data_C5R # _chem_comp.id C5R _chem_comp.name "(2S)-2-[[(1R,4aS,10aR)-1,4a-dimethyl-7-propan-2-yl-2,3,4,9,10,10a-hexahydrophenanthren-1-yl]carbonylamino]-3-(1H-indol-3-yl)propanoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H38 N2 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms N-Dehydroabietoyl-L-Tryptophan _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-04-10 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 486.645 _chem_comp.one_letter_code ? _chem_comp.three_letter_code C5R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6JS8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal C5R N1 N1 N 0 1 N N N 1.310 -7.515 28.838 2.349 1.100 -0.460 N1 C5R 1 C5R C6 C1 C 0 1 Y N N 2.274 -4.036 25.316 -3.595 -0.484 -0.380 C6 C5R 2 C5R C7 C2 C 0 1 Y N N 2.417 -2.648 25.068 -4.746 -0.502 -1.149 C7 C5R 3 C5R C8 C3 C 0 1 Y N N 1.534 -1.938 24.263 -5.977 -0.259 -0.571 C8 C5R 4 C5R C9 C4 C 0 1 Y N N 0.481 -2.599 23.662 -6.055 0.001 0.785 C9 C5R 5 C5R C10 C5 C 0 1 N N N -0.472 -1.855 22.774 -7.393 0.270 1.425 C10 C5R 6 C5R C11 C6 C 0 1 N N N 0.300 -1.042 21.724 -8.031 1.500 0.776 C11 C5R 7 C5R C12 C7 C 0 1 N N N -1.429 -0.990 23.619 -8.306 -0.942 1.228 C12 C5R 8 C5R C13 C8 C 0 1 Y N N 0.348 -3.975 23.865 -4.909 0.014 1.549 C13 C5R 9 C5R N2 N2 N 0 1 Y N N 1.233 -6.574 33.186 5.441 -1.130 2.343 N2 C5R 10 C5R O3 O1 O 0 1 N N N -2.104 -8.216 29.357 3.605 4.504 0.182 O3 C5R 11 C5R C22 C9 C 0 1 N N N -1.045 -7.596 29.155 2.950 3.447 -0.323 C22 C5R 12 C5R O2 O2 O 0 1 N N N -0.973 -6.365 28.882 2.181 3.595 -1.243 O2 C5R 13 C5R C21 C10 C 0 1 N N S 0.228 -8.391 29.230 3.173 2.075 0.258 C21 C5R 14 C5R C23 C11 C 0 1 N N N 0.380 -9.073 30.588 4.649 1.696 0.119 C23 C5R 15 C5R C24 C12 C 0 1 Y N N 0.448 -8.090 31.744 4.897 0.379 0.809 C24 C5R 16 C5R C27 C13 C 0 1 Y N N 1.560 -7.358 32.115 5.338 0.206 2.065 C27 C5R 17 C5R C26 C14 C 0 1 Y N N -0.075 -6.766 33.512 5.059 -1.868 1.245 C26 C5R 18 C5R C31 C15 C 0 1 Y N N -0.941 -6.248 34.491 4.978 -3.233 0.989 C31 C5R 19 C5R C30 C16 C 0 1 Y N N -2.282 -6.658 34.569 4.546 -3.674 -0.242 C30 C5R 20 C5R C29 C17 C 0 1 Y N N -2.762 -7.600 33.659 4.190 -2.769 -1.233 C29 C5R 21 C5R C28 C18 C 0 1 Y N N -1.880 -8.106 32.688 4.261 -1.424 -1.003 C28 C5R 22 C5R C25 C19 C 0 1 Y N N -0.557 -7.700 32.618 4.696 -0.955 0.238 C25 C5R 23 C5R C1 C20 C 0 1 N N N 2.474 -7.919 