data_C7Z
#
_chem_comp.id C7Z
_chem_comp.name
"(1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C40 H56 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-11-17
_chem_comp.pdbx_modified_date 2018-02-16
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 568.871
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code C7Z
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5OY0
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
C7Z C6 C1 C 0 1 N N N 219.560 -96.133 70.609 -11.428 -0.257 0.075 C6 C7Z 1
C7Z C17 C2 C 0 1 N N N 217.664 -97.480 71.214 -12.339 -2.158 -1.219 C17 C7Z 2
C7Z C4 C3 C 0 1 N N N 219.543 -93.664 70.949 -13.022 1.368 1.088 C4 C7Z 3
C7Z C3 C4 C 0 1 N N S 218.035 -93.705 70.749 -13.763 1.268 -0.247 C3 C7Z 4
C7Z O3 O1 O 0 1 N N N 217.446 -92.624 71.478 -15.098 1.752 -0.091 O3 C7Z 5
C7Z C2 C5 C 0 1 N N N 217.483 -95.002 71.300 -13.796 -0.204 -0.677 C2 C7Z 6
C7Z C1 C6 C 0 1 N N N 218.060 -96.181 70.540 -12.372 -0.640 -1.027 C1 C7Z 7
C7Z C5 C7 C 0 1 N N N 220.242 -94.998 70.805 -11.714 0.635 1.009 C5 C7Z 8
C7Z C18 C8 C 0 1 N N N 221.736 -94.948 70.942 -10.669 0.931 2.053 C18 C7Z 9
C7Z C16 C9 C 0 1 N N N 217.571 -96.189 69.099 -11.940 0.044 -2.326 C16 C7Z 10
C7Z O23 O2 O 0 1 N N N 239.597 -112.244 68.351 15.089 -1.762 -0.173 O23 C7Z 11
C7Z C26 C10 C 0 1 N N N 238.225 -109.218 68.074 11.431 0.257 0.096 C26 C7Z 12
C7Z C7 C11 C 0 1 N N N 220.242 -97.434 70.475 -10.160 -0.890 0.121 C7 C7Z 13
C7Z C8 C12 C 0 1 N N N 221.068 -97.854 69.528 -9.026 -0.141 0.108 C8 C7Z 14
C7Z C9 C13 C 0 1 N N N 221.620 -99.213 69.615 -7.769 -0.770 0.129 C9 C7Z 15
C7Z C19 C14 C 0 1 N N N 220.842 -100.322 70.261 -7.679 -2.274 0.164 C19 C7Z 16
C7Z C10 C15 C 0 1 N N N 222.828 -99.429 69.097 -6.629 -0.018 0.117 C10 C7Z 17
C7Z C11 C16 C 0 1 N N N 223.586 -100.667 69.048 -5.376 -0.645 0.137 C11 C7Z 18
C7Z C12 C17 C 0 1 N N N 224.903 -100.636 68.918 -4.227 0.113 0.125 C12 C7Z 19
C7Z C13 C18 C 0 1 N N N 225.668 -101.886 68.853 -2.975 -0.513 0.145 C13 C7Z 20
C7Z C20 C19 C 0 1 N N N 225.025 -103.197 69.186 -2.885 -2.017 0.181 C20 C7Z 21
C7Z C14 C20 C 0 1 N N N 226.947 -101.838 68.479 -1.824 0.246 0.133 C14 C7Z 22
C7Z C15 C21 C 0 1 N N N 227.847 -102.969 68.340 -0.573 -0.379 0.153 C15 C7Z 23
C7Z C35 C22 C 0 1 N N N 229.125 -102.827 68.027 0.578 0.380 0.141 C35 C7Z 24
