data_C3M # _chem_comp.id C3M _chem_comp.name "N-[(2R,3S)-3-AMINO-2-HYDROXY-4-PHENYLBUTYL]NAPHTHALENE-2-SULFONAMIDE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H22 N2 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "INHIBITOR OF THROMBIN" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2005-12-08 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 370.465 _chem_comp.one_letter_code ? _chem_comp.three_letter_code C3M _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2C8Y _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal C3M N1 N1 N 0 1 N N N 7.829 21.306 51.810 -2.814 0.458 1.377 N1 C3M 1 C3M C2 C2 C 0 1 N N S 6.552 20.707 51.402 -2.741 0.477 -0.091 C2 C3M 2 C3M C3 C3 C 0 1 N N N 5.598 21.824 51.007 -4.113 0.838 -0.664 C3 C3M 3 C3M C4 C4 C 0 1 Y N N 4.140 21.472 51.178 -5.100 -0.249 -0.328 C4 C3M 4 C3M C5 C5 C 0 1 Y N N 3.248 21.758 50.159 -5.830 -0.182 0.844 C5 C3M 5 C3M C6 C6 C 0 1 Y N N 1.909 21.436 50.308 -6.736 -1.180 1.152 C6 C3M 6 C3M C7 C7 C 0 1 Y N N 1.447 20.849 51.472 -6.912 -2.245 0.288 C7 C3M 7 C3M C8 C8 C 0 1 Y N N 2.335 20.570 52.484 -6.183 -2.311 -0.884 C8 C3M 8 C3M C9 C9 C 0 1 Y N N 3.670 20.898 52.356 -5.280 -1.311 -1.195 C9 C3M 9 C3M C10 C10 C 0 1 N N R 6.855 19.861 50.183 -1.712 1.517 -0.537 C10 C3M 10 C3M O11 O11 O 0 1 N N N 7.210 20.672 49.057 -1.641 1.536 -1.964 O11 C3M 11 C3M C12 C12 C 0 1 N N N 5.592 19.103 49.801 -0.340 1.156 0.037 C12 C3M 12 C3M N13 N13 N 0 1 N N N 6.010 18.107 48.815 0.620 2.214 -0.290 N13 C3M 13 C3M S14 S14 S 0 1 N N N 4.877 17.097 48.192 2.073 2.286 0.502 S14 C3M 14 C3M O15 O15 O 0 1 N N N 5.517 16.442 47.100 1.767 2.152 1.883 O15 C3M 15 C3M O16 O16 O 0 1 N N N 4.379 16.448 49.355 2.776 3.374 -0.083 O16 C3M 16 C3M C17 C17 C 0 1 Y N N 3.576 18.014 47.415 2.981 0.840 0.069 C17 C3M 17 C3M C18 C18 C 0 1 Y N N 3.868 18.648 46.192 3.820 0.864 -1.044 C18 C3M 18 C3M C19 C19 C 0 1 Y N N 2.943 19.390 45.494 4.536 -0.236 -1.406 C19 C3M 19 C3M C20 C20 C 0 1 Y N N 1.645 19.513 46.028 4.430 -1.415 -0.648 C20 C3M 20 C3M C21 C21 C 0 1 Y N N 0.661 20.240 45.346 5.153 -2.569 -0.990 C21 C3M 21 C3M C22 C22 C 0 1 Y N N -0.590 20.333 45.896 5.026 -3.693 -0.232 C22 C3M 22 C3M C23 C23 C 0 1 Y N N -0.909 19.717 47.107 4.187 -3.717 0.881 C23 C3M 23 C3M C24 C24 C 0 1 Y N N 0.031 18.998 47.788 3.471 -2.617 1.242 C24 C3M 24 C3M C25 C25 C 0 1 Y N N 1.331 18.872 47.281 3.577 -1.439 0.484 C25 C3M 25 C3M C26 C26 C 0 1 Y N N 2.321 18.116 47.972 2.858 -0.282 0.829 C26 C3M 26 C3M H1N1 1H1N H 0 0 N N N 7.658 22.187 52.250 -3.091 1.384 1.665 H1N1 C3M 27 C3M H1N2 2H1N H 0 0 N N N 8.406 21.442 51.005 -3.572 -0.161 1.621 H1N2 C3M 28 C3M H2 H2 H 0 1 N N N 6.099 20.110 52.207 -2.444 -0.507 -0.452 H2 C3M 29 C3M H3C1 1H3C H 0 0 N N N 5.758 22.021 49.937 -4.450 1.781 -0.234 H3C1 C3M 30 C3M H3C2 2H3C H 0 0 N N N 5.814 22.696 51.641 -4.038 0.940 -1.747 H3C2 C3M 31 C3M H5 H5 H 0 1 N N N 3.594 22.230 49.252 -5.692 0.650 1.519 H5 C3M 32 C3M H6 H6 H 0 1 N N N 1.217 21.646 49.505 -7.305 -1.128 2.068 H6 C3M 33 C3M H7 H7 H 0 1 N N N 0.399 20.612 51.585 -7.619 -3.025 0.530 H7 C3M 34 C3M H8 H8 H 0 1 N N N 1.985 20.090 53.386 -6.320 -3.143 -1.559 H8 C3M 35 C3M H9 H9 H 0 1 N N N 4.352 20.709 53.172 -4.711 -1.363 -2.111 H9 C3M 36 C3M H10 H10 H 0 1 N N N 7.691 19.191 50.431 -2.009 2.502 -0.175 H10 C3M 37 C3M H11 H11 H 0 1 N N N 7.289 21.578 49.331 -1.375 0.649 -2.242 H11 C3M 38 C3M H121 1H12 H 0 0 N N N 4.824 19.777 49.394 -0.415 1.055 1.120 H121 C3M 39 C3M H122 2H12 H 0 0 N N N 5.148 18.616 50.682 -0.003 0.213 -0.394 H122 C3M 40 C3M H13 H13 H 0 1 N N N 6.395 18.614 48.044 0.404 2.871 -0.970 H13 C3M 41 C3M H18 H18 H 0 1 N N N 4.863 18.547 45.784 3.903 1.768 -1.628 H18 C3M 42 C3M H19 H19 H 0 1 N N N 3.205 19.866 44.561 5.182 -0.203 -2.271 H19 C3M 43 C3M H21 H21 H 0 1 N N N 0.885 20.718 44.404 5.807 -2.566 -1.849 H21 C3M 44 C3M H22 H22 H 0 1 N N N -1.351 20.899 45.378 5.583 -4.580 -0.497 H22 C3M 45 C3M H23 H23 H 0 1 N N N -1.907 19.810 47.509 4.104 -4.621 1.465 H23 C3M 46 C3M H24 H24 H 0 1 N N N -0.229 18.524 48.723 2.825 -2.650 2.106 H24 C3M 47 C3M H26 H26 H 0 1 N N N 2.092 17.634 48.911 2.207 -0.284 1.692 H26 C3M 48 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C3M N1 C2 SING N N 1 C3M N1 H1N1 SING N N 2 C3M N1 H1N2 SING N N 3 C3M C2 C3 SING N N 4 C3M C2 C10 SING N N 5 C3M C2 H2 SING N N 6 C3M C3 C4 SING N N 7 C3M C3 H3C1 SING N N 8 C3M C3 H3C2 SING N N 9 C3M C4 C5 DOUB Y N 10 C3M C4 C9 SING Y N 11 C3M C5 C6 SING Y N 12 C3M C5 H5 SING N N 13 C3M C6 C7 DOUB Y N 14 C3M C6 H6 SING N N 15 C3M C7 C8 SING Y N 16 C3M C7 H7 SING N N 17 C3M C8 C9 DOUB Y N 18 C3M C8 H8 SING N N 19 C3M C9 H9 SING N N 20 C3M C10 O11 SING N N 21 C3M C10 C12 SING N N 22 C3M C10 H10 SING N N 23 C3M O11 H11 SING N N 24 C3M C12 N13 SING N N 25 C3M C12 H121 SING N N 26 C3M C12 H122 SING N N 27 C3M N13 S14 SING N N 28 C3M N13 H13 SING N N 29 C3M S14 O15 DOUB N N 30 C3M S14 O16 DOUB N N 31 C3M S14 C17 SING N N 32 C3M C17 C18 DOUB Y N 33 C3M C17 C26 SING Y N 34 C3M C18 C19 SING Y N 35 C3M C18 H18 SING N N 36 C3M C19 C20 DOUB Y N 37 C3M C19 H19 SING N N 38 C3M C20 C21 SING Y N 39 C3M C20 C25 SING Y N 40 C3M C21 C22 DOUB Y N 41 C3M C21 H21 SING N N 42 C3M C22 C23 SING Y N 43 C3M C22 H22 SING N N 44 C3M C23 C24 DOUB Y N 45 C3M C23 H23 SING N N 46 C3M C24 C25 SING Y N 47 C3M C24 H24 SING N N 48 C3M C25 C26 DOUB Y N 49 C3M C26 H26 SING N N 50 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor C3M SMILES ACDLabs 10.04 "O=S(=O)(c2cc1ccccc1cc2)NCC(O)C(N)Cc3ccccc3" C3M SMILES_CANONICAL CACTVS 3.341 "N[C@@H](Cc1ccccc1)[C@H](O)CN[S](=O)(=O)c2ccc3ccccc3c2" C3M SMILES CACTVS 3.341 "N[CH](Cc1ccccc1)[CH](O)CN[S](=O)(=O)c2ccc3ccccc3c2" C3M SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)C[C@@H]([C@@H](CNS(=O)(=O)c2ccc3ccccc3c2)O)N" C3M SMILES "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)CC(C(CNS(=O)(=O)c2ccc3ccccc3c2)O)N" C3M InChI InChI 1.03 "InChI=1S/C20H22N2O3S/c21-19(12-15-6-2-1-3-7-15)20(23)14-22-26(24,25)18-11-10-16-8-4-5-9-17(16)13-18/h1-11,13,19-20,22-23H,12,14,21H2/t19-,20+/m0/s1" C3M InChIKey InChI 1.03 QSSWSEQPKCCATQ-VQTJNVASSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier C3M "SYSTEMATIC NAME" ACDLabs 10.04 "N-[(2R,3S)-3-amino-2-hydroxy-4-phenylbutyl]naphthalene-2-sulfonamide" C3M "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "N-[(2R,3S)-3-amino-2-hydroxy-4-phenyl-butyl]naphthalene-2-sulfonamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site C3M "Create component" 2005-12-08 EBI C3M "Modify descriptor" 2011-06-04 RCSB C3M "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id C3M _pdbx_chem_comp_synonyms.name "INHIBITOR OF THROMBIN" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##