data_C6S # _chem_comp.id C6S _chem_comp.name "(3R)-3-(cyclohexylcarbonylamino)-2-oxidanyl-3,4-dihydro-1,2-benzoxaborinine-8-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H20 B N O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-12-08 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 317.145 _chem_comp.one_letter_code ? _chem_comp.three_letter_code C6S _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5FQ9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal C6S O01 O01 O 0 1 N N N N N N -11.533 -20.242 17.579 0.120 1.877 -1.406 O01 C6S 1 C6S B02 B02 B 0 1 N N N N N N -11.420 -20.240 16.132 0.697 0.952 -0.496 B02 C6S 2 C6S O03 O03 O 0 1 N N N N N N -12.563 -19.560 15.621 2.072 1.013 -0.138 O03 C6S 3 C6S C04 C04 C 0 1 Y N N N N N -13.654 -20.421 15.199 2.688 -0.192 -0.032 C04 C6S 4 C6S C05 C05 C 0 1 Y N N N N N -13.370 -21.552 14.437 2.021 -1.400 -0.038 C05 C6S 5 C6S C06 C06 C 0 1 N N N N N N -11.884 -21.807 14.105 0.526 -1.522 -0.188 C06 C6S 6 C6S C07 C07 C 0 1 N N R N N N -11.130 -21.665 15.391 -0.157 -0.195 0.177 C07 C6S 7 C6S N08 N08 N 0 1 N N N N N N -11.620 -22.722 16.254 -1.525 -0.173 -0.346 N08 C6S 8 C6S C09 C09 C 0 1 N N N N N N -11.143 -24.072 16.079 -2.529 0.310 0.413 C09 C6S 9 C6S O10 O10 O 0 1 N N N N N N -10.297 -24.311 15.222 -2.299 0.728 1.528 O10 C6S 10 C6S C11 C11 C 0 1 N N N N N N -11.729 -25.155 17.030 -3.937 0.333 -0.125 C11 C6S 11 C6S C12 C12 C 0 1 N N N N N N -10.841 -26.389 17.054 -4.875 0.926 0.928 C12 C6S 12 C6S C13 C13 C 0 1 N N N N N N -11.437 -27.443 17.969 -6.304 0.949 0.382 C13 C6S 13 C6S C14 C14 C 0 1 N N N N N N -12.858 -27.796 17.600 -6.746 -0.478 0.050 C14 C6S 14 C6S C15 C15 C 0 1 N N N N N N -13.764 -26.594 17.462 -5.808 -1.071 -1.003 C15 C6S 15 C6S C16 C16 C 0 1 N N N N N N -13.154 -25.499 16.597 -4.378 -1.094 -0.457 C16 C6S 16 C6S C17 C17 C 0 1 Y N N N N N -14.438 -22.377 14.053 2.741 -2.581 0.092 C17 C6S 17 C6S C18 C18 C 0 1 Y N N N N N -15.756 -22.047 14.431 4.117 -2.569 0.218 C18 C6S 18 C6S C19 C19 C 0 1 Y N N N N N -16.021 -20.895 15.201 4.799 -1.372 0.216 C19 C6S 19 C6S C20 C20 C 0 1 Y N N N N N -14.939 -20.098 15.582 4.092 -0.176 0.092 C20 C6S 20 C6S C21 C21 C 0 1 N N N N N N -15.056 -18.841 16.383 4.815 1.108 0.089 C21 C6S 21 C6S O22 O22 O 0 1 N N N N N N -15.877 -18.761 17.307 4.202 2.151 -0.020 O22 C6S 22 C6S O23 O23 O 0 1 N N N N N N -14.320 -17.866 16.101 6.158 1.125 0.208 O23 C6S 23 C6S H01 H01 H 0 1 N N N N N N -12.331 -19.795 17.835 0.743 2.534 -1.747 H01 C6S 24 C6S H07 H07 H 0 1 N N N N N N -10.048 -21.761 15.217 -0.169 -0.064 1.259 H07 C6S 25 C6S H061 H061 H 0 0 N N N N N N -11.754 -22.821 13.698 0.286 -1.781 -1.219 H061 C6S 26 C6S H062 H062 H 0 0 N N N N N N -11.527 -21.069 13.372 0.160 -2.307 0.473 H062 C6S 27 C6S H17 H17 H 0 1 N N N N N N -14.251 -23.265 13.468 2.216 -3.525 0.096 H17 C6S 28 C6S H08 H08 H 0 1 N N N N N N -12.288 -22.515 16.969 -1.709 -0.507 -1.238 H08 C6S 29 C6S H11 H11 H 0 1 N N N N N N -11.767 -24.733 18.045 -3.971 0.943 -1.028 H11 C6S 30 C6S H121 H121 H 0 0 N N N N N N -10.757 -26.797 16.036 -4.841 0.316 1.830 H121 C6S 31 C6S H122 H122 H 0 0 N N N N N N -9.842 -26.111 17.421 -4.560 1.942 1.164 H122 C6S 32 C6S H161 H161 H 0 0 N N N N N N -13.777 -24.596 