data_CAG
#
_chem_comp.id CAG
_chem_comp.name
;GUANOSINE 5'-TRIPHOSPHATE P3-[1-(2-NITROPHENYL)ETHYL ESTER]
;
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C18 H23 N6 O16 P3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 672.327
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code CAG
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1PLJ,1GNR
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CAG PG PG P 0 1 N N S 5.601 32.097 22.169 -0.486 0.564 4.738 PG CAG 1
CAG O1G O1G O 0 1 N N N 4.765 32.737 21.159 -1.913 0.308 5.033 O1G CAG 2
CAG O2G O2G O 0 1 N N N 5.302 30.721 22.577 0.306 -0.835 4.667 O2G CAG 3
CAG O3G O3G O 0 1 N N N 5.719 33.048 23.455 0.146 1.480 5.901 O3G CAG 4
CAG PB PB P 0 1 N N S 7.466 32.074 20.092 -1.007 0.357 2.215 PB CAG 5
CAG O1B O1B O 0 1 N N N 7.585 30.621 19.813 -0.270 -0.926 2.188 O1B CAG 6
CAG O2B O2B O 0 1 N N N 6.606 32.903 19.223 -2.551 0.083 2.578 O2B CAG 7
CAG O3B O3B O 0 1 N N N 7.131 32.229 21.676 -0.358 1.325 3.325 O3B CAG 8
CAG PA PA P 0 1 N N S 9.308 34.189 19.531 -1.576 0.043 -0.287 PA CAG 9
CAG O1A O1A O 0 1 N N N 9.261 34.278 18.051 -0.831 -1.235 -0.275 O1A CAG 10
CAG O2A O2A O 0 1 N N N 8.583 35.189 20.337 -3.110 -0.226 0.118 O2A CAG 11
CAG O3A O3A O 0 1 N N N 8.953 32.699 20.078 -0.912 1.060 0.769 O3A CAG 12
CAG "O5'" O5* O 0 1 N N N 10.870 34.205 19.907 -1.515 0.685 -1.761 "O5'" CAG 13
CAG C5B C5* C 0 1 N N N 11.257 33.802 21.216 -2.116 -0.259 -2.649 C5B CAG 14
CAG C4B C4* C 0 1 N N R 12.667 34.245 21.568 -2.090 0.292 -4.076 C4B CAG 15
CAG "O4'" O4* O 0 1 N N N 13.652 33.427 20.928 -0.731 0.492 -4.498 "O4'" CAG 16
CAG C3B C3* C 0 1 N N S 12.877 35.694 21.137 -2.729 -0.723 -5.042 C3B CAG 17
CAG "O3'" O3* O 0 1 N N N 13.690 36.404 22.084 -3.864 -0.153 -5.698 "O3'" CAG 18
CAG C2B C2* C 0 1 N N R 13.532 35.497 19.780 -1.605 -1.025 -6.067 C2B CAG 19
CAG "O2'" O2* O 0 1 N N N 14.336 36.559 19.263 -2.133 -1.106 -7.393 "O2'" CAG 20
CAG C1B C1* C 0 1 N N R 14.370 34.270 20.038 -0.683 0.211 -5.913 C1B CAG 21
CAG N9 N9 N 0 1 Y N N 14.542 33.600 18.762 0.684 -0.104 -6.331 N9 CAG 22
CAG C8 C8 C 0 1 Y N N 13.622 33.177 17.841 1.655 -0.666 -5.555 C8 CAG 23
CAG N7 N7 N 0 1 Y N N 14.151 32.717 16.741 2.747 -0.806 -6.248 N7 CAG 24
CAG C5 C5 C 0 1 Y N N 15.520 32.760 17.005 2.543 -0.345 -7.506 C5 CAG 25
CAG C6 C6 C 0 1 Y N N 16.612 32.331 16.219 3.351 -0.248 -8.663 C6 CAG 26
CAG O6 O6 O 0 1 N N N 16.612 31.627 15.210 4.508 -0.631 -8.651 O6 CAG 27
CAG N1 N1 N 0 1 Y N N 17.806 32.669 16.819 2.808 0.280 -9.782 N1 CAG 28
CAG C2 C2 C 0 1 Y N N 17.947 33.185 18.081 1.513 0.704 -9.785 C2 CAG 29
CAG N2 N2 N 0 1 N N N 19.185 33.401 18.486 0.988 1.237 -10.935 N2 CAG 30
CAG N3 N3 N 0 1 Y N N 16.935 33.480 18.880 0.752 0.619 -8.716 N3 CAG 31
CAG C4 C4 C 0 1 Y N N 15.754 33.274 18.255 1.219 0.103 -7.574 C4 CAG 32
CAG "C'" "C'" C 0 1 N N R 5.821 32.633 24.814 0.003 0.753 7.123 "C'" CAG 33
CAG "CM'" "CM'" C 0 1 N N N 5.279 33.765 25.660 -0.843 1.566 8.104 "CM'" CAG 34
