5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE DNA linking ATOMN C9 H13 Br N3 O7 P DC 0 2003-07-16 2011-06-04 N REL C32 386.093 C CBR Y N 1UHX RCSB BR BR 0 0 N N N 15.283 13.751 3.838 -1.585 -5.035 0.251 BR CBR 1 P P 0 1 N N N 21.022 15.792 1.707 -3.968 -1.665 3.118 P CBR 2 O1P O 0 1 N N N 22.392 16.286 1.440 -4.406 -2.599 4.208 OP1 CBR 3 O2P O 0 1 N N N 20.825 14.410 2.225 -3.912 -2.311 1.636 OP2 CBR 4 O5* O 0 1 N N N 20.345 16.803 2.734 -2.493 -1.028 3.315 O5' CBR 5 N1 N 0 1 N N N 16.366 17.714 4.516 1.164 -2.047 0.989 N1 CBR 6 C6 C 0 1 N N N 16.398 16.353 4.358 0.010 -2.813 0.936 C6 CBR 7 C2 C 0 1 N N N 15.136 18.391 4.545 2.347 -2.526 0.381 C2 CBR 8 O2 O 0 1 N N N 15.134 19.622 4.652 3.388 -1.868 0.410 O2 CBR 9 N3 N 0 1 N N N 13.987 17.687 4.445 2.319 -3.754 -0.254 N3 CBR 10 C4 C 0 1 N N N 14.028 16.359 4.309 1.226 -4.473 -0.301 C4 CBR 11 N4 N 0 1 N N N 12.869 15.698 4.250 1.260 -5.689 -0.947 N4 CBR 12 C5 C 0 1 N N N 15.260 15.648 4.241 -0.045 -4.000 0.330 C5 CBR 13 C2* C 0 1 N N N 18.689 17.902 5.537 0.710 0.360 0.754 C2' CBR 14 C5* C 0 1 N N N 20.398 18.210 2.503 -2.005 -0.136 2.327 C5' CBR 15 C4* C 0 1 N N R 19.593 18.937 3.553 -0.611 0.328 2.728 C4' CBR 16 O4* O 0 1 N N N 18.189 18.630 3.388 0.247 -0.829 2.764 O4' CBR 17 C1* C 0 1 N N R 17.603 18.504 4.661 1.157 -0.778 1.657 C1' CBR 18 C3* C 0 1 N N S 19.954 18.549 4.990 0.008 1.286 1.720 C3' CBR 19 O3* O 0 1 N N N 20.335 19.720 5.721 0.965 2.121 2.368 O3' CBR 20 O3P O 0 1 N Y N -4.901 -0.360 2.920 OP3 CBR 21 2HOP H 0 0 N N N 19.946 14.093 2.396 -4.684 -2.823 1.313 HOP2 CBR 22 H6 H 0 1 N N N 17.359 15.813 4.324 -0.857 -2.379 1.425 H6 CBR 23 1H4 H 0 1 N N N 12.900 14.683 4.146 0.456 -6.265 -0.897 H41 CBR 24 2H4 H 0 1 N N N 12.296 16.092 3.503 2.088 -5.933 -1.433 H42 CBR 25 1H2* H 0 1 N N N 18.532 18.033 6.633 -0.003 -0.001 0.003 H2' CBR 26 2H2* H 0 0 N N N 18.706 16.787 5.561 1.556 0.818 0.232 H2'' CBR 27 1H5* H 0 1 N N N 21.446 18.584 2.446 -1.971 -0.654 1.366 H5' CBR 28 2H5* H 0 0 N N N 20.074 18.476 1.469 -2.683 0.718 2.254 H5'' CBR 29 H4* H 0 1 N N N 19.823 20.018 3.406 -0.644 0.753 3.736 H4' CBR 30 H1* H 0 1 N N N 17.273 19.454 5.142 2.163 -0.604 2.054 H1' CBR 31 H3* H 0 1 N N N 20.819 17.850 5.064 -0.722 1.941 1.236 H3' CBR 32 H3T H 0 0 N Y N 21.124 20.123 5.379 0.736 3.043 2.156 HO3' CBR 33 3HOP H 0 0 N N N -0.879 -0.317 0.171 -5.874 -0.475 2.871 HOP3 CBR 34 sing N N 1 doub N N 2 sing N N 3 sing N N 4 sing N N 5 sing N N 6 sing N N 7 sing N N 8 sing N N 9 sing N N 10 doub N N 11 sing N N 12 doub N N 13 sing N N 14 doub N N 15 sing N N 16 sing N N 17 sing N N 18 sing N N 19 sing N N 20 sing N N 21 sing N N 22 sing N N 23 sing N N 24 sing N N 25 sing N N 26 sing N N 27 sing N N 28 sing N N 29 sing N N 30 sing N N 31 sing N N 32 sing N N 33 sing N N 34 sing N N 35 BrC=1C(=NC(=O)N(C=1)C2OC(C(O)C2)COP(=O)(O)O)N NC1=NC(=O)N(C=C1Br)[C@H]2C[C@H](O)[C@@H](CO[P](O)(O)=O)O2 NC1=NC(=O)N(C=C1Br)[CH]2C[CH](O)[CH](CO[P](O)(O)=O)O2 C1[C@@H]([C@H](O[C@H]1N2C=C(C(=NC2=O)N)Br)COP(=O)(O)O)O C1C(C(OC1N2C=C(C(=NC2=O)N)Br)COP(=O)(O)O)O InChI=1S/C9H13BrN3O7P/c10-4-2-13(9(15)12-8(4)11)7-1-5(14)6(20-7)3-19-21(16,17)18/h2,5-7,14H,1,3H2,(H2,11,12,15)(H2,16,17,18)/t5-,6+,7+/m0/s1 PLDRCXOBLRYJSZ-RRKCRQDMSA-N 5-bromo-2'-deoxycytidine 5'-(dihydrogen phosphate) [(2R,3S,5R)-5-(4-amino-5-bromo-2-oxo-pyrimidin-1-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate RCSB RCSB