data_C4Z # _chem_comp.id C4Z _chem_comp.name "(2~{R})-3-cyclohexyl-2-[(2~{R},3~{S},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-6-[(1~{R},2~{R})-2-[(2~{S},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]oxycyclohexyl]oxy-3,5-bis(oxidanyl)oxan-4-yl]oxy-propanoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H46 O13" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-11-13 _chem_comp.pdbx_modified_date 2018-11-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 578.646 _chem_comp.one_letter_code ? _chem_comp.three_letter_code C4Z _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6EYI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal C4Z C4 C1 C 0 1 N N S -11.164 -34.421 45.099 -1.760 0.491 1.610 C4 C4Z 1 C4Z C5 C2 C 0 1 N N R -12.081 -33.648 46.075 -0.728 1.597 1.843 C5 C4Z 2 C4Z C6 C3 C 0 1 N N N -13.069 -32.749 45.317 -0.382 1.667 3.332 C6 C4Z 3 C4Z C3 C4 C 0 1 N N S -10.090 -35.187 45.895 -2.056 0.387 0.111 C3 C4Z 4 C4Z CAD C5 C 0 1 N N N -6.879 -38.770 44.192 -6.262 0.860 -0.206 CAD C4Z 5 C4Z CAC C6 C 0 1 N N N -7.277 -40.236 43.953 -6.990 1.506 0.974 CAC C4Z 6 C4Z CAB C7 C 0 1 N N N -6.681 -41.124 45.084 -8.250 0.701 1.299 CAB C4Z 7 C4Z CAG C8 C 0 1 N N N -7.136 -40.651 46.495 -7.860 -0.733 1.663 CAG C4Z 8 C4Z CAF C9 C 0 1 N N N -6.853 -39.139 46.715 -7.132 -1.379 0.483 CAF C4Z 9 C4Z CAE C10 C 0 1 N N N -7.449 -38.290 45.565 -5.872 -0.574 0.158 CAE C4Z 10 C4Z CAH C11 C 0 1 N N N -7.125 -36.809 45.825 -5.143 -1.220 -1.022 CAH C4Z 11 C4Z CAI C12 C 0 1 N N R -7.852 -35.855 44.848 -3.813 -0.501 -1.256 CAI C4Z 12 C4Z CBM C13 C 0 1 N N N -7.179 -34.443 44.746 -3.147 -1.065 -2.485 CBM C4Z 13 C4Z OBN O1 O 0 1 N N N -7.910 -33.423 44.716 -3.718 -0.909 -3.689 OBN C4Z 14 C4Z OBO O2 O 0 1 N N N -5.925 -34.413 44.645 -2.099 -1.657 -2.386 OBO C4Z 15 C4Z O3 O3 O 0 1 N N N -9.304 -35.946 44.916 -2.963 -0.692 -0.123 O3 C4Z 16 C4Z C2 C14 C 0 1 N N R -10.704 -36.103 47.025 -0.746 0.128 -0.640 C2 C4Z 17 C4Z O2 O4 O 0 1 N N N -9.683 -36.467 47.993 -0.999 0.101 -2.046 O2 C4Z 18 C4Z O4 O5 O 0 1 N N N -11.913 -35.325 44.242 -1.240 -0.754 2.082 O4 C4Z 19 C4Z O6 O6 O 0 1 N N N -12.365 -31.629 44.745 0.491 2.774 3.567 O6 C4Z 20 C4Z O5 O7 O 0 1 N N N -12.746 -34.569 46.960 0.454 1.311 1.093 O5 C4Z 21 C4Z C1 C15 C 0 1 N N R -11.858 -35.415 47.810 0.247 1.248 -0.320 C1 C4Z 22 C4Z O1 O8 O 0 1 N N N -12.663 -36.450 48.432 1.490 0.984 -0.973 O1 C4Z 23 C4Z CAR C16 C 0 1 N N R -13.161 -36.016 49.727 2.454 2.029 -0.831 CAR C4Z 24 C4Z CAW C17 C 0 1 N N N -12.385 -36.770 50.868 2.300 3.024 -1.982 CAW C4Z 25 C4Z CAV C18 C 0 1 N N N -12.980 -36.442 52.256 3.333 4.143 -1.831 CAV C4Z 26 C4Z CAU C19 C 0 1 N N N -14.500 -36.756 52.302 4.741 3.545 -1.859 