C7Z C34 C23 C 0 1 N N N 229.959 -104.009 67.880 1.829 -0.246 0.161 C34 C7Z 25
C7Z C33 C24 C 0 1 N N N 231.277 -104.064 68.072 2.979 0.513 0.149 C33 C7Z 26
C7Z C40 C25 C 0 1 N N N 232.016 -102.830 68.496 2.889 2.017 0.113 C40 C7Z 27
C7Z C32 C26 C 0 1 N N N 232.010 -105.325 67.873 4.231 -0.112 0.169 C32 C7Z 28
C7Z C31 C27 C 0 1 N N N 233.184 -105.451 68.476 5.380 0.646 0.157 C31 C7Z 29
C7Z C30 C28 C 0 1 N N N 233.999 -106.650 68.333 6.634 0.019 0.177 C30 C7Z 30
C7Z C29 C29 C 0 1 N N N 235.329 -106.663 68.475 7.773 0.771 0.165 C29 C7Z 31
C7Z C39 C30 C 0 1 N N N 236.037 -105.384 68.810 7.683 2.275 0.129 C39 C7Z 32
C7Z C28 C31 C 0 1 N N N 236.103 -107.906 68.310 9.030 0.142 0.185 C28 C7Z 33
C7Z C27 C32 C 0 1 N N N 237.438 -107.966 68.251 10.165 0.891 0.173 C27 C7Z 34
C7Z C21 C33 C 0 1 N N N 238.538 -109.550 66.614 12.348 0.644 -1.028 C21 C7Z 35
C7Z C36 C34 C 0 1 N N N 237.393 -109.215 65.659 11.880 -0.030 -2.319 C36 C7Z 36
C7Z C37 C35 C 0 1 N N N 239.711 -108.659 66.228 12.318 2.163 -1.208 C37 C7Z 37
C7Z C22 C36 C 0 1 N N N 238.950 -111.006 66.384 13.779 0.201 -0.715 C22 C7Z 38
C7Z C23 C37 C 0 1 N N S 238.512 -112.012 67.446 13.752 -1.273 -0.292 C23 C7Z 39
C7Z C24 C38 C 0 1 N N N 237.320 -111.474 68.218 13.044 -1.377 1.061 C24 C7Z 40
C7Z C25 C39 C 0 1 N N N 237.761 -110.217 68.842 11.739 -0.636 1.021 C25 C7Z 41
C7Z C38 C40 C 0 1 N N N 237.703 -110.134 70.341 10.721 -0.931 2.092 C38 C7Z 42
C7Z H1 H1 H 0 1 N N N 218.017 -97.476 72.256 -12.673 -2.647 -0.303 H1 C7Z 43
C7Z H2 H2 H 0 1 N N N 216.569 -97.582 71.198 -12.999 -2.435 -2.040 H2 C7Z 44
C7Z H3 H3 H 0 1 N N N 218.119 -98.325 70.677 -11.321 -2.473 -1.448 H3 C7Z 45
C7Z H4 H4 H 0 1 N N N 219.968 -92.974 70.205 -12.835 2.416 1.320 H4 C7Z 46
C7Z H5 H5 H 0 1 N N N 219.743 -93.281 71.961 -13.635 0.928 1.874 H5 C7Z 47
C7Z H6 H6 H 0 1 N N N 217.802 -93.628 69.677 -13.241 1.858 -1.000 H6 C7Z 48
C7Z H7 H7 H 0 1 N N N 216.503 -92.639 71.361 -15.151 2.674 0.194 H7 C7Z 49
C7Z H8 H8 H 0 1 N N N 216.388 -95.004 71.197 -14.175 -0.816 0.141 H8 C7Z 50
C7Z H9 H9 H 0 1 N N N 217.751 -95.089 72.363 -14.441 -0.317 -1.548 H9 C7Z 51
C7Z H10 H10 H 0 1 N N N 222.056 -93.907 71.095 -9.977 1.683 1.672 H10 C7Z 52
C7Z H11 H11 H 0 1 N N N 222.046 -95.557 71.804 -11.152 1.307 2.955 H11 C7Z 53
C7Z H12 H12 H 0 1 N N N 222.201 -95.344 70.027 -10.120 0.019 2.288 H12 C7Z 54
