data_CDH # _chem_comp.id CDH _chem_comp.name "D-(L-A-AMINOADIPOYL)-L-CYSTEINYL-D-ISODEHYDROVALINE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H23 N3 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2004-03-17 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 361.414 _chem_comp.one_letter_code ? _chem_comp.three_letter_code CDH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1UZW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal CDH O43 O43 O 0 1 N N N 4.364 36.169 5.217 2.449 -4.547 -0.768 O43 CDH 1 CDH C31 C31 C 0 1 N N N 5.204 37.074 5.379 3.406 -3.818 -0.536 C31 CDH 2 CDH O42 O42 O 0 1 N N N 5.119 37.912 6.300 4.212 -3.983 0.541 O42 CDH 3 CDH C30 C30 C 0 1 N N R 6.380 37.131 4.391 3.848 -2.680 -1.439 C30 CDH 4 CDH C32 C32 C 0 1 N N N 5.915 36.622 2.932 2.749 -1.654 -1.569 C32 CDH 5 CDH C37 C37 C 0 1 N N N 4.792 36.491 2.493 2.193 -1.389 -2.763 C37 CDH 6 CDH C33 C33 C 0 1 N N N 7.041 36.265 1.973 2.275 -0.946 -0.328 C33 CDH 7 CDH N29 N29 N 0 1 N N N 7.094 38.383 4.611 5.068 -2.053 -0.988 N29 CDH 8 CDH C13 C13 C 0 1 N N N 8.039 38.582 5.560 6.016 -1.542 -1.863 C13 CDH 9 CDH O18 O18 O 0 1 N N N 7.957 38.045 6.642 5.924 -1.567 -3.089 O18 CDH 10 CDH C12 C12 C 0 1 N N S 9.168 39.546 5.175 7.198 -0.909 -1.131 C12 CDH 11 CDH C16 C16 C 0 1 N N N 8.869 40.308 3.864 6.792 0.239 -0.203 C16 CDH 12 CDH S S S 0 1 N N N 8.641 39.602 3.031 5.995 1.633 -1.066 S CDH 13 CDH N30 N30 N 0 1 N N N ? ? ? 8.189 -0.509 -2.101 N30 CDH 14 CDH C25 C25 C 0 1 N N N ? ? ? 9.549 -0.574 -1.834 C25 CDH 15 CDH O25 O25 O 0 1 N N N ? ? ? 10.041 -0.967 -0.780 O25 CDH 16 CDH C24 C24 C 0 1 N N N ? ? ? 10.374 -0.096 -3.015 C24 CDH 17 CDH C23 C23 C 0 1 N N N ? ? ? 11.876 -0.160 -2.741 C23 CDH 18 CDH C22 C22 C 0 1 N N N ? ? ? 12.680 0.371 -3.936 C22 CDH 19 CDH C21 C21 C 0 1 N N S ? ? ? 14.201 0.391 -3.723 C21 CDH 20 CDH N31 N31 N 0 1 N N N ? ? ? 14.735 -0.958 -3.548 N31 CDH 21 CDH C20 C20 C 0 1 N N N ? ? ? 14.599 1.219 -2.518 C20 CDH 22 CDH O20 O20 O 0 1 N N N ? ? ? 15.198 0.819 -1.530 O20 CDH 23 CDH O21 O21 O 0 1 N N N ? ? ? 14.209 2.511 -2.679 O21 CDH 24 CDH H42 H42 H 0 1 N N N 4.342 37.737 6.818 3.934 -4.744 1.094 H42 CDH 25 CDH H30 H30 H 0 1 N N N 7.190 36.404 4.550 4.092 -3.130 -2.409 H30 CDH 26 CDH H371 1H37 H 0 0 N N N 4.818 36.128 1.476 2.524 -1.891 -3.666 H371 CDH 27 CDH H372 2H37 H 0 0 N N N 3.889 36.708 3.044 1.394 -0.662 -2.865 H372 CDH 28 CDH H331 1H33 H 0 0 N N N 6.640 36.179 0.952 1.961 -1.666 0.433 H331 CDH 29 CDH H332 2H33 H 0 0 N N N 7.809 37.052 2.000 1.419 -0.293 -0.531 H332 CDH 30 CDH H333 3H33 H 0 0 N N N 7.488 35.306 2.273 3.070 -0.320 0.089 H333 CDH 31 CDH H29 H29 H 0 1 N N N 6.868 39.154 4.015 5.247 -2.028 0.012 H29 CDH 32 CDH H121 1H12 H 0 0 N N N 9.892 40.238 5.629 7.674 -1.694 -0.530 H121 CDH 33 CDH H161 1H16 H 0 0 N N N 8.001 40.964 4.023 6.095 -0.114 0.563 H161 CDH 34 CDH H162 2H16 H 0 0 N N N 9.758 40.896 3.591 7.675 0.634 0.310 H162 CDH 35 CDH HS HS H 0 1 N N N 8.552 40.262 1.915 4.970 1.752 -0.212 HS CDH 36 CDH H30N NH30 H 0 0 N N N ? ? ? 