CAU C4Z 27 C4Z CAT C20 C 0 1 N N N -15.244 -35.946 51.220 4.895 2.549 -0.708 CAT C4Z 28 C4Z CAS C21 C 0 1 N N R -14.689 -36.329 49.824 3.862 1.431 -0.859 CAS C4Z 29 C4Z OAX O9 O 0 1 N N N -15.415 -35.661 48.793 4.006 0.501 0.216 OAX C4Z 30 C4Z CAY C22 C 0 1 N N S -16.422 -36.486 48.100 4.916 -0.567 -0.057 CAY C4Z 31 C4Z OBA O10 O 0 1 N N N -15.846 -37.452 47.142 4.400 -1.373 -1.118 OBA C4Z 32 C4Z CBB C23 C 0 1 N N S -15.084 -36.859 46.034 3.118 -1.943 -0.847 CBB C4Z 33 C4Z CBH C24 C 0 1 N N N -14.534 -37.984 45.144 2.656 -2.758 -2.057 CBH C4Z 34 C4Z CBC C25 C 0 1 N N S -15.959 -35.829 45.237 3.216 -2.858 0.377 CBC C4Z 35 C4Z OBG O11 O 0 1 N N N -16.986 -36.485 44.461 4.116 -3.932 0.099 OBG C4Z 36 C4Z CBD C26 C 0 1 N N R -16.643 -34.827 46.186 3.736 -2.049 1.569 CBD C4Z 37 C4Z OBF O12 O 0 1 N N N -17.564 -33.993 45.450 3.901 -2.911 2.697 OBF C4Z 38 C4Z CAZ C27 C 0 1 N N S -17.405 -35.569 47.331 5.087 -1.426 1.199 CAZ C4Z 39 C4Z OBE O13 O 0 1 N N N -18.003 -34.621 48.216 5.547 -0.610 2.278 OBE C4Z 40 C4Z H1 H1 H 0 1 N N N -10.649 -33.681 44.469 -2.678 0.730 2.147 H1 C4Z 41 C4Z H2 H2 H 0 1 N N N -11.435 -32.991 46.676 -1.141 2.553 1.521 H2 C4Z 42 C4Z H3 H3 H 0 1 N N N -13.837 -32.381 46.013 -1.296 1.796 3.912 H3 C4Z 43 C4Z H4 H4 H 0 1 N N N -13.549 -33.328 44.514 0.112 0.744 3.634 H4 C4Z 44 C4Z H5 H5 H 0 1 N N N -9.437 -34.449 46.384 -2.499 1.319 -0.239 H5 C4Z 45 C4Z H6 H6 H 0 1 N N N -5.782 -38.685 44.201 -6.919 0.848 -1.076 H6 C4Z 46 C4Z H7 H7 H 0 1 N N N -7.289 -38.143 43.386 -5.364 1.433 -0.437 H7 C4Z 47 C4Z H8 H8 H 0 1 N N N -8.373 -40.324 43.957 -6.333 1.518 1.844 H8 C4Z 48 C4Z H9 H9 H 0 1 N N N -6.886 -40.569 42.980 -7.268 2.527 0.715 H9 C4Z 49 C4Z H10 H10 H 0 1 N N N -7.013 -42.162 44.933 -8.769 1.161 2.139 H10 C4Z 50 C4Z H11 H11 H 0 1 N N N -5.583 -41.078 45.031 -8.907 0.689 0.429 H11 C4Z 51 C4Z H12 H12 H 0 1 N N N -8.216 -40.830 46.600 -7.203 -0.720 2.533 H12 C4Z 52 C4Z H13 H13 H 0 1 N N N -6.593 -41.230 47.257 -8.757 -1.306 1.894 H13 C4Z 53 C4Z H14 H14 H 0 1 N N N -5.765 -38.979 46.754 -6.854 -2.400 0.742 H14 C4Z 54 C4Z H15 H15 H 0 1 N N N -7.305 -38.823 47.667 -7.789 -1.391 -0.387 H15 C4Z 55 C4Z H16 H16 H 0 1 N N N -8.541 -38.420 45.557 -5.214 -0.562 1.028 H16 C4Z 56 C4Z H17 H17 H 0 1 N N N -6.040 -36.663 45.717 -4.955 -2.271 -0.802 H17 C4Z 57 C4Z H18 H18 H 0 1 N N N -7.428 -36.558 46.852 -5.761 -1.142 -1.917 H18 C4Z 58 C4Z H19 H19 H 0 1 N N N -7.618 -36.297 43.868 -3.996 0.564 -1.398 H19 C4Z 59 C4Z H20 H20 H 0 1 N N N -7.370 -32.649 44.607 -3.254 -1.288 -4.448 H20 C4Z 60 C4Z H21 H21 H 0 1 N N N -11.103 -37.011 46.549 -0.329 -0.829 -0.325 H21 C4Z 61 C4Z H22 H22 H 0 1 N N N -10.066 -37.017 48.666 -0.212 -0.059 -2.584 H22 C4Z 62 C4Z H23 