data_C8S # _chem_comp.id C8S _chem_comp.name "(2S)-2-amino-1-[(1S,3S,5S)-3-(aminomethyl)-2-azabicyclo[3.1.0]hexan-2-yl]-2-[(1r,3R,5S,7S)-3,5-dihydroxytricyclo[3.3.1.1~3,7~]decan-1-yl]ethan-1-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H29 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-09-19 _chem_comp.pdbx_modified_date 2017-09-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 335.441 _chem_comp.one_letter_code ? _chem_comp.three_letter_code C8S _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6B1O _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal C8S C2 C1 C 0 1 N N N 5.363 2.152 33.005 -2.066 0.783 -1.299 C2 C8S 1 C8S C3 C2 C 0 1 N N R 6.810 2.608 33.316 -3.269 0.859 -0.358 C3 C8S 2 C8S C4 C3 C 0 1 N N N 5.176 0.690 33.486 -0.906 0.082 -0.589 C4 C8S 3 C8S C5 C4 C 0 1 N N N 7.811 1.710 32.557 -2.887 1.648 0.896 C5 C8S 4 C8S C6 C5 C 0 1 N N N 6.245 -0.202 32.774 -0.524 0.871 0.665 C6 C8S 5 C8S C7 C6 C 0 1 N N N 7.682 0.279 33.062 -1.727 0.947 1.606 C7 C8S 6 C8S C8 C7 C 0 1 N N N 5.516 0.648 35.010 -1.332 -1.333 -0.191 C8 C8S 7 C8S N1 N1 N 0 1 N N N 3.356 -0.036 31.832 -0.023 -0.871 -2.665 N1 C8S 8 C8S C9 C8 C 0 1 N N S 6.934 1.186 35.333 -2.536 -1.257 0.750 C9 C8S 9 C8S C10 C9 C 0 1 N N N 7.065 2.649 34.859 -3.695 -0.555 0.040 C10 C8S 10 C8S C11 C10 C 0 1 N N N 7.920 0.269 34.586 -2.154 -0.468 2.004 C11 C8S 11 C8S C12 C11 C 0 1 N N S 3.724 0.096 33.273 0.298 0.006 -1.531 C12 C8S 12 C8S O13 O1 O 0 1 N N N 7.031 3.889 32.769 -4.352 1.514 -1.021 O13 C8S 13 C8S C14 C12 C 0 1 N N N 2.659 0.956 33.964 1.484 -0.550 -0.786 C14 C8S 14 C8S C15 C13 C 0 1 N N S 1.068 1.243 35.811 3.793 -0.140 0.172 C15 C8S 15 C8S N16 N2 N 0 1 N N N 2.190 0.578 35.192 2.512 0.257 -0.457 N16 C8S 16 C8S C17 C14 C 0 1 N N N 0.345 0.275 36.696 4.071 1.013 1.169 C17 C8S 17 C8S C18 C15 C 0 1 N N S 2.546 -0.614 35.944 2.592 1.718 -0.650 C18 C8S 18 C8S C19 C16 C 0 1 N N S 1.418 -0.740 36.990 3.581 2.260 0.399 C19 C8S 19 C8S C20 C17 C 0 1 N N N 2.852 -0.556 37.424 2.098 2.623 0.481 C20 C8S 20 C8S O21 O2 O 0 1 N N N 2.250 1.970 33.421 1.514 -1.724 -0.482 O21 C8S 21 C8S O22 O3 O 0 1 N N N 7.186 1.102 36.759 -2.934 -2.578 1.122 O22 C8S 22 C8S C23 C18 C 0 1 N N N 1.395 2.493 36.757 3.640 -1.470 0.914 C23 C8S 23 C8S N24 N3 N 0 1 N N N 2.611 3.066 36.565 3.543 -2.565 -0.060 N24 C8S 24 C8S H1 H1 H 0 1 N N N 4.650 2.806 33.529 -2.338 0.221 -2.193 H1 C8S 