data_C4X # _chem_comp.id C4X _chem_comp.name 3,4-EPOXYBUTYL-BETA-D-XYLOSIDE _chem_comp.type D-SACCHARIDE _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H16 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 220.220 _chem_comp.one_letter_code ? _chem_comp.three_letter_code C4X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1REE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal C4X C1 C1 C 0 1 N N R 81.727 22.727 10.669 -0.216 0.222 0.460 C1 C4X 1 C4X C2 C2 C 0 1 N N R 81.511 23.929 11.629 -1.062 -0.263 1.638 C2 C4X 2 C4X C3 C3 C 0 1 N N S 82.839 24.205 12.359 -0.411 0.196 2.947 C3 C4X 3 C4X C4 C4 C 0 1 N N R 83.290 22.965 13.153 1.050 -0.264 2.956 C4 C4X 4 C4X C5 C5 C 0 1 N N N 83.348 21.754 12.193 1.737 0.222 1.678 C5 C4X 5 C4X O1 O1 O 0 1 N N N 80.550 22.369 9.904 -0.834 -0.177 -0.764 O1 C4X 6 C4X O2 O2 O 0 1 N N N 81.157 25.111 10.936 -2.379 0.282 1.539 O2 C4X 7 C4X O3 O3 O 0 1 N N N 82.705 25.289 13.235 -1.107 -0.374 4.056 O3 C4X 8 C4X O4 O4 O 0 1 N N N 84.565 23.200 13.751 1.717 0.282 4.095 O4 C4X 9 C4X O5 O5 O 0 1 N N N 82.114 21.609 11.462 1.091 -0.341 0.538 O5 C4X 10 C4X "C1'" "C1'" C 0 1 N N N 80.806 22.016 8.510 -0.006 0.308 -1.823 "C1'" C4X 11 C4X "C2'" "C2'" C 0 1 N N N 79.665 21.226 7.835 -0.615 -0.088 -3.169 "C2'" C4X 12 C4X "C3'" "C3'" C 0 1 N N R 78.447 21.995 7.288 0.270 0.431 -4.303 "C3'" C4X 13 C4X "C4'" "C4'" C 0 1 N N N 78.759 22.998 6.145 -0.147 0.111 -5.739 "C4'" C4X 14 C4X "O'" "O'" O 0 1 N N N 77.874 22.690 8.366 0.962 -0.529 -5.103 "O'" C4X 15 C4X H1 H1 H 0 1 N N N 82.505 23.022 9.928 -0.143 1.310 0.490 H1 C4X 16 C4X H2 H2 H 0 1 N N N 80.683 23.663 12.327 -1.117 -1.352 1.623 H2 C4X 17 C4X H3 H3 H 0 1 N N N 83.607 24.447 11.588 -0.449 1.284 3.012 H3 C4X 18 C4X H4 H4 H 0 1 N N N 82.563 22.752 13.971 1.089 -1.353 2.999 H4 C4X 19 C4X H51 1H5 H 0 1 N N N 84.225 21.815 11.507 1.678 1.309 1.627 H51 C4X 20 C4X H52 2H5 H 0 1 N N N 83.617 20.816 12.732 2.783 -0.083 1.690 H52 C4X 21 C4X HO2 HO2 H 0 1 N N N 81.024 25.846 11.523 -2.748 -0.028 0.701 HO2 C4X 22 C4X HO3 HO3 H 0 1 N N N 83.524 25.459 13.685 -0.665 -0.059 4.857 HO3 C4X 23 C4X HO4 HO4 H 0 1 N N N 84.843 22.435 14.240 2.632 -0.030 4.060 HO4 C4X 24 C4X "H1'1" "1H1'" H 0 0 N N N 81.053 22.927 7.916 0.061 1.394 -1.761 "H1'1" C4X 25 C4X "H1'2" "2H1'" H 0 0 N N N 81.769 21.462 8.419 0.989 -0.123 -1.733 "H1'2" C4X 26 C4X "H2'1" "1H2'" H 0 0 N N N 80.094 20.603 7.015 -0.683 -1.175 -3.231 "H2'1" C4X 27 C4X "H2'2" "2H2'" H 0 0 N N N 79.306 20.439 8.539 -1.611 0.343 -3.259 "H2'2" C4X 28 C4X "H3'" "H3'" H 0 1 N N N 77.761 21.241 6.834 0.762 1.386 -4.118 "H3'" C4X 29 C4X "H4'1" "1H4'" H 0 0 N N N 79.447 23.480 5.412 -1.056 -0.472 -5.885 "H4'1" C4X 30 C4X "H4'2" "2H4'" H 0 0 N N N 78.683 23.350 5.089 0.067 0.853 -6.508 "H4'2" C4X 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C4X C1 C2 SING N N 1 C4X C1 O1 SING N N 2 C4X C1 O5 SING N N 3 C4X C1 H1 SING N N 4 C4X C2 C3 SING N N 5 C4X C2 O2 SING N N 6 C4X C2 H2 SING N N 7 C4X C3 C4 SING N N 8 C4X C3 O3 SING N N 9 C4X C3 H3 SING N N 10 C4X C4 C5 SING N N 11 C4X C4 O4 SING N N 12 C4X C4 H4 SING N N 13 C4X C5 O5 SING N N 14 C4X C5 H51 SING N N 15 C4X C5 H52 SING N N 16 C4X O1 "C1'" SING N N 17 C4X O2 HO2 SING N N 18 C4X O3 HO3 SING N N 19 C4X O4 HO4 SING N N 20 C4X "C1'" "C2'" SING N N 21 C4X "C1'" "H1'1" SING N N 22 C4X "C1'" "H1'2" SING N N 23 C4X "C2'" "C3'" SING N N 24 C4X "C2'" "H2'1" SING N N 25 C4X "C2'" "H2'2" SING N N 26 C4X "C3'" "C4'" SING N N 27 C4X "C3'" "O'" SING N N 28 C4X "C3'" "H3'" SING N N 29 C4X "C4'" "O'" SING N N 30 C4X "C4'" "H4'1" SING N N 31 C4X "C4'" "H4'2" SING N N 32 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor C4X SMILES ACDLabs 10.04 "O(CCC1OC1)C2OCC(O)C(O)C2O" C4X SMILES_CANONICAL CACTVS 3.341 "O[C@@H]1CO[C@@H](OCC[C@@H]2CO2)[C@H](O)[C@H]1O" C4X SMILES CACTVS 3.341 "O[CH]1CO[CH](OCC[CH]2CO2)[CH](O)[CH]1O" C4X SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C1[C@H](O1)CCO[C@H]2[C@@H]([C@H]([C@@H](CO2)O)O)O" C4X SMILES "OpenEye OEToolkits" 1.5.0 "C1C(O1)CCOC2C(C(C(CO2)O)O)O" C4X InChI InChI 1.03 "InChI=1S/C9H16O6/c10-6-4-15-9(8(12)7(6)11)13-2-1-5-3-14-5/h5-12H,1-4H2/t5-,6-,7+,8-,9-/m1/s1" C4X InChIKey InChI 1.03 QVLDZEPOGBSMRP-SYHAXYEDSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier C4X "SYSTEMATIC NAME" ACDLabs 10.04 "2-[(2R)-oxiran-2-yl]ethyl beta-D-xylopyranoside" C4X "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3R,4S,5R)-2-[2-[(2R)-oxiran-2-yl]ethoxy]oxane-3,4,5-triol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site C4X "Create component" 1999-07-08 PDBJ C4X "Modify descriptor" 2011-06-04 RCSB #