H23 H 0 1 N N N -12.569 -34.835 43.760 -1.030 -0.760 3.026 H23 C4Z 63 C4Z H24 H24 H 0 1 N N N -12.978 -31.075 44.277 0.752 2.879 4.492 H24 C4Z 64 C4Z H25 H25 H 0 1 N N N -11.409 -34.784 48.591 -0.153 2.199 -0.671 H25 C4Z 65 C4Z H26 H26 H 0 1 N N N -13.010 -34.934 49.852 2.297 2.543 0.117 H26 C4Z 66 C4Z H27 H27 H 0 1 N N N -12.455 -37.854 50.694 2.458 2.510 -2.931 H27 C4Z 67 C4Z H28 H28 H 0 1 N N N -11.329 -36.463 50.848 1.297 3.451 -1.962 H28 C4Z 68 C4Z H29 H29 H 0 1 N N N -12.466 -37.045 53.019 3.223 4.853 -2.651 H29 C4Z 69 C4Z H30 H30 H 0 1 N N N -12.827 -35.374 52.469 3.175 4.657 -0.883 H30 C4Z 70 C4Z H31 H31 H 0 1 N N N -14.896 -36.489 53.293 4.898 3.031 -2.807 H31 C4Z 71 C4Z H32 H32 H 0 1 N N N -14.655 -37.830 52.122 5.476 4.342 -1.751 H32 C4Z 72 C4Z H33 H33 H 0 1 N N N -15.090 -34.871 51.395 5.898 2.123 -0.728 H33 C4Z 73 C4Z H34 H34 H 0 1 N N N -16.319 -36.174 51.264 4.737 3.063 0.241 H34 C4Z 74 C4Z H35 H35 H 0 1 N N N -14.811 -37.416 49.705 4.020 0.917 -1.807 H35 C4Z 75 C4Z H36 H36 H 0 1 N N N -17.001 -37.041 48.853 5.882 -0.156 -0.349 H36 C4Z 76 C4Z H37 H37 H 0 1 N N N -14.227 -36.310 46.451 2.401 -1.147 -0.649 H37 C4Z 77 C4Z H38 H38 H 0 1 N N N -13.931 -38.673 45.754 3.374 -3.554 -2.255 H38 C4Z 78 C4Z H39 H39 H 0 1 N N N -15.371 -38.534 44.689 1.678 -3.192 -1.851 H39 C4Z 79 C4Z H40 H40 H 0 1 N N N -13.906 -37.551 44.352 2.588 -2.106 -2.929 H40 C4Z 80 C4Z H41 H41 H 0 1 N N N -15.293 -35.268 44.565 2.230 -3.259 0.611 H41 C4Z 81 C4Z H42 H42 H 0 1 N N N -17.495 -35.833 43.993 3.851 -4.485 -0.649 H42 C4Z 82 C4Z H43 H43 H 0 1 N N N -15.865 -34.200 46.646 3.025 -1.260 1.812 H43 C4Z 83 C4Z H44 H44 H 0 1 N N N -17.980 -33.379 46.044 4.228 -2.464 3.489 H44 C4Z 84 C4Z H45 H45 H 0 1 N N N -18.182 -36.199 46.874 5.811 -2.217 1.004 H45 C4Z 85 C4Z H46 H46 H 0 1 N N N -18.464 -35.080 48.908 6.399 -0.183 2.112 H46 C4Z 86 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C4Z CAC CAD SING N N 1 C4Z CAC CAB SING N N 2 C4Z CAD CAE SING N N 3 C4Z O4 C4 SING N N 4 C4Z OBG CBC SING N N 5 C4Z OBO CBM DOUB N N 6 C4Z OBN CBM SING N N 7 C4Z O6 C6 SING N N 8 C4Z CBM CAI SING N N 9 C4Z CAI O3 SING N N 10 C4Z CAI CAH SING N N 11 C4Z O3 C3 SING N N 12 C4Z CAB CAG SING N N 13 C4Z C4 C3 SING N N 14 C4Z C4 C5 SING N N 15 C4Z CBH CBB SING N N 16 C4Z CBC CBB SING N N 17 C4Z CBC CBD SING N N 18 C4Z C6 C5 SING N N 19 C4Z OBF CBD SING N N 20 C4Z CAE CAH SING N N 21 C4Z CAE CAF SING N N 22 C4Z C3 C2 SING N N 23 C4Z CBB OBA SING N N 24 C4Z C5 O5 SING N N 25 C4Z CBD CAZ SING N N 26 C4Z CAG CAF SING N N 27 C4Z O5 C1 SING N N 28 C4Z C2 C1 SING N N 29 C4Z C2 O2 SING N N 30 C4Z OBA CAY SING N N 31 C4Z CAZ CAY SING N N 32 C4Z CAZ OBE SING N N 33 C4Z C1 O1 SING N N 34 C4Z CAY OAX