data_C5D # _chem_comp.id C5D _chem_comp.name "(1R,3R)-5-[(2E)-3-{(1S,3R)-2,2,3-trimethyl-3-[6,6,6-trifluoro-5-hydroxy-5-(trifluoromethyl)hex-3-yn-1-yl]cyclopentyl}prop-2-en-1-ylidene]cyclohexane-1,3-diol" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H32 F6 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-07-14 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 482.499 _chem_comp.one_letter_code ? _chem_comp.three_letter_code C5D _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3DR1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal C5D C20 C20 C 0 1 N N N 3.170 30.313 37.315 -1.191 1.137 -0.256 C20 C5D 1 C5D C22 C22 C 0 1 N N N 2.604 29.660 36.046 -2.412 1.766 0.418 C22 C5D 2 C5D C23 C23 C 0 1 N N N 3.535 29.146 35.083 -3.527 0.806 0.408 C23 C5D 3 C5D C24 C24 C 0 1 N N N 4.296 28.721 34.289 -4.417 0.040 0.399 C24 C5D 4 C5D C25 C25 C 0 1 N N N 5.235 28.196 33.309 -5.532 -0.921 0.389 C25 C5D 5 C5D C27 C27 C 0 1 N N N 6.462 29.131 33.131 -6.753 -0.292 1.063 C27 C5D 6 C5D C26 C26 C 0 1 N N N 4.453 27.943 31.970 -5.878 -1.285 -1.056 C26 C5D 7 C5D O3 O3 O 0 1 N N N 5.671 26.960 33.881 -5.151 -2.101 1.099 O3 C5D 8 C5D F11 F11 F 0 1 N N N 7.339 28.580 32.282 -7.126 0.863 0.368 F11 C5D 9 C5D F19 F19 F 0 1 N N N 7.057 29.303 34.314 -7.813 -1.205 1.053 F19 C5D 10 C5D F21 F21 F 0 1 N N N 6.079 30.322 32.656 -6.437 0.041 2.384 F21 C5D 11 C5D F28 F28 F 0 1 N N N 5.251 27.397 31.058 -4.762 -1.860 -1.673 F28 C5D 12 C5D F29 F29 F 0 1 N N N 3.973 29.094 31.488 -6.938 -2.198 -1.066 F29 C5D 13 C5D F30 F30 F 0 1 N N N 3.432 27.116 32.189 -6.252 -0.130 -1.752 F30 C5D 14 C5D O2 O2 O 0 1 N N N 0.946 40.305 40.531 9.431 -3.055 0.403 O2 C5D 15 C5D C1 C1 C 0 1 N N R 3.278 39.332 38.887 8.387 0.556 0.377 C1 C5D 16 C5D C2 C2 C 0 1 N N N 2.449 40.630 38.645 9.309 -0.650 0.194 C2 C5D 17 C5D C3 C3 C 0 1 N N R 0.968 40.471 39.110 8.543 -1.939 0.495 C3 C5D 18 C5D C4 C4 C 0 1 N N N 0.293 39.253 38.416 7.407 -2.105 -0.520 C4 C5D 19 C5D C5 C5 C 0 1 N N N 1.056 37.947 38.610 6.556 -0.854 -0.498 C5 C5D 20 C5D C6 C6 C 0 1 N N N 0.530 36.822 39.072 5.237 -0.930 -0.357 C6 C5D 21 C5D C7 C7 C 0 1 N N N 1.084 35.460 39.363 4.440 0.300 -0.230 C7 C5D 22 C5D C8 C8 C 0 1 N N N 0.535 34.299 39.068 3.136 0.223 0.015 C8 C5D 23 C5D C10 C10 C 0 1 N N N 2.544 38.106 38.259 7.246 0.484 -0.642 C10 C5D 24 C5D C12 C12 C 0 1 N N N 0.079 32.038 37.180 1.640 2.377 -2.108 C12 C5D 25 C5D C13 C13 C 0 1 N N N 1.491 32.257 37.807 1.204 1.516 -0.921 C13 C5D 26 C5D C14 C14 C 0 1 N N S 1.262 32.963 39.197 2.319 1.483 0.145 C14 C5D 27 C5D C15 C15 C 0 1 N N N 2.699 32.902 39.841 1.556 1.497 1.493 C15 C5D 28 C5D C16 C16 C 0 1 N N N 3.314 31.585 39.296 0.375 2.458 1.208 C16 C5D 29 C5D C17 C17 C 0 1 N N S 2.258 31.009 38.336 -0.032 2.136 -0.245 C17 C5D 30 C5D C18 C18 C 0 1 N N N 2.203 33.182 36.767 