data_C4I # _chem_comp.id C4I _chem_comp.name "(3~{S})-1-[[4-(naphthalen-1-ylcarbamoyl)phenyl]methyl]-~{N}-[3-(1,2,3,4-tetrahydroacridin-9-ylamino)propyl]piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C40 H43 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-12-14 _chem_comp.pdbx_modified_date 2022-12-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 625.802 _chem_comp.one_letter_code ? _chem_comp.three_letter_code C4I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7QHE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal C4I N1 N1 N 0 1 Y N N 22.871 38.459 42.453 -11.526 0.559 -0.141 N1 C4I 1 C4I N3 N2 N 0 1 N N N 19.739 45.200 38.198 -2.934 -0.380 -0.003 N3 C4I 2 C4I C4 C1 C 0 1 Y N N 24.019 40.156 43.802 -11.751 -1.703 0.590 C4 C4I 3 C4I C5 C2 C 0 1 Y N N 23.324 39.773 42.581 -10.996 -0.530 0.418 C5 C4I 4 C4I C6 C3 C 0 1 Y N N 23.134 40.716 41.545 -9.648 -0.512 0.849 C6 C4I 5 C4I C7 C4 C 0 1 Y N N 22.439 40.299 40.340 -8.897 0.672 0.672 C7 C4I 6 C4I C8 C5 C 0 1 Y N N 22.229 38.101 41.339 -10.840 1.676 -0.317 C8 C4I 7 C4I C10 C6 C 0 1 N N N 21.420 38.394 38.972 -8.700 3.020 -0.093 C10 C4I 8 C4I C13 C7 C 0 1 N N N 20.642 37.057 39.115 -9.356 3.954 -1.107 C13 C4I 9 C4I C15 C8 C 0 1 N N N 20.936 42.999 38.178 -5.242 0.191 0.571 C15 C4I 10 C4I C17 C9 C 0 1 N N N 19.706 46.572 38.248 -1.933 -0.827 -0.788 C17 C4I 11 C4I C20 C10 C 0 1 N N N 17.387 46.483 37.357 0.415 -1.398 -1.347 C20 C4I 12 C4I C21 C11 C 0 1 N N N 19.028 48.201 36.315 -0.446 -1.752 0.970 C21 C4I 13 C4I C22 C12 C 0 1 N N N 19.238 47.269 35.098 1.004 -1.819 1.458 C22 C4I 14 C4I C24 C13 C 0 1 Y N N 16.053 44.305 36.689 4.146 -1.622 -1.397 C24 C4I 15 C4I C26 C14 C 0 1 Y N N 16.842 42.458 38.105 6.101 -2.465 -0.300 C26 C4I 16 C4I C28 C15 C 0 1 Y N N 14.873 44.313 37.443 4.775 -0.407 -1.607 C28 C4I 17 C4I C1 C16 C 0 1 Y N N 23.631 42.038 41.754 -9.090 -1.655 1.436 C1 C4I 18 C4I C11 C17 C 0 1 N N N 21.494 36.805 41.452 -11.564 2.828 -0.968 C11 C4I 19 C4I C12 C18 C 0 1 N N N 21.324 36.131 40.098 -10.826 4.140 -0.712 C12 C4I 20 C4I C14 C19 C 0 1 N N N 22.160 42.165 38.684 -6.677 0.215 0.040 C14 C4I 21 C4I C16 C20 C 0 1 N N N 20.783 44.384 38.810 -4.308 -0.357 -0.511 C16 C4I 22 C4I C18 C21 C 0 1 N N S 18.602 47.402 37.610 -0.520 -0.850 -0.266 C18 C4I 23 C4I C19 C22 C 0 1 N N N 18.531 45.950 35.310 1.894 -2.338 0.327 C19 C4I 24 C4I C2 C23 C 0 1 Y N N 24.279 42.392 42.920 -9.852 -2.775 1.587 C2 C4I 25 C4I C23 C24 C 0 1 N N N 16.261 45.238 35.526 2.736 -1.830 -1.885 C23 C4I 26 C4I C25 C25 C 0 1 Y N N 15.647 42.463 38.876 6.742 -1.243 -0.510 C25 C4I 27 C4I C27 C26 C 0 1 Y N N 17.031 43.351 37.033 4.807 -2.647 -0.745 C27 C4I 28 C4I C29 C27 C 0 1 Y N N 14.681 43.417 38.506 6.069 -0.212 -1.168 C29 C4I 29 C4I C3 C28 C 0 1 Y N N 24.493 41.427 43.963 -11.179 -2.797 1.164 C3 C4I 30 C4I C30 C29 C 0 1 N N N 15.446 41.523 40.039 8.127 -1.040 -0.036 C30 C4I 31 C4I C31 C30 C 0 1 Y N N 14.140 40.674 42.120 10.087 0.295 0.102 C31 C4I 32 C4I C32 C31 C 0 1 Y N N 13.711 38.852 44.289 12.792 0.566 0.774 C32 C4I 33 C4I C33 C32 C 0 1 Y N N 13.953 38.386 43.013 12.264 -0.657 0.491 C33 C4I 34 C4I C34 C33 C 0 1 Y N N 14.155 39.295 41.940 10.921 -0.801 0.156 C34 C4I 35 C4I C35 C34 C 0 1 Y N N 13.895 41.178 43.515 10.606 1.576 0.392 C35 C4I 36 C4I C36 C35 C 0 1 Y N N 13.688 40.266 44.575 11.975 1.709 0.732 C36 C4I 37 C4I C37 C36 C 0 1 Y N N 13.454 40.745 45.922 12.491 2.984 1.019 C37 C4I 38 C4I C38 C37 C 0 1 Y N N 13.856 42.570 43.891 9.792 2.718 0.349 C38 C4I 39 C4I C39 C38 C 0 1 Y N N 13.617 43.021 45.181 10.326 3.938 0.634 C39 C4I 40 C4I C40 C39 C 0 1 Y N N 13.417 42.096 46.222 11.672 4.070 0.968 C40 C4I 41 C4I C9 C40 C 0 1 Y N N 21.951 38.986 40.266 -9.518 1.768 0.082 C9 C4I 42 C4I N2 N3 N 0 1 N N N 21.718 41.280 39.703 -7.574 0.740 1.079 N2 C4I 43 C4I N4 N4 N 0 1 N N N 17.224 46.289 35.874 1.790 -1.441 -0.831 N4 C4I 44 C4I N5 N5 N 0 1 N N N 14.379 41.528 40.962 8.743 0.141 -0.240 N5 C4I 45 C4I O1 O1 O 0 1 N N N 20.625 47.145 38.860 -2.170 -1.209 -1.914 O1 C4I 46 C4I O2 O2 O 0 1 N N N 16.342 40.678 40.222 8.711 -1.939 0.537 O2 C4I 47 C4I H1 H1 H 0 1 N N N 19.002 44.731 37.712 -2.744 -0.074 0.897 H1 C4I 48 C4I H2 H2 H 0 1 N N N 24.161 39.428 44.587 -12.781 -1.736 0.269 H2 C4I 49 C4I H3 H3 H 0 1 N N N 22.276 38.218 38.304 -7.703 2.753 -0.442 H3 C4I 50 C4I H4 H4 H 0 1 N N N 20.744 39.132 38.515 -8.618 3.532 0.866 H4 C4I 51 C4I H5 H5 H 0 1 N N N 19.623 37.271 39.471 -8.849 4.919 -1.101 H5 C4I 52 C4I H6 H6 H 0 1 N N N 20.592 36.564 38.133 -9.297 3.514 -2.103 H6 C4I 53 C4I H7 H7 H 0 1 N N N 21.041 43.131 37.091 -4.936 1.202 0.837 H7 C4I 54 C4I H8 H8 H 0 1 N N N 20.022 42.425 38.391 -5.191 -0.449 1.452 H8 C4I 55 C4I H9 H9 H 0 1 N N N 16.480 46.948 37.771 0.100 -2.403 -1.624 H9 C4I 56 C4I H10 H10 H 0 1 N N N 17.553 45.509 37.841 0.376 -0.750 -2.222 H10 C4I 57 C4I H11 H11 H 0 1 N N N 19.968 48.733 36.520 -0.789 -2.754 0.711 H11 C4I 58 C4I H12 H12 H 0 1 N N N 18.240 48.929 36.072 -1.078 -1.343 1.758 H12 C4I 59 C4I H13 H13 H 0 1 N N N 20.314 47.085 34.965 1.334 -0.823 1.754 H13 C4I 60 C4I H14 H14 H 0 1 N N N 18.835 47.755 34.197 1.070 -2.493 2.312 H14 C4I 61 C4I H15 H15 H 0 1 N N N 17.623 41.753 38.348 6.616 -3.266 0.208 H15 C4I 62 C4I H16 H16 H 0 1 N N N 14.095 45.023 37.202 4.253 0.389 -2.117 H16 C4I 63 C4I H17 H17 H 0 1 N N N 23.497 42.780 40.980 -8.062 -1.649 1.767 H17 C4I 64 C4I H18 H18 H 0 1 N N N 20.500 36.996 41.882 -11.625 2.654 -2.042 H18 C4I 65 C4I H19 H19 H 0 