28.311 1.065 0.908 -0.101 C1 C5R 24 C5R O1 O3 O 0 1 N N N 2.770 -9.103 28.192 0.591 1.542 0.818 O1 C5R 25 C5R C2 C21 C 0 1 N N R 3.410 -6.852 27.778 0.206 -0.108 -0.849 C2 C5R 26 C5R C3 C22 C 0 1 N N N 4.661 -7.568 27.280 0.908 -1.461 -0.738 C3 C5R 27 C5R C19 C23 C 0 1 N N N 3.771 -5.890 28.916 0.167 0.347 -2.309 C19 C5R 28 C5R C18 C24 C 0 1 N N N 4.479 -4.632 28.430 -0.900 -0.388 -3.111 C18 C5R 29 C5R C17 C25 C 0 1 N N N 3.661 -3.888 27.382 -2.273 -0.178 -2.471 C17 C5R 30 C5R C5 C26 C 0 1 N N S 3.276 -4.775 26.188 -2.267 -0.753 -1.057 C5 C5R 31 C5R C20 C27 C 0 1 N N N 4.500 -4.970 25.280 -2.120 -2.272 -1.142 C20 C5R 32 C5R C4 C28 C 0 1 N N R 2.618 -6.070 26.722 -1.171 -0.112 -0.226 C4 C5R 33 C5R C16 C29 C 0 1 N N N 2.064 -6.944 25.593 -1.199 -0.697 1.184 C16 C5R 34 C5R C15 C30 C 0 1 N N N 0.954 -6.184 24.878 -2.468 -0.200 1.880 C15 C5R 35 C5R C14 C31 C 0 1 Y N N 1.227 -4.701 24.684 -3.666 -0.231 0.972 C14 C5R 36 C5R H1 H1 H 0 1 N N N 1.180 -6.532 28.970 2.727 0.595 -1.198 H1 C5R 37 C5R H2 H2 H 0 1 N N N 3.244 -2.122 25.522 -4.693 -0.707 -2.208 H2 C5R 38 C5R H3 H3 H 0 1 N N N 1.670 -0.878 24.109 -6.871 -0.273 -1.175 H3 C5R 39 C5R H4 H4 H 0 1 N N N -1.083 -2.595 22.237 -7.255 0.452 2.491 H4 C5R 40 C5R H5 H5 H 0 1 N N N 0.963 -1.711 21.156 -8.168 1.318 -0.290 H5 C5R 41 C5R H6 H6 H 0 1 N N N -0.412 -0.561 21.037 -8.998 1.694 1.239 H6 C5R 42 C5R H7 H7 H 0 1 N N N 0.902 -0.271 22.227 -7.381 2.363 0.916 H7 C5R 43 C5R H8 H8 H 0 1 N N N -1.951 -1.626 24.349 -7.851 -1.818 1.690 H8 C5R 44 C5R H9 H9 H 0 1 N N N -0.853 -0.218 24.150 -9.273 -0.748 1.691 H9 C5R 45 C5R H10 H10 H 0 1 N N N -2.166 -0.508 22.960 -8.443 -1.124 0.162 H10 C5R 46 C5R H11 H11 H 0 1 N N N -0.459 -4.498 23.375 -4.973 0.216 2.608 H11 C5R 47 C5R H12 H12 H 0 1 N N N 1.859 -5.954 33.658 5.742 -1.502 3.187 H12 C5R 48 C5R H13 H13 H 0 1 N N N -2.840 -7.622 29.274 3.429 5.364 -0.224 H13 C5R 49 C5R H14 H14 H 0 1 N N N 0.154 -9.191 28.479 2.897 2.077 1.313 H14 C5R 50 C5R H15 H15 H 0 1 N N N -0.482 -9.738 30.744 4.904 1.606 -0.937 H15 C5R 51 C5R H16 H16 H 0 1 N N N 1.305 -9.668 30.579 5.267 2.468 0.578 H16 C5R 52 C5R H17 H17 H 0 1 N N N 2.528 -7.399 31.637 5.576 1.003 2.754 H17 C5R 53 C5R H18 H18 H 0 1 N N N -0.568 -5.521 35.197 5.254 -3.945 1.753 H18 C5R 54 C5R H19 H19 H 0 1 N N N -2.935 -6.248 35.326 4.485 -4.734 -0.439 H19 C5R 55 C5R H20 H20 