C7Z H13 H13 H 0 1 N N N 216.472 -96.224 69.084 -10.930 -0.272 -2.585 H13 C7Z 55
C7Z H14 H14 H 0 1 N N N 217.915 -95.277 68.590 -12.624 -0.233 -3.128 H14 C7Z 56
C7Z H15 H15 H 0 1 N N N 217.973 -97.072 68.580 -11.958 1.126 -2.190 H15 C7Z 57
C7Z H16 H16 H 0 1 N N N 239.329 -112.870 69.014 15.146 -2.691 0.093 H16 C7Z 58
C7Z H18 H18 H 0 1 N N N 220.039 -98.146 71.261 -10.096 -1.967 0.165 H18 C7Z 59
C7Z H19 H19 H 0 1 N N N 221.332 -97.207 68.704 -9.090 0.936 0.083 H19 C7Z 60
C7Z H20 H20 H 0 1 N N N 219.878 -99.933 70.620 -7.653 -2.661 -0.854 H20 C7Z 61
C7Z H21 H21 H 0 1 N N N 220.664 -101.121 69.526 -6.772 -2.572 0.690 H21 C7Z 62
C7Z H22 H22 H 0 1 N N N 221.414 -100.725 71.110 -8.548 -2.678 0.684 H22 C7Z 63
C7Z H23 H23 H 0 1 N N N 223.308 -98.569 68.654 -6.694 1.059 0.091 H23 C7Z 64
C7Z H24 H24 H 0 1 N N N 223.074 -101.615 69.118 -5.312 -1.723 0.163 H24 C7Z 65
C7Z H25 H25 H 0 1 N N N 225.416 -99.687 68.860 -4.291 1.191 0.099 H25 C7Z 66
C7Z H26 H26 H 0 1 N N N 223.975 -103.030 69.470 -2.859 -2.403 -0.838 H26 C7Z 67
C7Z H27 H27 H 0 1 N N N 225.066 -103.859 68.308 -1.977 -2.314 0.706 H27 C7Z 68
C7Z H28 H28 H 0 1 N N N 225.561 -103.666 70.024 -3.754 -2.420 0.700 H28 C7Z 69
C7Z H29 H29 H 0 1 N N N 227.353 -100.862 68.258 -1.889 1.324 0.107 H29 C7Z 70
C7Z H30 H30 H 0 1 N N N 227.459 -103.964 68.498 -0.509 -1.457 0.179 H30 C7Z 71
C7Z H31 H31 H 0 1 N N N 229.545 -101.842 67.882 0.513 1.458 0.115 H31 C7Z 72
C7Z H32 H32 H 0 1 N N N 229.466 -104.925 67.589 1.893 -1.324 0.187 H32 C7Z 73
C7Z H33 H33 H 0 1 N N N 231.308 -101.993 68.593 2.863 2.404 1.132 H33 C7Z 74
C7Z H34 H34 H 0 1 N N N 232.505 -103.010 69.464 3.759 2.421 -0.406 H34 C7Z 75
C7Z H35 H35 H 0 1 N N N 232.777 -102.581 67.741 1.982 2.315 -0.412 H35 C7Z 76
C7Z H36 H36 H 0 1 N N N 231.607 -106.117 67.259 4.295 -1.190 0.195 H36 C7Z 77
C7Z H37 H37 H 0 1 N N N 233.547 -104.641 69.091 5.316 1.724 0.131 H37 C7Z 78
C7Z H38 H38 H 0 1 N N N 233.502 -107.580 68.099 6.698 -1.059 0.203 H38 C7Z 79
C7Z H39 H39 H 0 1 N N N 235.303 -104.569 68.893 7.657 2.661 1.148 H39 C7Z 80
C7Z H40 H40 H 0 1 N N N 236.568 -105.499 69.767 8.552 2.678 -0.390 H40 C7Z 81
C7Z H41 H41 H 0 1 N N N 236.760 -105.146 68.016 6.776 2.572 -0.396 H41 C7Z 82
C7Z H42 H42 H 0 1 N N N 235.554 -108.833 68.231 9.094 -0.936 0.211 H42 C7Z 83
C7Z H43 H43 H 0 1 N N N 237.985 -107.039 68.338 10.102 1.968 0.222 H43 C7Z 84
