data_C27 # _chem_comp.id C27 _chem_comp.name "(6R)-2-amino-6-[2-(3'-methoxybiphenyl-3-yl)ethyl]-3,6-dimethyl-5,6-dihydropyrimidin-4(3H)-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H25 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2007-08-30 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 351.442 _chem_comp.one_letter_code ? _chem_comp.three_letter_code C27 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2VA7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal C27 C1 C1 C 0 1 N N N 70.757 46.114 0.728 8.116 -0.857 0.095 C1 C27 1 C27 O2 O2 O 0 1 N N N 70.866 46.850 1.953 7.052 0.088 0.224 O2 C27 2 C27 C3 C3 C 0 1 Y N N 71.743 46.393 2.903 5.785 -0.388 0.098 C3 C27 3 C27 C4 C4 C 0 1 Y N N 72.603 45.304 2.960 5.572 -1.738 -0.146 C4 C27 4 C27 C5 C5 C 0 1 Y N N 73.380 45.089 4.074 4.285 -2.226 -0.275 C5 C27 5 C27 C6 C6 C 0 1 Y N N 73.304 45.950 5.148 3.205 -1.374 -0.162 C6 C27 6 C27 C7 C7 C 0 1 Y N N 72.445 47.047 5.119 3.410 -0.018 0.083 C7 C27 7 C27 C8 C8 C 0 1 Y N N 71.673 47.255 3.980 4.707 0.473 0.218 C8 C27 8 C27 C9 C9 C 0 1 Y N N 72.368 47.990 6.273 2.251 0.901 0.204 C9 C27 9 C27 C10 C10 C 0 1 Y N N 73.487 48.241 7.066 2.456 2.257 0.449 C10 C27 10 C27 C11 C11 C 0 1 Y N N 73.401 49.094 8.150 1.374 3.107 0.561 C11 C27 11 C27 C12 C12 C 0 1 Y N N 72.213 49.729 8.441 0.088 2.614 0.431 C12 C27 12 C27 C13 C13 C 0 1 Y N N 71.080 49.494 7.669 -0.121 1.268 0.188 C13 C27 13 C27 C14 C14 C 0 1 N N N 69.780 50.191 7.979 -1.525 0.739 0.046 C14 C27 14 C27 C15 C15 C 0 1 N N N 68.920 49.417 8.959 -1.888 0.798 -1.204 C15 C27 15 C27 C16 C16 C 0 1 N N R 67.455 49.919 9.119 -3.267 0.155 -1.366 C16 C27 16 C27 C17 C17 C 0 1 N N N 67.433 51.400 9.528 -3.539 0.105 -2.640 C17 C27 17 C27 C18 C18 C 0 1 N N N 66.762 49.059 10.180 -4.306 1.074 -0.691 C18 C27 18 C27 C19 C19 C 0 1 N N N 66.534 47.654 9.711 -5.126 0.440 0.417 C19 C27 19 C27 O20 O20 O 0 1 N N N 66.557 46.711 10.476 -5.969 1.080 1.009 O20 C27 20 C27 N21 N21 N 0 1 N N N 66.273 47.499 8.375 -4.896 -0.849 0.727 N21 C27 21 C27 C22 C22 C 0 1 N N N 66.158 46.134 7.841 -5.690 -1.458 1.797 C22 C27 22 C27 C23 C23 C 0 1 N N N 66.172 48.627 7.527 -3.959 -1.622 0.095 C23 C27 23 C27 N24 N24 N 0 1 N N N 66.721 49.783 7.831 -3.187 -1.225 -0.863 N24 C27 24 C27 N25 N25 N 0 1 N N N 65.555 48.487 6.354 -3.829 -2.925 0.514 N25 C27 25 C27 C26 C26 C 0 1 Y N N 71.171 48.621 6.593 0.954 0.411 0.068 C26 C27 26 C27 H1C1 1H1C H 0 0 N N N 70.729 46.814 -0.120 9.071 -0.348 0.216 H1C1 C27 27 C27 H1C2 2H1C H 0 0 N N N 71.625 45.446 0.623 8.014 -1.626 0.861 H1C2 C27 28 C27 H1C3 3H1C H 0 0 N N N 69.833 45.517 0.740 8.073 -1.319 -0.892 H1C3 C27 29 C27 H4 H4 H 0 1 N N N 72.662 44.622 2.125 6.413 -2.409 -0.235 H4 C27 30 C27 H8 H8 H 0 1 N N N 71.008 48.105 3.937 4.871 1.523 0.412 H8 C27 31 C27 H5 H5 H 0 1 N N N 74.051 44.244 4.108 4.124 -3.277 -0.464 H5 C27 32 C27 H6 H6 H 0 1 N N N 73.916 45.773 6.020 2.201 -1.758 -0.264 H6 C27 33 C27 H10 H10 H 0 1 N N N 74.428 47.765 6.831 3.459 2.643 0.552 H10 C27 34 C27 H26 H26 H 0 1 N N N 70.294 48.428 5.993 0.790 -0.639 -0.126 H26 C27 35 C27 H11 H11 H 0 1 N N N 74.268 49.264 8.771 1.532 4.158 0.751 H11 C27 36 C27 H12 H12 H 0 1 N N N 72.161 50.414 9.274 -0.756 3.282 0.520 H12 C27 37 C27 H141 1H14 H 0 0 N N N 70.009 51.173 8.418 -1.559 -0.296 0.386 H141 C27 38 C27 H142 2H14 H 0 0 N N N 69.217 50.280 7.039 -2.203 1.342 0.651 H142 C27 39 C27 H151 1H15 H 0 0 N N N 68.875 48.376 8.606 -1.935 1.841 -1.520 H151 C27 40 C27 H152 2H15 H 0 0 N N N 69.393 49.546 9.944 -1.163 0.265 -1.819 H152 C27 41 C27 H171 1H17 H 0 0 N N N 67.428 51.478 10.625 -2.830 -0.558 -3.137 H171 C27 42 C27 H172 2H17 H 0 0 N N N 68.326 51.904 9.129 -4.551 -0.274 -2.781 H172 C27 43 C27 H173 3H17 H 0 0 N N N 66.530 51.879 9.122 -3.462 1.105 -3.067 H173 C27 44 C27 H181 1H18 H 0 0 N N N 67.398 49.030 11.077 -3.781 1.935 -0.277 H181 C27 45 C27 H182 2H18 H 0 0 N N N 65.781 49.509 10.392 -4.991 1.435 -1.458 H182 C27 46 C27 H221 1H22 H 0 0 N N N 66.129 46.171 6.742 -6.323 -0.699 2.256 H221 C27 47 C27 H222 2H22 H 0 0 N N N 67.025 45.539 8.165 -6.314 -2.249 1.381 H222 C27 48 C27 H223 3H22 H 0 0 N N N 65.234 45.670 8.216 -5.023 -1.879 2.550 H223 C27 49 C27 H251 1H25 H 0 0 N N N 65.213 47.553 6.254 -4.439 -3.285 1.176 H251 C27 50 C27 H252 2H25 H 0 0 N N N 65.449 49.211 5.673 -3.126 -3.485 0.146 H252 C27 51 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C27 C1 O2 SING N N 1 C27 O2 C3 SING N N 2 C27 C3 C4 SING Y N 3 C27 C3 C8 DOUB Y N 4 C27 C4 C5 DOUB Y N 5 C27 C5 C6 SING Y N 6 C27 C6 C7 DOUB Y N 7 C27 C7 C8 SING Y N 8 C27 C7 C9 SING Y N 9 C27 C9 C10 SING Y N 10 C27 C9 C26 DOUB Y N 11 C27 C10 C11 DOUB Y N 12 C27 C11 C12 SING Y N 13 C27 C12 C13 DOUB Y N 14 C27 C13 C14 SING N N 15 C27 C13 C26 SING Y N 16 C27 C14 C15 SING N N 17 C27 C15 C16 SING N N 18 C27 C16 C17 SING N N 19 C27 C16 C18 SING N N 20 C27 C16 N24 SING N N 21 C27 C18 C19 SING N N 22 C27 C19 O20 DOUB N N 23 C27 C19 N21 SING N N 24 C27 N21 C22 SING N N 25 C27 N21 C23 SING N N 26 C27 C23 N24 DOUB N N 27 C27 C23 N25 SING N N 28 C27 C1 H1C1 SING N N 29 C27 C1 H1C2 SING N N 30 C27 C1 H1C3 SING N N 31 C27 C4 H4 SING N N 32 C27 C8 H8 SING N N 33 C27 C5 H5 SING N N 34 C27 C6 H6 SING N N 35 C27 C10 H10 SING N N 36 C27 C26 H26 SING N N 37 C27 C11 H11 SING N N 38 C27 C12 H12 SING N N 39 C27 C14 H141 SING N N 40 C27 C14 H142 SING N N 41 C27 C15 H151 SING N N 42 C27 C15 H152 SING N N 43 C27 C17 H171 SING N N 44 C27 C17 H172 SING N N 45 C27 C17 H173 SING N N 46 C27 C18 H181 SING N N 47 C27 C18 H182 SING N N 48 C27 C22 H221 SING N N 49 C27 C22 H222 SING N N 50 C27 C22 H223 SING N N 51 C27 N25 H251 SING N N 52 C27 N25 H252 SING N N 53 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor C27 SMILES ACDLabs 10.04 "O=C3N(C(=NC(CCc2cccc(c1cccc(OC)c1)c2)(C3)C)N)C" C27 SMILES_CANONICAL CACTVS 3.341 "COc1cccc(c1)c2cccc(CC[C@]3(C)CC(=O)N(C)C(=N3)N)c2" C27 SMILES CACTVS 3.341 "COc1cccc(c1)c2cccc(CC[C]3(C)CC(=O)N(C)C(=N3)N)c2" C27 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@]1(CC(=O)N(C(=N1)N)C)CCc2cccc(c2)c3cccc(c3)OC" C27 SMILES "OpenEye OEToolkits" 1.5.0 "CC1(CC(=O)N(C(=N1)N)C)CCc2cccc(c2)c3cccc(c3)OC" C27 InChI InChI 1.03 "InChI=1S/C21H25N3O2/c1-21(14-19(25)24(2)20(22)23-21)11-10-15-6-4-7-16(12-15)17-8-5-9-18(13-17)26-3/h4-9,12-13H,10-11,14H2,1-3H3,(H2,22,23)/t21-/m1/s1" C27 InChIKey InChI 1.03 VDFBMQAUECXNKR-OAQYLSRUSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier C27 "SYSTEMATIC NAME" ACDLabs 10.04 "(6R)-2-amino-6-[2-(3'-methoxybiphenyl-3-yl)ethyl]-3,6-dimethyl-5,6-dihydropyrimidin-4(3H)-one" C27 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(6R)-2-amino-6-[2-[3-(3-methoxyphenyl)phenyl]ethyl]-3,6-dimethyl-5H-pyrimidin-4-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site C27 "Create component" 2007-08-30 EBI C27 "Modify aromatic_flag" 2011-06-04 RCSB C27 "Modify descriptor" 2011-06-04 RCSB #