data_CGB # _chem_comp.id CGB _chem_comp.name "CALYSTEGINE B2" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H13 N O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(1S,2R,3S,4R,5S)-8-AZABICYCLO[3.2.1]OCTANE-1,2,3,4-TETROL" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2006-01-09 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 175.182 _chem_comp.one_letter_code ? _chem_comp.three_letter_code CGB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2CBV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal CGB O2 O2 O 0 1 N N N 0.589 12.877 10.418 -2.741 -0.002 -0.471 O2 CGB 1 CGB C2 C2 C 0 1 N N R 0.047 11.645 9.945 -1.357 -0.211 -0.183 C2 CGB 2 CGB N1 N1 N 0 1 N N N -1.044 11.199 10.787 -0.746 -1.234 -1.072 N1 CGB 3 CGB C8 C8 C 0 1 N N N 1.012 10.468 10.059 -1.132 -0.747 1.249 C8 CGB 4 CGB C7 C7 C 0 1 N N N 0.116 9.246 10.283 0.110 -1.656 1.140 C7 CGB 5 CGB C6 C6 C 0 1 N N R -1.300 9.828 10.447 0.520 -1.589 -0.377 C6 CGB 6 CGB C3 C3 C 0 1 N N S -0.454 11.763 8.488 -0.533 1.078 -0.338 C3 CGB 7 CGB O3 O3 O 0 1 N N N 0.686 12.052 7.664 -1.132 2.126 0.426 O3 CGB 8 CGB C4 C4 C 0 1 N N R -1.187 10.468 8.034 0.889 0.821 0.169 C4 CGB 9 CGB O4 O4 O 0 1 N N N -1.936 10.699 6.843 1.701 1.966 -0.096 O4 CGB 10 CGB C5 C5 C 0 1 N N S -2.092 9.896 9.128 1.479 -0.400 -0.543 C5 CGB 11 CGB O5 O5 O 0 1 N N N -2.569 8.576 8.799 2.746 -0.723 0.033 O5 CGB 12 CGB HO HO H 0 1 N N N 0.709 12.830 11.359 -3.183 -0.853 -0.351 HO CGB 13 CGB H1 H1 H 0 1 N N N -0.793 11.277 11.752 -1.343 -2.047 -1.020 H1 CGB 14 CGB H8C1 1H8C H 0 0 N N N 1.735 10.605 10.877 -0.940 0.077 1.937 H8C1 CGB 15 CGB H8C2 2H8C H 0 0 N N N 1.609 10.357 9.142 -1.996 -1.323 1.579 H8C2 CGB 16 CGB H7C1 1H7C H 0 0 N N N 0.427 8.658 11.159 0.912 -1.279 1.774 H7C1 CGB 17 CGB H7C2 2H7C H 0 0 N N N 0.165 8.556 9.427 -0.144 -2.679 1.416 H7C2 CGB 18 CGB H6 H6 H 0 1 N N N -1.873 9.218 11.160 0.947 -2.527 -0.730 H6 CGB 19 CGB H3 H3 H 0 1 N N N -1.194 12.572 8.400 -0.499 1.365 -1.389 H3 CGB 20 CGB HA HA H 0 1 N N N 0.413 12.116 6.756 -0.578 2.910 0.306 HA CGB 21 CGB H4 H4 H 0 1 N N N -0.408 9.719 7.827 0.862 0.636 1.243 H4 CGB 22 CGB HB HB H 0 1 N N N -2.861 10.750 7.055 2.585 1.765 0.241 HB CGB 23 CGB H5 H5 H 0 1 N N N -2.966 10.557 9.226 1.606 -0.178 -1.603 H5 CGB 24 CGB HC HC H 0 1 N N N -2.674 8.502 7.858 3.315 0.050 -0.090 HC CGB 25 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal CGB O2 C2 SING N N 1 CGB O2 HO SING N N 2 CGB C2 N1 SING N N 3 CGB C2 C8 SING N N 4 CGB C2 C3 SING N N 5 CGB N1 C6 SING N N 6 CGB N1 H1 SING N N 7 CGB C8 C7 SING N N 8 CGB C8 H8C1 SING N N 9 CGB C8 H8C2 SING N N 10 CGB C7 C6 SING N N 11 CGB C7 H7C1 SING N N 12 CGB C7 H7C2 SING N N 13 CGB C6 C5 SING N N 14 CGB C6 H6 SING N N 15 CGB C3 O3 SING N N 16 CGB C3 C4 SING N N 17 CGB C3 H3 SING N N 18 CGB O3 HA SING N N 19 CGB C4 O4 SING N N 20 CGB C4 C5 SING N N 21 CGB C4 H4 SING N N 22 CGB O4 HB SING N N 23 CGB C5 O5 SING N N 24 CGB C5 H5 SING N N 25 CGB O5 HC SING N N 26 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor CGB SMILES ACDLabs 10.04 "OC12NC(CC1)C(O)C(O)C2O" CGB SMILES_CANONICAL CACTVS 3.341 "O[C@@H]1[C@@H](O)[C@H](O)[C@]2(O)CC[C@H]1N2" CGB SMILES CACTVS 3.341 "O[CH]1[CH](O)[CH](O)[C]2(O)CC[CH]1N2" CGB SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C1C[C@]2([C@H]([C@@H]([C@H]([C@@H]1N2)O)O)O)O" CGB SMILES "OpenEye OEToolkits" 1.5.0 "C1CC2(C(C(C(C1N2)O)O)O)O" CGB InChI InChI 1.03 "InChI=1S/C7H13NO4/c9-4-3-1-2-7(12,8-3)6(11)5(4)10/h3-6,8-12H,1-2H2/t3-,4+,5-,6+,7-/m1/s1" CGB InChIKey InChI 1.03 FXFBVZOJVHCEDO-IBISWUOJSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier CGB "SYSTEMATIC NAME" ACDLabs 10.04 "(1R,2S,3R,4S,5R)-8-azabicyclo[3.2.1]octane-1,2,3,4-tetrol" CGB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(1R,2S,3R,4S,5R)-8-azabicyclo[3.2.1]octane-1,2,3,4-tetrol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site CGB "Create component" 2006-01-09 EBI CGB "Modify descriptor" 2011-06-04 RCSB CGB "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id CGB _pdbx_chem_comp_synonyms.name "(1S,2R,3S,4R,5S)-8-AZABICYCLO[3.2.1]OCTANE-1,2,3,4-TETROL" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##