7.869 -0.160 -3.000 H30N CDH 37 CDH H241 1H24 H 0 0 N N N ? ? ? 10.079 0.936 -3.243 H241 CDH 38 CDH H242 2H24 H 0 0 N N N ? ? ? 10.125 -0.718 -3.882 H242 CDH 39 CDH H231 1H23 H 0 0 N N N ? ? ? 12.160 -1.197 -2.526 H231 CDH 40 CDH H232 2H23 H 0 0 N N N ? ? ? 12.106 0.426 -1.843 H232 CDH 41 CDH H221 1H22 H 0 0 N N N ? ? ? 12.452 -0.240 -4.819 H221 CDH 42 CDH H222 2H22 H 0 0 N N N ? ? ? 12.335 1.387 -4.169 H222 CDH 43 CDH H211 1H21 H 0 0 N N N ? ? ? 14.685 0.833 -4.602 H211 CDH 44 CDH H311 1H31 H 0 0 N N N ? ? ? 14.798 -1.320 -2.622 H311 CDH 45 CDH H312 2H31 H 0 0 N N N ? ? ? 15.200 -1.381 -4.322 H312 CDH 46 CDH H21 H21 H 0 1 N N N ? ? ? 14.468 3.069 -1.914 H21 CDH 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal CDH O43 C31 DOUB N N 1 CDH C31 O42 SING N N 2 CDH C31 C30 SING N N 3 CDH O42 H42 SING N N 4 CDH C30 C32 SING N N 5 CDH C30 N29 SING N N 6 CDH C30 H30 SING N N 7 CDH C32 C37 DOUB N N 8 CDH C32 C33 SING N N 9 CDH C37 H371 SING N N 10 CDH C37 H372 SING N N 11 CDH C33 H331 SING N N 12 CDH C33 H332 SING N N 13 CDH C33 H333 SING N N 14 CDH N29 C13 SING N N 15 CDH N29 H29 SING N N 16 CDH C13 O18 DOUB N N 17 CDH C13 C12 SING N N 18 CDH C12 C16 SING N N 19 CDH C12 N30 SING N N 20 CDH C12 H121 SING N N 21 CDH C16 S SING N N 22 CDH C16 H161 SING N N 23 CDH C16 H162 SING N N 24 CDH S HS SING N N 25 CDH N30 C25 SING N N 26 CDH N30 H30N SING N N 27 CDH C25 O25 DOUB N N 28 CDH C25 C24 SING N N 29 CDH C24 C23 SING N N 30 CDH C24 H241 SING N N 31 CDH C24 H242 SING N N 32 CDH C23 C22 SING N N 33 CDH C23 H231 SING N N 34 CDH C23 H232 SING N N 35 CDH C22 C21 SING N N 36 CDH C22 H221 SING N N 37 CDH C22 H222 SING N N 38 CDH C21 N31 SING N N 39 CDH C21 C20 SING N N 40 CDH C21 H211 SING N N 41 CDH N31 H311 SING N N 42 CDH N31 H312 SING N N 43 CDH C20 O20 DOUB N N 44 CDH C20 O21 SING N N 45 CDH O21 H21 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor CDH SMILES ACDLabs 10.04 "O=C(NC(C(=C)\C)C(=O)O)C(NC(=O)CCCC(C(=O)O)N)CS" CDH SMILES_CANONICAL CACTVS 3.341 "CC(=C)[C@@H](NC(=O)[C@H](CS)NC(=O)CCCC(N)C(O)=O)C(O)=O" CDH SMILES CACTVS 3.341 "CC(=C)[CH](NC(=O)[CH](CS)NC(=O)CCCC(N)C(O)=O)C(O)=O" CDH SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(=C)[C@H](C(=O)O)NC(=O)[C@H](CS)NC(=O)CCC[C@@H](C(=O)O)N" CDH SMILES "OpenEye OEToolkits" 1.5.0 "CC(=C)C(C(=O)O)NC(=O)C(CS)NC(=O)CCCC(C(=O)O)N" CDH InChI InChI 1.03 "InChI=1S/C14H23N3O6S/c1-7(2)11(14(22)23)17-12(19)9(6-24)16-10(18)5-3-4-8(15)13(20)21/h8-9,11,24H,1,3-6,15H2,2H3,(H,16,18)(H,17,19)(H,20,21)(H,22,23)/t8?,9?,11-/m1/s1" CDH InChIKey InChI 1.03 BGZJEMYSINIAHS-NWGYLPEXSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier CDH "SYSTEMATIC NAME" ACDLabs 10.04 "N~6~-[(1R)-2-{[(1R)-1-carboxy-2-methylprop-2-en-1-yl]amino}-2-oxo-1-(sulfanylmethyl)ethyl]-6-oxolysine" CDH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-amino-6-[[(2R)-1-[[(2R)-1-hydroxy-3-methyl-1-oxo-but-3-en-2-yl]amino]-1-oxo-3-sulfanyl-propan-2-yl]amino]-6-oxo-hexanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site CDH "Create component" 2004-03-17 EBI CDH "Modify descriptor" 2011-06-04 RCSB #