H 0 1 N N N -3.788 -7.933 33.699 3.853 -3.131 -2.193 H20 C5R 56 C5R H21 H21 H 0 1 N N N -2.244 -8.832 31.976 3.982 -0.726 -1.779 H21 C5R 57 C5R H22 H22 H 0 1 N N N 5.143 -8.091 28.119 0.900 -1.790 0.301 H22 C5R 58 C5R H23 H23 H 0 1 N N N 4.382 -8.297 26.505 0.385 -2.192 -1.355 H23 C5R 59 C5R H24 H24 H 0 1 N N N 5.360 -6.832 26.856 1.938 -1.365 -1.082 H24 C5R 60 C5R H25 H25 H 0 1 N N N 2.846 -5.594 29.432 -0.035 1.422 -2.342 H25 C5R 61 C5R H26 H26 H 0 1 N N N 4.433 -6.414 29.621 1.145 0.169 -2.764 H26 C5R 62 C5R H27 H27 H 0 1 N N N 5.446 -4.916 27.990 -0.923 0.024 -4.128 H27 C5R 63 C5R H28 H28 H 0 1 N N N 4.648 -3.965 29.288 -0.663 -1.445 -3.184 H28 C5R 64 C5R H29 H29 H 0 1 N N N 4.253 -3.038 27.012 -2.500 0.888 -2.430 H29 C5R 65 C5R H30 H30 H 0 1 N N N 2.740 -3.515 27.854 -3.031 -0.686 -3.070 H30 C5R 66 C5R H31 H31 H 0 1 N N N 5.287 -5.503 25.834 -2.992 -2.694 -1.642 H31 C5R 67 C5R H32 H32 H 0 1 N N N 4.211 -5.558 24.396 -1.222 -2.519 -1.708 H32 C5R 68 C5R H33 H33 H 0 1 N N N 4.879 -3.988 24.959 -2.041 -2.686 -0.137 H33 C5R 69 C5R H34 H34 H 0 1 N N N 1.724 -5.718 27.258 -1.462 0.963 -0.110 H34 C5R 70 C5R H35 H35 H 0 1 N N N 1.661 -7.877 26.013 -1.186 -1.781 1.176 H35 C5R 71 C5R H36 H36 H 0 1 N N N 2.868 -7.180 24.880 -0.334 -0.345 1.755 H36 C5R 72 C5R H37 H37 H 0 1 N N N 0.031 -6.289 25.468 -2.663 -0.831 2.749 H37 C5R 73 C5R H38 H38 H 0 1 N N N 0.810 -6.639 23.887 -2.305 0.824 2.221 H38 C5R 74 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C5R C11 C10 SING N N 1 C5R C10 C12 SING N N 2 C5R C10 C9 SING N N 3 C5R C9 C13 DOUB Y N 4 C5R C9 C8 SING Y N 5 C5R C13 C14 SING Y N 6 C5R C8 C7 DOUB Y N 7 C5R C14 C15 SING N N 8 C5R C14 C6 DOUB Y N 9 C5R C15 C16 SING N N 10 C5R C7 C6 SING Y N 11 C5R C20 C5 SING N N 12 C5R C6 C5 SING N N 13 C5R C16 C4 SING N N 14 C5R C5 C4 SING N N 15 C5R C5 C17 SING N N 16 C5R C4 C2 SING N N 17 C5R C3 C2 SING N N 18 C5R C17 C18 SING N N 19 C5R C2 C1 SING N N 20 C5R C2 C19 SING N N 21 C5R O1 C1 DOUB N N 22 C5R C1 N1 SING N N 23 C5R C18 C19 SING N N 24 C5R N1 C21 SING N N 25 C5R O2 C22 DOUB N N 26 C5R C22 C21 SING N N 27 C5R C22 O3 SING N N 28 C5R C21 C23 SING N N 29 C5R C23 C24 SING N N 30 C5R C24 C27 DOUB Y N 31 C5R C24 C25 SING Y N 32 C5R C27 N2 SING Y N 33 C5R C25 C28 SING Y N 34 C5R C25 C26 DOUB Y N 35 C5R C28 C29 DOUB Y N 36 C5R N2 C26 SING Y N 37 C5R C26 C31 SING Y