CAG "C1'" "C1'" C 0 1 Y N N 7.183 32.238 25.322 1.364 0.504 7.722 "C1'" CAG 35
CAG "C2'" "C2'" C 0 1 Y N N 8.316 32.987 25.202 1.568 -0.591 8.577 "C2'" CAG 36
CAG "N2'" "N2'" N 1 1 N N N 8.384 34.218 24.560 0.552 -1.426 8.862 "N2'" CAG 37
CAG "O'L" "1O2'" O -1 1 N N N 7.411 34.622 23.643 0.775 -2.604 9.077 "O'L" CAG 38
CAG "O'M" "2O2'" O 0 1 N N N 9.521 35.015 24.758 -0.588 -1.004 8.905 "O'M" CAG 39
CAG "C3'" "C3'" C 0 1 Y N N 9.451 32.616 25.837 2.843 -0.815 9.125 "C3'" CAG 40
CAG "C4'" "C4'" C 0 1 Y N N 9.464 31.566 26.688 3.875 0.045 8.827 "C4'" CAG 41
CAG "C5'" "C5'" C 0 1 Y N N 8.344 30.828 26.837 3.661 1.126 7.986 "C5'" CAG 42
CAG "C6'" "C6'" C 0 1 Y N N 7.226 31.161 26.147 2.410 1.353 7.437 "C6'" CAG 43
CAG HOG2 2HOG H 0 0 N N N 5.846 30.304 23.234 1.229 -0.624 4.473 HOG2 CAG 44
CAG HOB2 2HOB H 0 0 N N N 6.529 33.833 19.401 -2.993 0.943 2.585 HOB2 CAG 45
CAG HOA2 2HOA H 0 0 N N N 8.613 35.132 21.284 -3.559 0.630 0.098 HOA2 CAG 46
CAG "H5'1" 1H5* H 0 0 N N N 10.523 34.155 21.977 -1.560 -1.196 -2.612 "H5'1" CAG 47
CAG "H5'2" 2H5* H 0 0 N N N 11.137 32.701 21.348 -3.148 -0.436 -2.346 "H5'2" CAG 48
CAG H4B H4* H 0 1 N N N 12.784 34.145 22.672 -2.633 1.236 -4.117 H4B CAG 49
CAG H3B H3* H 0 1 N N N 11.956 36.320 21.084 -3.013 -1.630 -4.509 H3B CAG 50
CAG HO3 HO3 H 0 1 N N N 13.820 37.305 21.815 -4.181 -0.813 -6.330 HO3 CAG 51
CAG "H2'" H2* H 0 1 N N N 12.753 35.429 18.984 -1.074 -1.940 -5.806 "H2'" CAG 52
CAG HO2 HO2 H 0 1 N N N 14.745 36.435 18.414 -2.694 -1.893 -7.422 HO2 CAG 53
CAG "H1'" H1* H 0 1 N N N 15.360 34.523 20.483 -1.073 1.053 -6.485 "H1'" CAG 54
CAG H8 H8 H 0 1 N N N 12.527 33.204 17.976 1.536 -0.951 -4.520 H8 CAG 55
CAG H1 H1 H 0 1 N N N 18.660 32.524 16.281 3.342 0.357 -10.588 H1 CAG 56
CAG H21 1H2 H 0 1 N N N 19.289 33.785 19.425 0.068 1.544 -10.952 H21 CAG 57
CAG H22 2H2 H 0 1 N N N 19.669 33.995 17.813 1.538 1.307 -11.732 H22 CAG 58
CAG "H'" "H'" H 0 1 N N N 5.241 31.683 24.884 -0.485 -0.199 6.924 "H'" CAG 59
CAG HCM1 1HCM H 0 0 N N N 5.358 33.440 26.723 -0.354 2.520 8.303 HCM1 CAG 60
CAG HCM2 2HCM H 0 0 N N N 5.779 34.741 25.460 -1.827 1.747 7.671 HCM2 CAG 61
CAG HCM3 3HCM H 0 0 N N N 4.247 34.073 25.371 -0.953 1.012 9.036 HCM3 CAG 62
CAG "H3'" "H3'" H 0 1 N N N 10.382 33.179 25.657 3.011 -1.657 9.779 "H3'" CAG 63
CAG "H4'" "H4'" H 0 1 N N N 10.376 31.314 27.253 4.855 -0.122 9.249 "H4'" CAG 64
CAG "H5'" "H5'" H 0 1 N N N 8.342 29.959 27.517 4.477 1.796 7.757 "H5'" CAG 65
CAG "H6'" "H6'" H 0 1 N N N 6.323 30.536 26.260 2.254 2.198 6.783 "H6'" CAG 66
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CAG PG O1G DOUB N N 1
CAG PG O2G SING N N 2
CAG PG O3G SING N N 3
CAG PG O3B SING N N 4
CAG O2G HOG2 SING N N 5
CAG O3G "C'" SING N N 6
CAG PB O1B DOUB N N 7
CAG PB O2B SING N N 8
CAG PB O3B SING N N 9
CAG PB O3A SING N N 10
CAG O2B HOB2 SING N N 11
CAG PA O1A DOUB N N 12
CAG PA O2A SING N N 13
CAG PA O3A SING N N 14
CAG PA "O5'" SING N N 15
CAG O2A HOA2 SING N N 16