1 N N N 22.058 36.133 42.116 -12.571 2.898 -0.557 H19 C4I 66 C4I H20 H20 H 0 1 N N N 20.714 35.224 40.221 -10.891 4.397 0.345 H20 C4I 67 C4I H21 H21 H 0 1 N N N 22.314 35.856 39.706 -11.269 4.933 -1.313 H21 C4I 68 C4I H22 H22 H 0 1 N N N 22.584 41.587 37.850 -6.728 0.854 -0.841 H22 C4I 69 C4I H23 H23 H 0 1 N N N 22.927 42.842 39.089 -6.983 -0.797 -0.226 H23 C4I 70 C4I H24 H24 H 0 1 N N N 20.542 44.254 39.875 -4.359 0.283 -1.392 H24 C4I 71 C4I H25 H25 H 0 1 N N N 21.741 44.917 38.713 -4.614 -1.368 -0.777 H25 C4I 72 C4I H26 H26 H 0 1 N N N 18.288 48.151 38.352 -0.213 0.161 0.003 H26 C4I 73 C4I H27 H27 H 0 1 N N N 18.411 45.421 34.353 2.930 -2.373 0.667 H27 C4I 74 C4I H28 H28 H 0 1 N N N 19.099 45.318 36.009 1.572 -3.339 0.041 H28 C4I 75 C4I H29 H29 H 0 1 N N N 24.629 43.405 43.050 -9.422 -3.657 2.039 H29 C4I 76 C4I H30 H30 H 0 1 N N N 15.300 45.702 35.258 2.564 -1.219 -2.771 H30 C4I 77 C4I H31 H31 H 0 1 N N N 16.644 44.666 34.668 2.589 -2.881 -2.135 H31 C4I 78 C4I H32 H32 H 0 1 N N N 17.946 43.304 36.462 4.310 -3.592 -0.583 H32 C4I 79 C4I H33 H33 H 0 1 N N N 13.756 43.461 39.062 6.559 0.736 -1.334 H33 C4I 80 C4I H34 H34 H 0 1 N N N 25.022 41.703 44.863 -11.763 -3.696 1.294 H34 C4I 81 C4I H35 H35 H 0 1 N N N 13.536 38.146 45.087 13.836 0.657 1.032 H35 C4I 82 C4I H36 H36 H 0 1 N N N 13.989 37.322 42.829 12.899 -1.530 0.526 H36 C4I 83 C4I H37 H37 H 0 1 N N N 14.326 38.901 40.949 10.528 -1.782 -0.065 H37 C4I 84 C4I H38 H38 H 0 1 N N N 13.304 40.027 46.715 13.533 3.101 1.279 H38 C4I 85 C4I H39 H39 H 0 1 N N N 14.023 43.307 43.120 8.747 2.630 0.091 H39 C4I 86 C4I H40 H40 H 0 1 N N N 13.585 44.081 45.386 9.698 4.815 0.600 H40 C4I 87 C4I H41 H41 H 0 1 N N N 13.239 42.432 47.233 12.072 5.049 1.189 H41 C4I 88 C4I H42 H42 H 0 1 N N N 21.400 41.879 40.438 -7.438 0.255 1.953 H42 C4I 89 C4I H44 H44 H 0 1 N N N 13.680 42.223 40.797 8.253 0.884 -0.625 H44 C4I 90 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C4I C22 C19 SING N N 1 C4I C22 C21 SING N N 2 C4I C19 N4 SING N N 3 C4I C23 N4 SING N N 4 C4I C23 C24 SING N N 5 C4I N4 C20 SING N N 6 C4I C21 C18 SING N N 7 C4I C24 C27 DOUB Y N 8 C4I C24 C28 SING Y N 9 C4I C27 C26 SING Y N 10 C4I C20 C18 SING N N 11 C4I C28 C29 DOUB Y N 12 C4I C18 C17 SING N N 13 C4I C26 C25 DOUB Y N 14 C4I C15 C14 SING N N 15 C4I C15 C16 SING N N 16 C4I N3 C17 SING N N 17 C4I N3 C16 SING N N 18 C4I C17 O1 DOUB N N 19 C4I C29 C25 SING Y N 20 C4I C14 N2 SING N N 21 C4I C25 C30 SING N N 22 C4I C10 C13 SING N N 23 C4I C10 C9 SING N N 24 C4I C13 C12 SING N N 25 C4I N2 C7 SING N N 26 C4I C30 O2 DOUB N N 27 C4I C30 N5 SING N N 28 C4I C12 C11 SING N N 29 C4I C9 C7 DOUB Y N 30 C4I C9 C8 SING Y N 31 C4I C7 C6 SING Y N 32 C4I N5 C31 SING N N 33 C4I C8 C11 