0.887 0.095 -1.393 C18 C5D 31 C5D O1 O1 O 0 1 N N N 4.634 39.472 38.424 7.847 0.546 1.700 O1 C5D 32 C5D C9 C9 C 0 1 N N N 1.314 30.076 39.163 -0.439 3.419 -0.973 C9 C5D 33 C5D H20 H20 H 0 1 N N N 3.669 29.503 37.867 -0.900 0.237 0.285 H20 C5D 34 C5D H20A H20A H 0 0 N N N 3.768 31.145 36.915 -1.438 0.878 -1.286 H20A C5D 35 C5D H22 H22 H 0 1 N N N 1.987 28.811 36.375 -2.165 2.026 1.448 H22 C5D 36 C5D H22A H22A H 0 0 N N N 2.078 30.472 35.523 -2.703 2.666 -0.124 H22A C5D 37 C5D HO3 HO3 H 0 1 N N N 5.768 26.310 33.195 -4.382 -2.553 0.726 HO3 C5D 38 C5D HO2 HO2 H 0 1 N N N 0.941 39.379 40.742 9.012 -3.907 0.582 HO2 C5D 39 C5D H1 H1 H 0 1 N N N 3.352 39.154 39.970 8.955 1.474 0.223 H1 C5D 40 C5D H2 H2 H 0 1 N N N 2.909 41.452 39.212 9.672 -0.676 -0.834 H2 C5D 41 C5D H2A H2A H 0 1 N N N 2.448 40.838 37.565 10.157 -0.565 0.874 H2A C5D 42 C5D H3 H3 H 0 1 N N N 0.403 41.372 38.828 8.127 -1.888 1.502 H3 C5D 43 C5D H4 H4 H 0 1 N N N -0.714 39.129 38.842 7.825 -2.247 -1.516 H4 C5D 44 C5D H4A H4A H 0 1 N N N 0.271 39.462 37.336 6.797 -2.967 -0.249 H4A C5D 45 C5D H6 H6 H 0 1 N N N -0.526 36.904 39.285 4.751 -1.894 -0.336 H6 C5D 46 C5D H7 H7 H 0 1 N N N 2.037 35.427 39.870 4.914 1.264 -0.335 H7 C5D 47 C5D H8 H8 H 0 1 N N N -0.486 34.292 38.715 2.662 -0.741 0.120 H8 C5D 48 C5D H10 H10 H 0 1 N N N 2.611 38.211 37.166 6.532 1.286 -0.450 H10 C5D 49 C5D H10A H10A H 0 0 N N N 3.043 37.218 38.674 7.648 0.582 -1.650 H10A C5D 50 C5D H12 H12 H 0 1 N N N -0.674 31.986 37.980 2.530 1.944 -2.564 H12 C5D 51 C5D H12A H12A H 0 0 N N N -0.157 32.876 36.508 0.836 2.416 -2.843 H12A C5D 52 C5D H12B H12B H 0 0 N N N 0.073 31.097 36.610 1.864 3.386 -1.762 H12B C5D 53 C5D H14 H14 H 0 1 N N N 0.547 32.485 39.883 2.957 2.362 0.057 H14 C5D 54 C5D H15 H15 H 0 1 N N N 3.303 33.773 39.548 1.191 0.500 1.741 H15 C5D 55 C5D H15A H15A H 0 0 N N N 2.663 32.921 40.940 2.188 1.888 2.291 H15A C5D 56 C5D H16 H16 H 0 1 N N N 4.258 31.783 38.767 -0.452 2.258 1.888 H16 C5D 57 C5D H16A H16A H 0 0 N N N 3.555 30.882 40.107 0.698 3.495 1.292 H16A C5D 58 C5D H18 H18 H 0 1 N N N 2.370 34.174 37.212 1.773 -0.339 -1.858 H18 C5D 59 C5D H18A H18A H 0 0 N N N 3.170 32.739 36.484 0.590 -0.513 -0.539 H18A C5D 60 C5D H18B H18B H 0 0 N N N 1.570 33.283 35.873 0.074 0.126 -2.118 H18B C5D 61 C5D HO1 HO1 H 0 1 N N N 4.643 39.503 37.475 7.251 1.285 1.887 HO1 C5D 62 C5D H9 H9 H 0 1 N N N 1.776 29.857 40.137 -1.307 3.856 -0.480 H9 C5D 63 C5D H9A H9A H 0 1 N N N 0.348 30.578 39.320 0.389 4.128 -0.949 H9A C5D 64 C5D H9B H9B H 0 1 N N N 1.154 29.136 38.614 -0.688 3.186 -2.008 H9B C5D 65 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C5D C20 C22 SING N N 1 C5D C20 C17 SING N N 2 C5D C22 C23 SING N N 3 C5D C23 C24 TRIP N N 4 C5D C24 C25 SING N N 5 C5D C25 C27 SING N N 6 C5D C25 C26 SING N N 7 C5D C25 O3 SING N N 8 C5D C27 F11 SING