CAG "O5'" C5B SING N N 17
CAG C5B C4B SING N N 18
CAG C5B "H5'1" SING N N 19
CAG C5B "H5'2" SING N N 20
CAG C4B "O4'" SING N N 21
CAG C4B C3B SING N N 22
CAG C4B H4B SING N N 23
CAG "O4'" C1B SING N N 24
CAG C3B "O3'" SING N N 25
CAG C3B C2B SING N N 26
CAG C3B H3B SING N N 27
CAG "O3'" HO3 SING N N 28
CAG C2B "O2'" SING N N 29
CAG C2B C1B SING N N 30
CAG C2B "H2'" SING N N 31
CAG "O2'" HO2 SING N N 32
CAG C1B N9 SING N N 33
CAG C1B "H1'" SING N N 34
CAG N9 C8 SING Y N 35
CAG N9 C4 SING Y N 36
CAG C8 N7 DOUB Y N 37
CAG C8 H8 SING N N 38
CAG N7 C5 SING Y N 39
CAG C5 C6 SING Y N 40
CAG C5 C4 DOUB Y N 41
CAG C6 O6 DOUB N N 42
CAG C6 N1 SING Y N 43
CAG N1 C2 SING Y N 44
CAG N1 H1 SING N N 45
CAG C2 N2 SING N N 46
CAG C2 N3 DOUB Y N 47
CAG N2 H21 SING N N 48
CAG N2 H22 SING N N 49
CAG N3 C4 SING Y N 50
CAG "C'" "CM'" SING N N 51
CAG "C'" "C1'" SING N N 52
CAG "C'" "H'" SING N N 53
CAG "CM'" HCM1 SING N N 54
CAG "CM'" HCM2 SING N N 55
CAG "CM'" HCM3 SING N N 56
CAG "C1'" "C2'" DOUB Y N 57
CAG "C1'" "C6'" SING Y N 58
CAG "C2'" "N2'" SING N N 59
CAG "C2'" "C3'" SING Y N 60
CAG "N2'" "O'L" SING N N 61
CAG "N2'" "O'M" DOUB N N 62
CAG "C3'" "C4'" DOUB Y N 63
CAG "C3'" "H3'" SING N N 64
CAG "C4'" "C5'" SING Y N 65
CAG "C4'" "H4'" SING N N 66
CAG "C5'" "C6'" DOUB Y N 67
CAG "C5'" "H5'" SING N N 68
CAG "C6'" "H6'" SING N N 69
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CAG SMILES ACDLabs 10.04 "[O-][N+](=O)c1ccccc1C(OP(=O)(O)OP(=O)(O)OP(=O)(O)OCC4OC(n3cnc2c3N=C(N)NC2=O)C(O)C4O)C"
CAG SMILES_CANONICAL CACTVS 3.341 "C[C@@H](O[P@@](O)(=O)O[P@](O)(=O)O[P@](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3C(=O)NC(=Nc23)N)c4ccccc4[N+]([O-])=O"
CAG SMILES CACTVS 3.341 "C[CH](O[P](O)(=O)O[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3C(=O)NC(=Nc23)N)c4ccccc4[N+]([O-])=O"
CAG SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@H](c1ccccc1[N+](=O)[O-])O[P@](=O)(O)O[P@@](=O)(O)O[P@@](=O)(O)OC[C@@H]2[C@H]([C@H]([C@@H](O2)n3cnc4c3N=C(NC4=O)N)O)O"
CAG SMILES "OpenEye OEToolkits" 1.5.0 "CC(c1ccccc1[N+](=O)[O-])OP(=O)(O)OP(=O)(O)OP(=O)(O)OCC2C(C(C(O2)n3cnc4c3N=C(NC4=O)N)O)O"
CAG InChI InChI 1.03
;InChI=1S/C18H23N6O16P3/c1-8(9-4-2-3-5-10(9)24(28)29)38-42(32,33)40-43(34,35)39-41(30,31)36-6-11-13(25)14(26)17(37-11)23-7-20-12-15(23)21-18(19)22-16(12)27/h2-5,7-8,11,13-14,17,25-26H,6H2,1H3,(H,30,31)(H,32,33)(H,34,35)(H3,19,21,22,27)/t8-,11-,13-,14-,17-/m1/s1
;
CAG InChIKey InChI 1.03 NYWDUFBXCCSYMK-JPDTYCKISA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
CAG "SYSTEMATIC NAME" ACDLabs 10.04 "5'-O-[(S)-hydroxy{[(S)-hydroxy({(S)-hydroxy[(1R)-1-(2-nitrophenyl)ethoxy]phosphoryl}oxy)phosphoryl]oxy}phosphoryl]guanosine"
CAG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[[[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl] [(1R)-1-(2-nitrophenyl)ethyl] hydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CAG "Create component" 1999-07-08 RCSB
CAG "Modify descriptor" 2011-06-04 RCSB
#