N 38 C5R C29 C30 SING Y N 39 C5R C31 C30 DOUB Y N 40 C5R N1 H1 SING N N 41 C5R C7 H2 SING N N 42 C5R C8 H3 SING N N 43 C5R C10 H4 SING N N 44 C5R C11 H5 SING N N 45 C5R C11 H6 SING N N 46 C5R C11 H7 SING N N 47 C5R C12 H8 SING N N 48 C5R C12 H9 SING N N 49 C5R C12 H10 SING N N 50 C5R C13 H11 SING N N 51 C5R N2 H12 SING N N 52 C5R O3 H13 SING N N 53 C5R C21 H14 SING N N 54 C5R C23 H15 SING N N 55 C5R C23 H16 SING N N 56 C5R C27 H17 SING N N 57 C5R C31 H18 SING N N 58 C5R C30 H19 SING N N 59 C5R C29 H20 SING N N 60 C5R C28 H21 SING N N 61 C5R C3 H22 SING N N 62 C5R C3 H23 SING N N 63 C5R C3 H24 SING N N 64 C5R C19 H25 SING N N 65 C5R C19 H26 SING N N 66 C5R C18 H27 SING N N 67 C5R C18 H28 SING N N 68 C5R C17 H29 SING N N 69 C5R C17 H30 SING N N 70 C5R C20 H31 SING N N 71 C5R C20 H32 SING N N 72 C5R C20 H33 SING N N 73 C5R C4 H34 SING N N 74 C5R C16 H35 SING N N 75 C5R C16 H36 SING N N 76 C5R C15 H37 SING N N 77 C5R C15 H38 SING N N 78 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor C5R InChI InChI 1.03 "InChI=1S/C31H38N2O3/c1-19(2)20-10-12-24-21(16-20)11-13-27-30(24,3)14-7-15-31(27,4)29(36)33-26(28(34)35)17-22-18-32-25-9-6-5-8-23(22)25/h5-6,8-10,12,16,18-19,26-27,32H,7,11,13-15,17H2,1-4H3,(H,33,36)(H,34,35)/t26-,27+,30+,31+/m0/s1" C5R InChIKey InChI 1.03 WYAQKAIGBDDJPR-QKOWHPQASA-N C5R SMILES_CANONICAL CACTVS 3.385 "CC(C)c1ccc2c(CC[C@H]3[C@@](C)(CCC[C@]23C)C(=O)N[C@@H](Cc4c[nH]c5ccccc45)C(O)=O)c1" C5R SMILES CACTVS 3.385 "CC(C)c1ccc2c(CC[CH]3[C](C)(CCC[C]23C)C(=O)N[CH](Cc4c[nH]c5ccccc45)C(O)=O)c1" C5R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC(C)c1ccc2c(c1)CC[C@@H]3[C@@]2(CCC[C@@]3(C)C(=O)N[C@@H](Cc4c[nH]c5c4cccc5)C(=O)O)C" C5R SMILES "OpenEye OEToolkits" 2.0.6 "CC(C)c1ccc2c(c1)CCC3C2(CCCC3(C)C(=O)NC(Cc4c[nH]c5c4cccc5)C(=O)O)C" # _pdbx_chem_comp_identifier.comp_id C5R _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-[[(1~{R},4~{a}~{S},10~{a}~{R})-1,4~{a}-dimethyl-7-propan-2-yl-2,3,4,9,10,10~{a}-hexahydrophenanthren-1-yl]carbonylamino]-3-(1~{H}-indol-3-yl)propanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site C5R "Create component" 2019-04-10 PDBJ C5R "Initial release" 2020-03-18 RCSB C5R "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id C5R _pdbx_chem_comp_synonyms.name N-Dehydroabietoyl-L-Tryptophan _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##