C7Z H44 H44 H 0 1 N N N 236.519 -109.838 65.901 10.865 0.293 -2.550 H44 C7Z 85
C7Z H45 H45 H 0 1 N N N 237.127 -108.153 65.764 12.545 0.249 -3.136 H45 C7Z 86
C7Z H46 H46 H 0 1 N N N 237.709 -109.413 64.624 11.896 -1.112 -2.191 H46 C7Z 87
C7Z H47 H47 H 0 1 N N N 240.563 -108.866 66.892 12.678 2.644 -0.299 H47 C7Z 88
C7Z H48 H48 H 0 1 N N N 240.000 -108.864 65.186 12.958 2.442 -2.045 H48 C7Z 89
C7Z H49 H49 H 0 1 N N N 239.417 -107.603 66.326 11.296 2.484 -1.409 H49 C7Z 90
C7Z H50 H50 H 0 1 N N N 238.522 -111.327 65.423 14.400 0.316 -1.603 H50 C7Z 91
C7Z H51 H51 H 0 1 N N N 240.048 -111.038 66.326 14.181 0.808 0.097 H51 C7Z 92
C7Z H52 H52 H 0 1 N N N 238.224 -112.951 66.950 13.210 -1.857 -1.035 H52 C7Z 93
C7Z H53 H53 H 0 1 N N N 236.479 -111.285 67.535 12.859 -2.426 1.291 H53 C7Z 94
C7Z H54 H54 H 0 1 N N N 237.011 -112.194 68.990 13.678 -0.945 1.835 H54 C7Z 95
C7Z H56 H56 H 0 1 N N N 237.288 -111.069 70.745 10.016 -1.679 1.728 H56 C7Z 96
C7Z H57 H57 H 0 1 N N N 238.717 -109.981 70.739 11.227 -1.310 2.980 H57 C7Z 97
C7Z H58 H58 H 0 1 N N N 237.062 -109.291 70.637 10.183 -0.017 2.343 H58 C7Z 98
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
C7Z C36 C21 SING N N 1
C7Z C37 C21 SING N N 2
C7Z C22 C21 SING N N 3
C7Z C22 C23 SING N N 4
C7Z C21 C26 SING N N 5
C7Z C23 C24 SING N N 6
C7Z C23 O23 SING N N 7
C7Z C32 C33 SING N N 8
C7Z C32 C31 DOUB N E 9
C7Z C34 C35 SING N N 10
C7Z C34 C33 DOUB N E 11
C7Z C35 C15 DOUB N E 12
C7Z C33 C40 SING N N 13
C7Z C26 C27 SING N N 14
C7Z C26 C25 DOUB N N 15
C7Z C24 C25 SING N N 16
C7Z C27 C28 DOUB N E 17
C7Z C28 C29 SING N N 18
C7Z C30 C29 DOUB N E 19
C7Z C30 C31 SING N N 20
C7Z C15 C14 SING N N 21
C7Z C29 C39 SING N N 22
C7Z C14 C13 DOUB N E 23
C7Z C25 C38 SING N N 24
C7Z C13 C12 SING N N 25
C7Z C13 C20 SING N N 26
C7Z C12 C11 DOUB N E 27
C7Z C11 C10 SING N N 28
C7Z C10 C9 DOUB N E 29
C7Z C16 C1 SING N N 30
C7Z C8 C9 SING N N 31
C7Z C8 C7 DOUB N E 32
C7Z C9 C19 SING N N 33
C7Z C7 C6 SING N N 34
C7Z C1 C6 SING N N 35
C7Z C1 C17 SING N N 36
C7Z C1 C2 SING N N 37
C7Z C6 C5 DOUB N N 38
C7Z C3 C4 SING N N 39
C7Z C3 C2 SING N N 40
C7Z C3 O3 SING N N 41
C7Z C5 C18 SING N N 42
C7Z C5 C4 SING N N 43
C7Z C17 H1 SING N N 44
C7Z C17 H2 SING N N 45
C7Z C17 H3 SING N N 46
C7Z C4 H4 SING N N 47
C7Z C4 H5 SING N N 48
C7Z C3 H6 SING N N 49
C7Z O3 H7 SING N N 50
C7Z C2 H8 SING N N 51