25 C8S H2 H2 H 0 1 N N N 5.184 2.209 31.921 -1.762 1.791 -1.583 H2 C8S 26 C8S H3 H3 H 0 1 N N N 8.835 2.071 32.732 -2.583 2.656 0.613 H3 C8S 27 C8S H4 H4 H 0 1 N N N 7.590 1.741 31.480 -3.744 1.702 1.567 H4 C8S 28 C8S H5 H5 H 0 1 N N N 6.070 -0.168 31.689 0.303 0.371 1.171 H5 C8S 29 C8S H6 H6 H 0 1 N N N 6.139 -1.237 33.131 -0.220 1.879 0.381 H6 C8S 30 C8S H7 H7 H 0 1 N N N 8.410 -0.374 32.559 -1.455 1.509 2.499 H7 C8S 31 C8S H8 H8 H 0 1 N N N 4.778 1.260 35.550 -1.604 -1.895 -1.084 H8 C8S 32 C8S H9 H9 H 0 1 N N N 5.450 -0.395 35.355 -0.506 -1.832 0.315 H9 C8S 33 C8S H10 H10 H 0 1 N N N 2.433 -0.414 31.756 -0.246 -1.803 -2.350 H10 C8S 34 C8S H11 H11 H 0 1 N N N 3.384 0.864 31.397 -0.774 -0.486 -3.218 H11 C8S 35 C8S H13 H13 H 0 1 N N N 8.073 3.034 35.073 -4.553 -0.502 0.711 H13 C8S 36 C8S H14 H14 H 0 1 N N N 6.317 3.284 35.356 -3.968 -1.118 -0.853 H14 C8S 37 C8S H15 H15 H 0 1 N N N 7.798 -0.759 34.957 -1.327 -0.967 2.510 H15 C8S 38 C8S H16 H16 H 0 1 N N N 8.945 0.613 34.787 -3.011 -0.414 2.675 H16 C8S 39 C8S H17 H17 H 0 1 N N N 3.706 -0.903 33.732 0.535 1.004 -1.898 H17 C8S 40 C8S H18 H18 H 0 1 N N N 6.449 4.515 33.183 -5.151 1.598 -0.482 H18 C8S 41 C8S H19 H19 H 0 1 N N N 0.375 1.592 35.031 4.586 -0.205 -0.572 H19 C8S 42 C8S H20 H20 H 0 1 N N N -0.008 0.762 37.617 3.499 0.876 2.087 H20 C8S 43 C8S H21 H21 H 0 1 N N N -0.508 -0.184 36.174 5.137 1.087 1.385 H21 C8S 44 C8S H22 H22 H 0 1 N N N 2.829 -1.526 35.397 2.596 2.088 -1.675 H22 C8S 45 C8S H23 H23 H 0 1 N N N 1.043 -1.767 37.108 4.319 3.023 0.151 H23 C8S 46 C8S H24 H24 H 0 1 N N N 3.388 -1.388 37.904 1.815 3.643 0.221 H24 C8S 47 C8S H25 H25 H 0 1 N N N 3.167 0.394 37.880 1.510 2.161 1.275 H25 C8S 48 C8S H26 H26 H 0 1 N N N 6.579 1.667 37.222 -3.694 -2.606 1.720 H26 C8S 49 C8S H27 H27 H 0 1 N N N 0.627 3.261 36.583 4.507 -1.630 1.555 H27 C8S 50 C8S H28 H28 H 0 1 N N N 1.342 2.151 37.801 2.737 -1.445 1.523 H28 C8S 51 C8S H29 H29 H 0 1 N N N 2.722 3.833 37.197 4.405 -2.671 -0.573 H29 C8S 52 C8S H30 H30 H 0 1 N N N 3.328 2.389 36.732 3.283 -3.429 0.392 H30 C8S 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C8S N1 C12 SING N N 1 C8S C5 C7 SING N N 2 C8S C5 C3 SING N N 3 C8S O13 C3 SING N N 4 C8S C6 C7 SING N N 5 C8S C6 C4 SING N N 6 C8S C2 C3 SING N N 7 C8S C2 C4 SING N N 8 C8S C7 C11 SING N N 9 C8S C12 C4 SING N N 10 C8S C12 C14 SING N N 11 C8S C3 C10 SING N N 12 C8S O21 C14 DOUB N N 13 