N N 9 C5D C27 F19 SING N N 10 C5D C27 F21 SING N N 11 C5D C26 F28 SING N N 12 C5D C26 F29 SING N N 13 C5D C26 F30 SING N N 14 C5D O2 C3 SING N N 15 C5D C1 C2 SING N N 16 C5D C1 C10 SING N N 17 C5D C1 O1 SING N N 18 C5D C2 C3 SING N N 19 C5D C3 C4 SING N N 20 C5D C4 C5 SING N N 21 C5D C5 C6 DOUB N N 22 C5D C5 C10 SING N N 23 C5D C6 C7 SING N N 24 C5D C7 C8 DOUB N N 25 C5D C8 C14 SING N N 26 C5D C12 C13 SING N N 27 C5D C13 C14 SING N N 28 C5D C13 C17 SING N N 29 C5D C13 C18 SING N N 30 C5D C14 C15 SING N N 31 C5D C15 C16 SING N N 32 C5D C16 C17 SING N N 33 C5D C17 C9 SING N N 34 C5D C20 H20 SING N N 35 C5D C20 H20A SING N N 36 C5D C22 H22 SING N N 37 C5D C22 H22A SING N E 38 C5D O3 HO3 SING N N 39 C5D O2 HO2 SING N N 40 C5D C1 H1 SING N N 41 C5D C2 H2 SING N N 42 C5D C2 H2A SING N N 43 C5D C3 H3 SING N N 44 C5D C4 H4 SING N N 45 C5D C4 H4A SING N N 46 C5D C6 H6 SING N N 47 C5D C7 H7 SING N N 48 C5D C8 H8 SING N N 49 C5D C10 H10 SING N N 50 C5D C10 H10A SING N N 51 C5D C12 H12 SING N N 52 C5D C12 H12A SING N N 53 C5D C12 H12B SING N N 54 C5D C14 H14 SING N N 55 C5D C15 H15 SING N N 56 C5D C15 H15A SING N N 57 C5D C16 H16 SING N N 58 C5D C16 H16A SING N N 59 C5D C18 H18 SING N N 60 C5D C18 H18A SING N N 61 C5D C18 H18B SING N N 62 C5D O1 HO1 SING N N 63 C5D C9 H9 SING N N 64 C5D C9 H9A SING N N 65 C5D C9 H9B SING N N 66 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor C5D SMILES ACDLabs 10.04 "FC(F)(F)C(O)(C#CCCC2(C)CCC(/C=C/C=C1\CC(O)CC(O)C1)C2(C)C)C(F)(F)F" C5D SMILES_CANONICAL CACTVS 3.341 "CC1(C)[C@@H](CC[C@]1(C)CCC#CC(O)(C(F)(F)F)C(F)(F)F)/C=C/C=C2/C[C@@H](O)C[C@H](O)C2" C5D SMILES CACTVS 3.341 "CC1(C)[CH](CC[C]1(C)CCC#CC(O)(C(F)(F)F)C(F)(F)F)C=CC=C2C[CH](O)C[CH](O)C2" C5D SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC1([C@@H](CC[C@]1(C)CCC#CC(C(F)(F)F)(C(F)(F)F)O)\C=C\C=C2C[C@H](C[C@@H](C2)O)O)C" C5D SMILES "OpenEye OEToolkits" 1.5.0 "CC1(C(CCC1(C)CCC#CC(C(F)(F)F)(C(F)(F)F)O)C=CC=C2CC(CC(C2)O)O)C" C5D InChI InChI 1.03 "InChI=1S/C24H32F6O3/c1-20(2)17(8-6-7-16-13-18(31)15-19(32)14-16)9-12-21(20,3)10-4-5-11-22(33,23(25,26)27)24(28,29)30/h6-8,17-19,31-33H,4,9-10,12-15H2,1-3H3/b8-6+/t17-,18-,19-,21+/m1/s1" C5D InChIKey InChI 1.03 PCHUQQNKOFNVDU-OSXMSNBXSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier C5D "SYSTEMATIC NAME" ACDLabs 10.04 "(1R,3R)-5-[(2E)-3-{(1S,3R)-2,2,3-trimethyl-3-[6,6,6-trifluoro-5-hydroxy-5-(trifluoromethyl)hex-3-yn-1-yl]cyclopentyl}prop-2-en-1-ylidene]cyclohexane-1,3-diol" C5D "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(1R,3R)-5-[(E)-3-[(1S,3R)-2,2,3-trimethyl-3-[6,6,6-trifluoro-5-hydroxy-5-(trifluoromethyl)hex-3-ynyl]cyclopentyl]prop-2-enylidene]cyclohexane-1,3-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site C5D "Create component" 2008-07-14 PDBJ C5D "Modify descriptor" 2011-06-04 RCSB #