C7Z C2 H9 SING N N 52
C7Z C18 H10 SING N N 53
C7Z C18 H11 SING N N 54
C7Z C18 H12 SING N N 55
C7Z C16 H13 SING N N 56
C7Z C16 H14 SING N N 57
C7Z C16 H15 SING N N 58
C7Z O23 H16 SING N N 59
C7Z C7 H18 SING N N 60
C7Z C8 H19 SING N N 61
C7Z C19 H20 SING N N 62
C7Z C19 H21 SING N N 63
C7Z C19 H22 SING N N 64
C7Z C10 H23 SING N N 65
C7Z C11 H24 SING N N 66
C7Z C12 H25 SING N N 67
C7Z C20 H26 SING N N 68
C7Z C20 H27 SING N N 69
C7Z C20 H28 SING N N 70
C7Z C14 H29 SING N N 71
C7Z C15 H30 SING N N 72
C7Z C35 H31 SING N N 73
C7Z C34 H32 SING N N 74
C7Z C40 H33 SING N N 75
C7Z C40 H34 SING N N 76
C7Z C40 H35 SING N N 77
C7Z C32 H36 SING N N 78
C7Z C31 H37 SING N N 79
C7Z C30 H38 SING N N 80
C7Z C39 H39 SING N N 81
C7Z C39 H40 SING N N 82
C7Z C39 H41 SING N N 83
C7Z C28 H42 SING N N 84
C7Z C27 H43 SING N N 85
C7Z C36 H44 SING N N 86
C7Z C36 H45 SING N N 87
C7Z C36 H46 SING N N 88
C7Z C37 H47 SING N N 89
C7Z C37 H48 SING N N 90
C7Z C37 H49 SING N N 91
C7Z C22 H50 SING N N 92
C7Z C22 H51 SING N N 93
C7Z C23 H52 SING N N 94
C7Z C24 H53 SING N N 95
C7Z C24 H54 SING N N 96
C7Z C38 H56 SING N N 97
C7Z C38 H57 SING N N 98
C7Z C38 H58 SING N N 99
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
C7Z InChI InChI 1.03
;InChI=1S/C40H56O2/c1-29(17-13-19-31(3)21-23-37-33(5)25-35(41)27-39(37,7)8)15-11-12-16-30(2)18-14-20-32(4)22-24-38-34(6)26-36(42)28-40(38,9)10/h11-24,35-36,41-42H,25-28H2,1-10H3/b12-11+,17-13+,18-14+,23-21+,24-22+,29-15+,30-16+,31-19+,32-20+/t35-,36-/m0/s1
;
C7Z InChIKey InChI 1.03 JKQXZKUSFCKOGQ-ANDPMPNWSA-N
C7Z SMILES_CANONICAL CACTVS 3.385 "CC(=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C1=C(C)C[C@H](O)CC1(C)C)\C=C\C=C(C)\C=C\C2=C(C)C[C@H](O)CC2(C)C"
C7Z SMILES CACTVS 3.385 "CC(=CC=CC=C(C)C=CC=C(C)C=CC1=C(C)C[CH](O)CC1(C)C)C=CC=C(C)C=CC2=C(C)C[CH](O)CC2(C)C"
C7Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC1=C(C(C[C@H](C1)O)(C)C)/C=C/C(=C/C=C/C(=C/C=C/C=C(/C=C/C=C(/C=C/C2=C(C[C@@H](CC2(C)C)O)C)\C)\C)/C)/C"
C7Z SMILES "OpenEye OEToolkits" 2.0.6 "CC1=C(C(CC(C1)O)(C)C)C=CC(=CC=CC(=CC=CC=C(C)C=CC=C(C)C=CC2=C(CC(CC2(C)C)O)C)C)C"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
C7Z "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6
"(1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
C7Z "Create component" 2017-11-17 EBI
C7Z "Initial release" 2018-02-21 RCSB
#