data_BYS # _chem_comp.id BYS _chem_comp.name "2-BENZO[1,3]DIOXOL-5-YLMETHYL-3-BENZYL-SUCCINIC ACID" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H18 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2001-07-06 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 342.343 _chem_comp.one_letter_code ? _chem_comp.three_letter_code BYS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1JJE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal BYS C1 C1 C 0 1 N N S 24.096 -2.520 16.167 0.369 -0.109 1.635 C1 BYS 1 BYS C2 C2 C 0 1 N N N 24.773 -2.613 14.798 1.416 0.746 2.300 C2 BYS 2 BYS O3 O3 O 0 1 N N N 24.108 -2.584 13.753 1.699 1.825 1.835 O3 BYS 3 BYS O4 O4 O 0 1 N N N 26.013 -2.760 14.760 2.035 0.309 3.408 O4 BYS 4 BYS C5 C5 C 0 1 N N N 24.642 -3.700 17.006 -1.019 0.321 2.111 C5 BYS 5 BYS C6 C6 C 0 1 Y N N 24.302 -5.002 16.304 -1.137 0.085 3.594 C6 BYS 6 BYS C7 C7 C 0 1 Y N N 25.311 -5.805 15.817 -0.873 1.113 4.481 C7 BYS 7 BYS C8 C8 C 0 1 Y N N 25.011 -6.987 15.122 -0.982 0.896 5.842 C8 BYS 8 BYS C9 C9 C 0 1 Y N N 23.671 -7.396 15.035 -1.354 -0.347 6.316 C9 BYS 9 BYS C10 C10 C 0 1 Y N N 22.652 -6.575 15.498 -1.619 -1.374 5.430 C10 BYS 10 BYS C11 C11 C 0 1 Y N N 22.965 -5.380 16.148 -1.514 -1.156 4.069 C11 BYS 11 BYS C12 C12 C 0 1 N N S 24.481 -1.229 16.882 0.463 0.057 0.117 C12 BYS 12 BYS C13 C13 C 0 1 N N N 24.662 -0.120 15.875 1.861 -0.271 -0.339 C13 BYS 13 BYS O14 O14 O 0 1 N N N 23.912 -0.066 14.886 2.480 -1.156 0.202 O14 BYS 14 BYS O15 O15 O 0 1 N N N 25.565 0.713 16.148 2.418 0.418 -1.346 O15 BYS 15 BYS C16 C16 C 0 1 N N N 23.321 -0.820 17.828 -0.530 -0.887 -0.561 C16 BYS 16 BYS C17 C17 C 0 1 Y N N 23.648 0.377 18.674 -0.438 -0.723 -2.057 C17 BYS 17 BYS C18 C18 C 0 1 Y N N 23.306 1.683 18.269 -1.240 0.201 -2.699 C18 BYS 18 BYS C19 C19 C 0 1 Y N N 23.583 2.734 19.124 -1.153 0.357 -4.073 C19 BYS 19 BYS O20 O20 O 0 1 N N N 23.472 4.047 18.885 -1.816 1.184 -4.934 O20 BYS 20 BYS C21 C21 C 0 1 N N N 23.939 4.753 20.062 -1.035 1.187 -6.143 C21 BYS 21 BYS O22 O22 O 0 1 N N N 24.516 3.723 20.893 -0.371 -0.090 -6.124 O22 BYS 22 BYS C23 C23 C 0 1 Y N N 24.246 2.539 20.331 -0.265 -0.426 -4.805 C23 BYS 23 BYS C24 C24 C 0 1 Y N N 24.635 1.261 20.735 0.531 -1.354 -4.155 C24 BYS 24 BYS C25 C25 C 0 1 Y N N 24.326 0.185 19.882 0.443 -1.501 -2.783 C25 BYS 25 BYS HC11 1HC1 H 0 0 N N N 22.988 -2.544 16.044 0.535 -1.154 1.896 HC11 BYS 26 BYS HXT1 1HXT H 0 0 N N N 26.433 -2.817 13.910 2.707 0.859 3.834 HXT1 BYS 27 BYS HC51 1HC5 H 0 0 N N N 25.732 -3.602 17.216 -1.163 1.381 1.899 HC51 BYS 28 BYS HC52 2HC5 H 0 0 N N N 24.277 -3.677 18.059 -1.778 -0.259 1.589 HC52 BYS 29 BYS HC71 1HC7 H 0 0 N N N 26.358 -5.501 15.983 -0.583 2.084 4.110 HC71 BYS 30 BYS HC81 1HC8 H 0 0 N N N 25.812 -7.582 14.653 -0.775 1.698 6.534 HC81 BYS 31 BYS HC91 1HC9 H 0 0 N N N 23.415 -8.375 14.597 -1.438 -0.516 7.380 HC91 BYS 32 BYS H101 1H10 H 0 0 N N N 21.599 -6.870 15.350 -1.909 -2.346 5.800 H101 BYS 33 BYS H111 1H11 H 0 0 N N N 22.158 -4.736 16.537 -1.721 -1.959 3.376 H111 BYS 34 BYS H121 1H12 H 0 0 N N N 25.427 -1.392 17.448 0.226 1.087 -0.150 H121 BYS 35 BYS HXT2 2HXT H 0 0 N N N 25.679 1.411 15.514 3.315 0.207 -1.639 HXT2 BYS 36 BYS H161 1H16 H 0 0 N N N 22.378 -0.656 17.254 -0.293 -1.917 -0.294 H161 BYS 37 BYS H162 2H16 H 0 0 N N N 23.002 -1.680 18.461 -1.541 -0.649 -0.231 H162 BYS 38 BYS H181 1H18 H 0 0 N N N 22.827 1.880 17.295 -1.932 0.804 -2.130 H181 BYS 39 BYS H211 1H21 H 0 0 N N N 24.629 5.600 19.841 -0.306 1.997 -6.127 H211 BYS 40 BYS H212 2H21 H 0 0 N N N 23.154 5.361 20.569 -1.681 1.269 -7.017 H212 BYS 41 BYS H241 1H24 H 0 0 N N N 25.165 1.107 21.689 1.221 -1.963 -4.720 H241 BYS 42 BYS H251 1H25 H 0 0 N N N 24.623 -0.837 20.168 1.065 -2.225 -2.278 H251 BYS 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BYS C1 C2 SING N N 1 BYS C1 C5 SING N N 2 BYS C1 C12 SING N N 3 BYS C1 HC11 SING N N 4 BYS C2 O3 DOUB N N 5 BYS C2 O4 SING N N 6 BYS O4 HXT1 SING N N 7 BYS C5 C6 SING N N 8 BYS C5 HC51 SING N N 9 BYS C5 HC52 SING N N 10 BYS C6 C7 DOUB Y N 11 BYS C6 C11 SING Y N 12 BYS C7 C8 SING Y N 13 BYS C7 HC71 SING N N 14 BYS C8 C9 DOUB Y N 15 BYS C8 HC81 SING N N 16 BYS C9 C10 SING Y N 17 BYS C9 HC91 SING N N 18 BYS C10 C11 DOUB Y N 19 BYS C10 H101 SING N N 20 BYS C11 H111 SING N N 21 BYS C12 C13 SING N N 22 BYS C12 C16 SING N N 23 BYS C12 H121 SING N N 24 BYS C13 O14 DOUB N N 25 BYS C13 O15 SING N N 26 BYS O15 HXT2 SING N N 27 BYS C16 C17 SING N N 28 BYS C16 H161 SING N N 29 BYS C16 H162 SING N N 30 BYS C17 C18 DOUB Y N 31 BYS C17 C25 SING Y N 32 BYS C18 C19 SING Y N 33 BYS C18 H181 SING N N 34 BYS C19 O20 SING N N 35 BYS C19 C23 DOUB Y N 36 BYS O20 C21 SING N N 37 BYS C21 O22 SING N N 38 BYS C21 H211 SING N N 39 BYS C21 H212 SING N N 40 BYS O22 C23 SING N N 41 BYS C23 C24 SING Y N 42 BYS C24 C25 DOUB Y N 43 BYS C24 H241 SING N N 44 BYS C25 H251 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor BYS SMILES ACDLabs 10.04 "O=C(O)C(Cc1ccccc1)C(C(=O)O)Cc2ccc3OCOc3c2" BYS SMILES_CANONICAL CACTVS 3.341 "OC(=O)[C@@H](Cc1ccccc1)[C@H](Cc2ccc3OCOc3c2)C(O)=O" BYS SMILES CACTVS 3.341 "OC(=O)[CH](Cc1ccccc1)[CH](Cc2ccc3OCOc3c2)C(O)=O" BYS SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)C[C@@H]([C@H](Cc2ccc3c(c2)OCO3)C(=O)O)C(=O)O" BYS SMILES "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)CC(C(Cc2ccc3c(c2)OCO3)C(=O)O)C(=O)O" BYS InChI InChI 1.03 "InChI=1S/C19H18O6/c20-18(21)14(8-12-4-2-1-3-5-12)15(19(22)23)9-13-6-7-16-17(10-13)25-11-24-16/h1-7,10,14-15H,8-9,11H2,(H,20,21)(H,22,23)/t14-,15-/m0/s1" BYS InChIKey InChI 1.03 ASEJDWRSZYAIOT-GJZGRUSLSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BYS "SYSTEMATIC NAME" ACDLabs 10.04 "(2S,3S)-2-(1,3-benzodioxol-5-ylmethyl)-3-benzylbutanedioic acid" BYS "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S,3S)-2-(1,3-benzodioxol-5-ylmethyl)-3-(phenylmethyl)butanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site BYS "Create component" 2001-07-06 RCSB BYS "Modify descriptor" 2011-06-04 RCSB #