16.676 -3.710 -1.516 -1.207 H161 C6S 33 C6S H162 H162 H 0 0 N N N N N N -13.135 -25.841 15.552 -4.344 -1.704 0.445 H162 C6S 34 C6S H131 H131 H 0 0 N N N N N N -10.821 -28.352 17.907 -6.973 1.371 1.131 H131 C6S 35 C6S H132 H132 H 0 0 N N N N N N -11.425 -27.061 19.001 -6.339 1.559 -0.521 H132 C6S 36 C6S H141 H141 H 0 0 N N N N N N -12.845 -28.333 16.640 -6.712 -1.088 0.952 H141 C6S 37 C6S H142 H142 H 0 0 N N N N N N -13.268 -28.452 18.382 -7.764 -0.462 -0.339 H142 C6S 38 C6S H151 H151 H 0 0 N N N N N N -14.711 -26.917 17.006 -6.122 -2.087 -1.240 H151 C6S 39 C6S H152 H152 H 0 0 N N N N N N -13.961 -26.184 18.464 -5.842 -0.461 -1.906 H152 C6S 40 C6S H18 H18 H 0 1 N N N N N N -16.573 -22.684 14.127 4.658 -3.498 0.319 H18 C6S 41 C6S H19 H19 H 0 1 N N N N N N -17.030 -20.637 15.487 5.875 -1.360 0.311 H19 C6S 42 C6S H23 H23 H 0 1 N N N N N N -14.513 -17.143 16.686 6.588 1.992 0.201 H23 C6S 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C6S O01 B02 SING N N 1 C6S B02 O03 SING N N 2 C6S B02 C07 SING N N 3 C6S O03 C04 SING N N 4 C6S C04 C05 SING Y N 5 C6S C04 C20 DOUB Y N 6 C6S C05 C06 SING N N 7 C6S C05 C17 DOUB Y N 8 C6S C06 C07 SING N N 9 C6S C07 N08 SING N N 10 C6S N08 C09 SING N N 11 C6S C09 O10 DOUB N N 12 C6S C09 C11 SING N N 13 C6S C11 C12 SING N N 14 C6S C11 C16 SING N N 15 C6S C12 C13 SING N N 16 C6S C13 C14 SING N N 17 C6S C14 C15 SING N N 18 C6S C15 C16 SING N N 19 C6S C17 C18 SING Y N 20 C6S C18 C19 DOUB Y N 21 C6S C19 C20 SING Y N 22 C6S C20 C21 SING N N 23 C6S C21 O22 DOUB N N 24 C6S C21 O23 SING N N 25 C6S O01 H01 SING N N 26 C6S C07 H07 SING N N 27 C6S C06 H061 SING N N 28 C6S C06 H062 SING N N 29 C6S C17 H17 SING N N 30 C6S N08 H08 SING N N 31 C6S C11 H11 SING N N 32 C6S C12 H121 SING N N 33 C6S C12 H122 SING N N 34 C6S C16 H161 SING N N 35 C6S C16 H162 SING N N 36 C6S C13 H131 SING N N 37 C6S C13 H132 SING N N 38 C6S C14 H141 SING N N 39 C6S C14 H142 SING N N 40 C6S C15 H151 SING N N 41 C6S C15 H152 SING N N 42 C6S C18 H18 SING N N 43 C6S C19 H19 SING N N 44 C6S O23 H23 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor C6S InChI InChI 1.03 "InChI=1S/C16H20BNO5/c19-15(10-5-2-1-3-6-10)18-13-9-11-7-4-8-12(16(20)21)14(11)23-17(13)22/h4,7-8,10,13,22H,1-3,5-6,9H2,(H,18,19)(H,20,21)/t13-/m0/s1" C6S InChIKey InChI 1.03 ZRHUJXRVIMMHFG-ZDUSSCGKSA-N C6S SMILES_CANONICAL CACTVS 3.385 "OB1Oc2c(C[C@@H]1NC(=O)C3CCCCC3)cccc2C(O)=O" C6S SMILES CACTVS 3.385 "OB1Oc2c(C[CH]1NC(=O)C3CCCCC3)cccc2C(O)=O" C6S SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "B1([C@H](Cc2cccc(c2O1)C(=O)O)NC(=O)C3CCCCC3)O" C6S SMILES "OpenEye OEToolkits" 1.7.6 "B1(C(Cc2cccc(c2O1)C(=O)O)NC(=O)C3CCCCC3)O" # _pdbx_chem_comp_identifier.comp_id C6S _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 1.7.6 _pdbx_chem_comp_identifier.identifier "(3R)-3-(cyclohexylcarbonylamino)-2-oxidanyl-3,4-dihydro-1,2-benzoxaborinine-8-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site C6S "Create component" 2015-12-08 EBI C6S "Initial release" 2016-08-17 RCSB C6S "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id C6S _pdbx_chem_comp_pcm.modified_residue_id SER _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom B02 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #