data_CEZ # _chem_comp.id CEZ _chem_comp.name "4-O-beta-D-glucopyranosyl-D-gluconic acid" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C12 H22 O12" _chem_comp.mon_nstd_parent_comp_id BGC _chem_comp.pdbx_synonyms "cellobionic acid; 4-O-beta-D-glucosyl-D-gluconic acid; 4-O-D-glucosyl-D-gluconic acid; 4-O-glucosyl-D-gluconic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-05-12 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 358.296 _chem_comp.one_letter_code ? _chem_comp.three_letter_code CEZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4ZLF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 CEZ "cellobionic acid" PDB ? 2 CEZ "4-O-beta-D-glucosyl-D-gluconic acid" PDB ? 3 CEZ "4-O-D-glucosyl-D-gluconic acid" PDB ? 4 CEZ "4-O-glucosyl-D-gluconic acid" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal CEZ O1 O1 O 0 1 N N N 60.162 -44.626 -3.551 -0.376 -0.689 -0.600 O1 CEZ 1 CEZ C1 C1 C 0 1 N N S 58.900 -44.092 -3.889 0.962 -0.531 -0.125 C1 CEZ 2 CEZ C2 C2 C 0 1 N N R 58.322 -45.248 -4.766 1.937 -0.635 -1.301 C2 CEZ 3 CEZ O2 O2 O 0 1 N N N 59.009 -44.980 -6.074 1.841 -1.936 -1.886 O2 CEZ 4 CEZ O5 O5 O 0 1 N N N 58.149 -43.976 -2.670 1.100 0.750 0.494 O5 CEZ 5 CEZ C5 C5 C 0 1 N N R 56.754 -43.612 -2.936 2.401 1.002 1.030 C5 CEZ 6 CEZ C4 C4 C 0 1 N N S 56.191 -44.787 -3.689 3.434 0.959 -0.100 C4 CEZ 7 CEZ O4 O4 O 0 1 N N N 54.784 -44.515 -3.947 4.742 1.155 0.441 O4 CEZ 8 CEZ C3 C3 C 0 1 N N S 56.819 -44.944 -5.071 3.364 -0.405 -0.793 C3 CEZ 9 CEZ O3 O3 O 0 1 N N N 56.294 -46.061 -5.767 4.273 -0.428 -1.895 O3 CEZ 10 CEZ C6 C6 C 0 1 N N N 56.154 -43.285 -1.561 2.423 2.383 1.688 C6 CEZ 11 CEZ O6 O6 O 0 1 N N N 56.546 -44.294 -0.603 1.543 2.387 2.814 O6 CEZ 12 CEZ O12 O12 O 0 1 N N N 62.514 -45.667 1.819 -4.424 2.388 0.293 O12 CEZ 13 CEZ C11 C11 C 0 1 N N N 62.697 -45.576 0.543 -3.388 2.224 -0.544 C11 CEZ 14 CEZ O11 O11 O 0 1 N N N 63.499 -46.167 -0.209 -3.421 2.713 -1.649 O11 CEZ 15 CEZ C21 C21 C 0 1 N N R 62.302 -44.424 -0.290 -2.184 1.430 -0.108 C21 CEZ 16 CEZ O21 O21 O 0 1 N N N 61.439 -43.430 0.311 -1.177 1.496 -1.120 O21 CEZ 17 CEZ C31 C31 C 0 1 N N R 61.462 -44.919 -1.576 -2.588 -0.029 0.115 C31 CEZ 18 CEZ O31 O31 O 0 1 N N N 60.393 -45.609 -0.962 -3.207 -0.537 -1.068 O31 CEZ 19 CEZ C41 C41 C 0 1 N N R 60.968 -43.848 -2.589 -1.344 -0.860 0.437 C41 CEZ 20 CEZ C51 C51 C 0 1 N N R 61.988 -42.800 -3.257 -1.730 -2.337 0.537 C51 CEZ 21 CEZ O51 O51 O 0 1 N N N 61.278 -41.592 -3.896 -2.779 -2.492 1.494 O51 CEZ 22 CEZ C61 C61 C 0 1 N N N 62.922 -43.361 -4.255 -0.512 -3.153 0.977 C61 CEZ 23 CEZ O61 O61 O 0 1 N N N 63.772 -42.172 -4.659 -0.841 -4.543 0.964 O61 CEZ 24 CEZ H1 H1 H 0 1 N N N 58.956 -43.151 -4.456 1.185 -1.312 0.603 H1 CEZ 25 CEZ H2 H2 H 0 1 N N N 58.496 -46.251 -4.350 1.690 0.119 -2.047 H2 CEZ 26 CEZ HO2 H3 H 0 1 N Y N 59.941 -45.141 -5.982 0.962 -2.150 -2.225 HO2 CEZ 27 CEZ H5 H4 H 0 1 N N N 56.712 -42.714 -3.570 2.642 0.241 1.772 H5 CEZ 28 CEZ H4 H5 H 0 1 N N N 56.317 -45.712 -3.108 3.217 1.746 -0.822 H4 CEZ 29 CEZ HO4 H6 H 0 1 N Y N 54.326 -44.405 -3.122 5.447 1.139 -0.220 HO4 CEZ 30 CEZ H3 H7 H 0 1 N N N 56.730 -44.011 -5.647 3.629 -1.189 -0.083 H3 CEZ 31 CEZ HO3 H8 H 0 1 N Y N 55.378 -45.908 -5.968 4.276 -1.262 -2.385 HO3 CEZ 32 CEZ H61 H9 H 0 1 N N N 56.520 -42.303 -1.227 3.436 2.612 2.018 H61 CEZ 33 CEZ H62 H10 H 0 1 N N N 55.057 -43.261 -1.638 2.096 3.134 0.969 H62 CEZ 34 CEZ HO6 H11 H 0 1 N Y N 56.173 -44.088 0.246 1.506 3.233 3.282 HO6 CEZ 35 CEZ H12 H12 H 0 1 N N N 63.119 -46.303 2.182 -5.173 2.905 -0.032 H12 CEZ 36 CEZ H13 H13 H 0 1 N N N 63.211 -43.932 -0.667 -1.793 1.844 0.822 H13 CEZ 37 CEZ H14 H14 H 0 1 N N N 61.856 -43.076 1.088 -1.456 1.143 -1.976 H14 CEZ 38 CEZ H15 H15 H 0 1 N N N 62.097 -45.632 -2.123 -3.290 -0.088 0.947 H15 CEZ 39 CEZ H16 H16 H 0 1 N N N 60.738 -46.251 -0.353 -2.639 -0.515 -1.850 H16 CEZ 40 CEZ H17 H17 H 0 1 N N N 60.255 -43.226 -2.028 -0.923 -0.529 1.386 H17 CEZ 41 CEZ H18 H18 H 0 1 N N N 62.595 -42.404 -2.429 -2.071 -2.690 -0.437 H18 CEZ 42 CEZ H19 H19 H 0 1 N N N 60.671 -41.214 -3.271 -2.545 -2.197 2.385 H19 CEZ 43 CEZ H20 H20 H 0 1 N N N 62.376 -43.765 -5.120 0.316 -2.968 0.293 H20 CEZ 44 CEZ H21 H21 H 0 1 N N N 63.542 -44.153 -3.810 -0.223 -2.857 1.986 H21 CEZ 45 CEZ H22 H22 H 0 1 N N N 64.410 -42.444 -5.308 -0.114 -5.122 1.233 H22 CEZ 46 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal CEZ O2 C2 SING N N 1 CEZ O3 C3 SING N N 2 CEZ C3 C2 SING N N 3 CEZ C3 C4 SING N N 4 CEZ C2 C1 SING N N 5 CEZ O61 C61 SING N N 6 CEZ C61 C51 SING N N 7 CEZ O4 C4 SING N N 8 CEZ O51 C51 SING N N 9 CEZ C1 O1 SING N N 10 CEZ C1 O5 SING N N 11 CEZ C4 C5 SING N N 12 CEZ O1 C41 SING N N 13 CEZ C51 C41 SING N N 14 CEZ C5 O5 SING N N 15 CEZ C5 C6 SING N N 16 CEZ C41 C31 SING N N 17 CEZ C31 O31 SING N N 18 CEZ C31 C21 SING N N 19 CEZ C6 O6 SING N N 20 CEZ C21 O21 SING N N 21 CEZ C21 C11 SING N N 22 CEZ O11 C11 DOUB N N 23 CEZ C11 O12 SING N N 24 CEZ C1 H1 SING N N 25 CEZ C2 H2 SING N N 26 CEZ O2 HO2 SING N N 27 CEZ C5 H5 SING N N 28 CEZ C4 H4 SING N N 29 CEZ O4 HO4 SING N N 30 CEZ C3 H3 SING N N 31 CEZ O3 HO3 SING N N 32 CEZ C6 H61 SING N N 33 CEZ C6 H62 SING N N 34 CEZ O6 HO6 SING N N 35 CEZ O12 H12 SING N N 36 CEZ C21 H13 SING N N 37 CEZ O21 H14 SING N N 38 CEZ C31 H15 SING N N 39 CEZ O31 H16 SING N N 40 CEZ C41 H17 SING N N 41 CEZ C51 H18 SING N N 42 CEZ O51 H19 SING N N 43 CEZ C61 H20 SING N N 44 CEZ C61 H21 SING N N 45 CEZ O61 H22 SING N N 46 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor CEZ SMILES ACDLabs 12.01 "O(C(C(C(C(O)=O)O)O)C(O)CO)C1OC(CO)C(O)C(C1O)O" CEZ InChI InChI 1.03 "InChI=1S/C12H22O12/c13-1-3(15)10(7(18)8(19)11(21)22)24-12-9(20)6(17)5(16)4(2-14)23-12/h3-10,12-20H,1-2H2,(H,21,22)/t3-,4-,5-,6+,7-,8-,9-,10-,12+/m1/s1" CEZ InChIKey InChI 1.03 JYTUSYBCFIZPBE-ZNLUKOTNSA-N CEZ SMILES_CANONICAL CACTVS 3.385 "OC[C@@H](O)[C@@H](O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O)[C@H](O)[C@@H](O)C(O)=O" CEZ SMILES CACTVS 3.385 "OC[CH](O)[CH](O[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O)[CH](O)[CH](O)C(O)=O" CEZ SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O[C@H]([C@@H](CO)O)[C@@H]([C@H](C(=O)O)O)O)O)O)O)O" CEZ SMILES "OpenEye OEToolkits" 1.9.2 "C(C1C(C(C(C(O1)OC(C(CO)O)C(C(C(=O)O)O)O)O)O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier CEZ "SYSTEMATIC NAME" ACDLabs 12.01 "4-O-beta-D-glucopyranosyl-D-gluconic acid" CEZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 ;(2R,3R,4R,5R)-4-[(2S,3R,4S,5S,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-2,3,5,6-tetrakis(oxidanyl)hexanoi c acid ; # _pdbx_chem_comp_related.comp_id CEZ _pdbx_chem_comp_related.related_comp_id BGC _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 CEZ C1 BGC C1 "Carbohydrate core" 2 CEZ C2 BGC C2 "Carbohydrate core" 3 CEZ C3 BGC C3 "Carbohydrate core" 4 CEZ C4 BGC C4 "Carbohydrate core" 5 CEZ C5 BGC C5 "Carbohydrate core" 6 CEZ C6 BGC C6 "Carbohydrate core" 7 CEZ O1 BGC O1 "Carbohydrate core" 8 CEZ O2 BGC O2 "Carbohydrate core" 9 CEZ O3 BGC O3 "Carbohydrate core" 10 CEZ O4 BGC O4 "Carbohydrate core" 11 CEZ O5 BGC O5 "Carbohydrate core" 12 CEZ O6 BGC O6 "Carbohydrate core" 13 CEZ H1 BGC H1 "Carbohydrate core" 14 CEZ H62 BGC H62 "Carbohydrate core" 15 CEZ HO6 BGC HO6 "Carbohydrate core" 16 CEZ H2 BGC H2 "Carbohydrate core" 17 CEZ HO2 BGC HO2 "Carbohydrate core" 18 CEZ H5 BGC H5 "Carbohydrate core" 19 CEZ H4 BGC H4 "Carbohydrate core" 20 CEZ HO4 BGC HO4 "Carbohydrate core" 21 CEZ H3 BGC H3 "Carbohydrate core" 22 CEZ HO3 BGC HO3 "Carbohydrate core" 23 CEZ H61 BGC H61 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support CEZ "CARBOHYDRATE ISOMER" D PDB ? CEZ "CARBOHYDRATE RING" pyranose PDB ? CEZ "CARBOHYDRATE ANOMER" beta PDB ? CEZ "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site CEZ "Create component" 2015-05-12 PDBJ CEZ "Initial release" 2015-06-10 RCSB CEZ "Other modification" 2020-07-03 RCSB CEZ "Modify parent residue" 2020-07-17 RCSB CEZ "Modify synonyms" 2020-07-17 RCSB CEZ "Modify internal type" 2020-07-17 RCSB CEZ "Modify linking type" 2020-07-17 RCSB CEZ "Modify atom id" 2020-07-17 RCSB CEZ "Modify component atom id" 2020-07-17 RCSB CEZ "Modify leaving atom flag" 2020-07-17 RCSB ##