N 151
BV3 N11 C34 SING N N 152
BV3 N11 H11 SING N N 153
BV3 C34 C35 SING N N 154
BV3 C34 H341 SING N N 155
BV3 C34 H342 SING N N 156
BV3 C35 C36 SING N N 157
BV3 C35 H351 SING N N 158
BV3 C35 H352 SING N N 159
BV3 C36 N12 SING N N 160
BV3 C36 H361 SING N N 161
BV3 C36 H362 SING N N 162
BV3 N12 C37 SING N N 163
BV3 N12 C40 SING N N 164
BV3 C37 C38 SING N N 165
BV3 C37 H371 SING N N 166
BV3 C37 H372 SING N N 167
BV3 C38 N13 SING N N 168
BV3 C38 H381 SING N N 169
BV3 C38 H382 SING N N 170
BV3 N13 C39 SING N N 171
BV3 N13 C41 SING N N 172
BV3 C39 C40 SING N N 173
BV3 C39 H391 SING N N 174
BV3 C39 H392 SING N N 175
BV3 C40 H401 SING N N 176
BV3 C40 H402 SING N N 177
BV3 C41 C42 SING N N 178
BV3 C41 H411 SING N N 179
BV3 C41 H412 SING N N 180
BV3 C42 C43 SING N N 181
BV3 C42 H421 SING N N 182
BV3 C42 H422 SING N N 183
BV3 C43 H431 SING N N 184
BV3 C43 H432 SING N N 185
BV3 C44 O11 DOUB N N 186
BV3 C44 C45 SING Y N 187
BV3 C45 O12 DOUB N N 188
BV3 C46 O13 DOUB N N 189
BV3 C46 C47 SING Y N 190
BV3 C47 O14 DOUB N N 191
BV3 C48 O15 SING N N 192
BV3 C48 C49 SING N N 193
BV3 C48 H48 SING N N 194
BV3 O15 H15 SING N N 195
BV3 C49 O16 SING N N 196
BV3 C49 C50 SING N N 197
BV3 C49 H49 SING N N 198
BV3 O16 H16 SING N N 199
BV3 C50 O17 SING N N 200
BV3 C50 H50 SING N N 201
BV3 O17 H17 SING N N 202
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
BV3 SMILES ACDLabs 10.04 "O=[N+]([O-])c2cc(cc(OC1OC(CO)C(O)C(O)C1O)c2)C(=O)NCCCN3CCN(CC3)CCCNC=4C(=O)C(=O)C=4NCCNC(=O)OCC(N)COC(=O)NCCNC=5C(=O)C(=O)C=5NCCCN6CCN(CC6)CCCNC(=O)c8cc(OC7OC(C(O)C(O)C7O)CO)cc([N+]([O-])=O)c8"
BV3 SMILES_CANONICAL CACTVS 3.341 "NC(COC(=O)NCCNC1=C(NCCCN2CCN(CCCNC(=O)c3cc(O[C@H]4O[C@H](CO)[C@H](O)[C@H](O)[C@H]4O)cc(c3)[N+]([O-])=O)CC2)C(=O)C1=O)COC(=O)NCCNC5=C(NCCCN6CCN(CCCNC(=O)c7cc(OC8OC(CO)C(O)C(O)C8O)cc(c7)[N+]([O-])=O)CC6)C(=O)C5=O"
BV3 SMILES CACTVS 3.341 "NC(COC(=O)NCCNC1=C(NCCCN2CCN(CCCNC(=O)c3cc(O[CH]4O[CH](CO)[CH](O)[CH](O)[CH]4O)cc(c3)[N+]([O-])=O)CC2)C(=O)C1=O)COC(=O)NCCNC5=C(NCCCN6CCN(CCCNC(=O)c7cc(OC8OC(CO)C(O)C(O)C8O)cc(c7)[N+]([O-])=O)CC6)C(=O)C5=O"
BV3 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1c(cc(cc1[N+](=O)[O-])O[C@@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O)O)C(=O)NCCCN3CCN(CC3)CCCNC4=C(C(=O)C4=O)NCCNC(=O)OCC(COC(=O)NCCNC5=C(C(=O)C5=O)NCCCN6CCN(CC6)CCCNC(=O)c7cc(cc(c7)O[C@@H]8[C@@H]([C@@H]([C@@H]([C@@H](O8)CO)O)O)O)[N+](=O)[O-])N"
BV3 SMILES "OpenEye OEToolkits" 1.5.0 "c1c(cc(cc1[N+](=O)[O-])OC2C(C(C(C(O2)CO)O)O)O)C(=O)NCCCN3CCN(CC3)CCCNC4=C(C(=O)C4=O)NCCNC(=O)OCC(COC(=O)NCCNC5=C(C(=O)C5=O)NCCCN6CCN(CC6)CCCNC(=O)c7cc(cc(c7)OC8C(C(C(C(O8)CO)O)O)O)[N+](=O)[O-])N"
BV3 InChI InChI 1.03 "InChI=1S/C63H91N15O26/c64-37(33-99-62(93)71-11-9-67-46-44(50(83)52(46)85)65-5-1-13-73-17-21-75(22-18-73)15-3-7-69-58(91)35-25-38(77(95)96)29-40(27-35)101-60-56(89)54(87)48(81)42(31-79)103-60)34-100-63(94)72-12-10-68-47-45(51(84)53(47)86)66-6-2-14-74-19-23-76(24-20-74)16-4-8-70-59(92)36-26-39(78(97)98)30-41(28-36)102-61-57(90)55(88)49(82)43(32-80)104-61/h25-30,37,42-43,48-49,54-57,60-61,65-68,79-82,87-90H,1-24,31-34,64H2,(H,69,91)(H,70,92)(H,71,93)(H,72,94)/t37?,42-,43?,48+,49?,54+,55?,56-,57?,60+,61?/m1/s1"
BV3 InChIKey InChI 1.03 HQTVCYHBYUXJDJ-ISUJOEFPSA-N
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BV3 "SYSTEMATIC NAME" ACDLabs 10.04 "2-amino-3-{[(2-{[2-({3-[4-(3-{[(3-nitro-5-{[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}phenyl)carbonyl]amino}propyl)piperazin-1-yl]propyl}amino)-3,4-dioxocyclobut-1-en-1-yl]amino}ethyl)carbamoyl]oxy}propyl (2-{[2-({3-[4-(3-{[(3-nitro-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}phenyl)carbonyl]amino}propyl)piperazin-1-yl]propyl}amino)-3,4-dioxocyclobut-1-en-1-yl]amino}ethyl)carbamate (non-preferred name)"
BV3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[2-amino-3-[2-[[2-[3-[4-[3-[[3-nitro-5-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-phenyl]carbonylamino]propyl]piperazin-1-yl]propylamino]-3,4-dioxo-1-cyclobutenyl]amino]ethylcarbamoyloxy]propyl] N-[2-[[2-[3-[4-[3-[[3-nitro-5-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-phenyl]carbonylamino]propyl]piperazin-1-yl]propylamino]-3,4-dioxo-1-cyclobutenyl]amino]ethyl]carbamate"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
BV3 "Create component" 2003-11-24 RCSB
BV3 "Modify descriptor" 2011-06-04 RCSB
BV3 "Modify synonyms" 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id BV3
_pdbx_chem_comp_synonyms.name BV3
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
##