C8S C4 C8 SING N N 14 C8S C14 N16 SING N N 15 C8S C11 C9 SING N N 16 C8S C10 C9 SING N N 17 C8S C8 C9 SING N N 18 C8S N16 C15 SING N N 19 C8S N16 C18 SING N N 20 C8S C9 O22 SING N N 21 C8S C15 C17 SING N N 22 C8S C15 C23 SING N N 23 C8S C18 C19 SING N N 24 C8S C18 C20 SING N N 25 C8S N24 C23 SING N N 26 C8S C17 C19 SING N N 27 C8S C19 C20 SING N N 28 C8S C2 H1 SING N N 29 C8S C2 H2 SING N N 30 C8S C5 H3 SING N N 31 C8S C5 H4 SING N N 32 C8S C6 H5 SING N N 33 C8S C6 H6 SING N N 34 C8S C7 H7 SING N N 35 C8S C8 H8 SING N N 36 C8S C8 H9 SING N N 37 C8S N1 H10 SING N N 38 C8S N1 H11 SING N N 39 C8S C10 H13 SING N N 40 C8S C10 H14 SING N N 41 C8S C11 H15 SING N N 42 C8S C11 H16 SING N N 43 C8S C12 H17 SING N N 44 C8S O13 H18 SING N N 45 C8S C15 H19 SING N N 46 C8S C17 H20 SING N N 47 C8S C17 H21 SING N N 48 C8S C18 H22 SING N N 49 C8S C19 H23 SING N N 50 C8S C20 H24 SING N N 51 C8S C20 H25 SING N N 52 C8S O22 H26 SING N N 53 C8S C23 H27 SING N N 54 C8S C23 H28 SING N N 55 C8S N24 H29 SING N N 56 C8S N24 H30 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor C8S SMILES ACDLabs 12.01 "C1C2(CC3(CC1(CC(C2)C3)C(N)C(N4C(CC5C4C5)CN)=O)O)O" C8S InChI InChI 1.03 "InChI=1S/C18H29N3O3/c19-6-12-1-11-2-13(11)21(12)15(22)14(20)16-3-10-4-17(23,7-16)9-18(24,5-10)8-16/h10-14,23-24H,1-9,19-20H2/t10-,11-,12+,13+,14-,16-,17+,18-/m1/s1" C8S InChIKey InChI 1.03 NFCLGRKAEZJOPE-KAARGAEXSA-N C8S SMILES_CANONICAL CACTVS 3.385 "NC[C@@H]1C[C@@H]2C[C@@H]2N1C(=O)[C@@H](N)C34CC5C[C@](O)(C[C@](O)(C5)C3)C4" C8S SMILES CACTVS 3.385 "NC[CH]1C[CH]2C[CH]2N1C(=O)[CH](N)C34CC5C[C](O)(C[C](O)(C5)C3)C4" C8S SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C1[C@@H]2C[C@@H]2N([C@@H]1CN)C(=O)[C@H](C34CC5C[C@](C3)(C[C@@](C5)(C4)O)O)N" C8S SMILES "OpenEye OEToolkits" 2.0.6 "C1C2CC2N(C1CN)C(=O)C(C34CC5CC(C3)(CC(C5)(C4)O)O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier C8S "SYSTEMATIC NAME" ACDLabs 12.01 "(2S)-2-amino-1-[(1S,3S,5S)-3-(aminomethyl)-2-azabicyclo[3.1.0]hexan-2-yl]-2-[(1r,3R,5S,7S)-3,5-dihydroxytricyclo[3.3.1.1~3,7~]decan-1-yl]ethan-1-one" C8S "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-1-[(1~{S},3~{S},5~{S})-3-(aminomethyl)-2-azabicyclo[3.1.0]hexan-2-yl]-2-azanyl-2-[(3~{S},5~{R})-3,5-bis(oxidanyl)-1-adamantyl]ethanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site C8S "Create component" 2017-09-19 RCSB C8S "Initial release" 2017-09-27 RCSB #