SING N N 35 C4Z O1 CAR SING N N 36 C4Z OAX CAS SING N N 37 C4Z CAR CAS SING N N 38 C4Z CAR CAW SING N N 39 C4Z CAS CAT SING N N 40 C4Z CAW CAV SING N N 41 C4Z CAT CAU SING N N 42 C4Z CAV CAU SING N N 43 C4Z C4 H1 SING N N 44 C4Z C5 H2 SING N N 45 C4Z C6 H3 SING N N 46 C4Z C6 H4 SING N N 47 C4Z C3 H5 SING N N 48 C4Z CAD H6 SING N N 49 C4Z CAD H7 SING N N 50 C4Z CAC H8 SING N N 51 C4Z CAC H9 SING N N 52 C4Z CAB H10 SING N N 53 C4Z CAB H11 SING N N 54 C4Z CAG H12 SING N N 55 C4Z CAG H13 SING N N 56 C4Z CAF H14 SING N N 57 C4Z CAF H15 SING N N 58 C4Z CAE H16 SING N N 59 C4Z CAH H17 SING N N 60 C4Z CAH H18 SING N N 61 C4Z CAI H19 SING N N 62 C4Z OBN H20 SING N N 63 C4Z C2 H21 SING N N 64 C4Z O2 H22 SING N N 65 C4Z O4 H23 SING N N 66 C4Z O6 H24 SING N N 67 C4Z C1 H25 SING N N 68 C4Z CAR H26 SING N N 69 C4Z CAW H27 SING N N 70 C4Z CAW H28 SING N N 71 C4Z CAV H29 SING N N 72 C4Z CAV H30 SING N N 73 C4Z CAU H31 SING N N 74 C4Z CAU H32 SING N N 75 C4Z CAT H33 SING N N 76 C4Z CAT H34 SING N N 77 C4Z CAS H35 SING N N 78 C4Z CAY H36 SING N N 79 C4Z CBB H37 SING N N 80 C4Z CBH H38 SING N N 81 C4Z CBH H39 SING N N 82 C4Z CBH H40 SING N N 83 C4Z CBC H41 SING N N 84 C4Z OBG H42 SING N N 85 C4Z CBD H43 SING N N 86 C4Z OBF H44 SING N N 87 C4Z CAZ H45 SING N N 88 C4Z OBE H46 SING N N 89 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor C4Z InChI InChI 1.03 "InChI=1S/C27H46O13/c1-13-19(29)21(31)22(32)26(36-13)38-15-9-5-6-10-16(15)39-27-23(33)24(20(30)18(12-28)40-27)37-17(25(34)35)11-14-7-3-2-4-8-14/h13-24,26-33H,2-12H2,1H3,(H,34,35)/t13-,15+,16+,17+,18+,19+,20-,21+,22-,23+,24-,26-,27+/m0/s1" C4Z InChIKey InChI 1.03 GNTJIZLFEURZBX-AUCBMRIBSA-N C4Z SMILES_CANONICAL CACTVS 3.385 "C[C@@H]1O[C@@H](O[C@@H]2CCCC[C@H]2O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O[C@H](CC4CCCCC4)C(O)=O)[C@H]3O)[C@@H](O)[C@H](O)[C@@H]1O" C4Z SMILES CACTVS 3.385 "C[CH]1O[CH](O[CH]2CCCC[CH]2O[CH]3O[CH](CO)[CH](O)[CH](O[CH](CC4CCCCC4)C(O)=O)[CH]3O)[CH](O)[CH](O)[CH]1O" C4Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)O[C@@H]2CCCC[C@H]2O[C@H]3[C@@H]([C@H]([C@H]([C@H](O3)CO)O)O[C@H](CC4CCCCC4)C(=O)O)O)O)O)O" C4Z SMILES "OpenEye OEToolkits" 2.0.6 "CC1C(C(C(C(O1)OC2CCCCC2OC3C(C(C(C(O3)CO)O)OC(CC4CCCCC4)C(=O)O)O)O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier C4Z "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{R})-3-cyclohexyl-2-[(2~{R},3~{S},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-6-[(1~{R},2~{R})-2-[(2~{S},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]oxycyclohexyl]oxy-3,5-bis(oxidanyl)oxan-4-yl]oxy-propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site C4Z "Create component" 2017-11-13 EBI C4Z "Initial release" 2018-11-21 RCSB #