SING N N 34 C4I C8 N1 DOUB Y N 35 C4I C6 C1 DOUB Y N 36 C4I C6 C5 SING Y N 37 C4I C1 C2 SING Y N 38 C4I C34 C31 DOUB Y N 39 C4I C34 C33 SING Y N 40 C4I C31 C35 SING Y N 41 C4I N1 C5 SING Y N 42 C4I C5 C4 DOUB Y N 43 C4I C2 C3 DOUB Y N 44 C4I C33 C32 DOUB Y N 45 C4I C35 C38 DOUB Y N 46 C4I C35 C36 SING Y N 47 C4I C4 C3 SING Y N 48 C4I C38 C39 SING Y N 49 C4I C32 C36 SING Y N 50 C4I C36 C37 DOUB Y N 51 C4I C39 C40 DOUB Y N 52 C4I C37 C40 SING Y N 53 C4I N3 H1 SING N N 54 C4I C4 H2 SING N N 55 C4I C10 H3 SING N N 56 C4I C10 H4 SING N N 57 C4I C13 H5 SING N N 58 C4I C13 H6 SING N N 59 C4I C15 H7 SING N N 60 C4I C15 H8 SING N N 61 C4I C20 H9 SING N N 62 C4I C20 H10 SING N N 63 C4I C21 H11 SING N N 64 C4I C21 H12 SING N N 65 C4I C22 H13 SING N N 66 C4I C22 H14 SING N N 67 C4I C26 H15 SING N N 68 C4I C28 H16 SING N N 69 C4I C1 H17 SING N N 70 C4I C11 H18 SING N N 71 C4I C11 H19 SING N N 72 C4I C12 H20 SING N N 73 C4I C12 H21 SING N N 74 C4I C14 H22 SING N N 75 C4I C14 H23 SING N N 76 C4I C16 H24 SING N N 77 C4I C16 H25 SING N N 78 C4I C18 H26 SING N N 79 C4I C19 H27 SING N N 80 C4I C19 H28 SING N N 81 C4I C2 H29 SING N N 82 C4I C23 H30 SING N N 83 C4I C23 H31 SING N N 84 C4I C27 H32 SING N N 85 C4I C29 H33 SING N N 86 C4I C3 H34 SING N N 87 C4I C32 H35 SING N N 88 C4I C33 H36 SING N N 89 C4I C34 H37 SING N N 90 C4I C37 H38 SING N N 91 C4I C38 H39 SING N N 92 C4I C39 H40 SING N N 93 C4I C40 H41 SING N N 94 C4I N2 H42 SING N N 95 C4I N5 H44 SING N N 96 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor C4I InChI InChI 1.06 "InChI=1S/C40H43N5O2/c46-39(42-24-9-23-41-38-33-14-3-5-16-36(33)43-37-17-6-4-15-34(37)38)31-12-8-25-45(27-31)26-28-19-21-30(22-20-28)40(47)44-35-18-7-11-29-10-1-2-13-32(29)35/h1-3,5,7,10-11,13-14,16,18-22,31H,4,6,8-9,12,15,17,23-27H2,(H,41,43)(H,42,46)(H,44,47)/t31-/m0/s1" C4I InChIKey InChI 1.06 YUEGXFMZPDSPEB-HKBQPEDESA-N C4I SMILES_CANONICAL CACTVS 3.385 "O=C(NCCCNc1c2CCCCc2nc3ccccc13)[C@H]4CCCN(C4)Cc5ccc(cc5)C(=O)Nc6cccc7ccccc67" C4I SMILES CACTVS 3.385 "O=C(NCCCNc1c2CCCCc2nc3ccccc13)[CH]4CCCN(C4)Cc5ccc(cc5)C(=O)Nc6cccc7ccccc67" C4I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)cccc2NC(=O)c3ccc(cc3)CN4CCC[C@@H](C4)C(=O)NCCCNc5c6ccccc6nc7c5CCCC7" C4I SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)cccc2NC(=O)c3ccc(cc3)CN4CCCC(C4)C(=O)NCCCNc5c6ccccc6nc7c5CCCC7" # _pdbx_chem_comp_identifier.comp_id C4I _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S})-1-[[4-(naphthalen-1-ylcarbamoyl)phenyl]methyl]-~{N}-[3-(1,2,3,4-tetrahydroacridin-9-ylamino)propyl]piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site C4I "Create component" 2021-12-14 PDBE C4I "Modify descriptor" 2022-08-22 RCSB C4I "Initial release" 2022-12-21 RCSB #