data_CKD
#
_chem_comp.id CKD
_chem_comp.name "(S)-N-(3-fluoro-2-(2-(1-(phenylsulfonyl)piperazin-2-yl)ethyl)phenyl)-3,3-bis(4-fluorophenyl)propanamide"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C33 H32 F3 N3 O3 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-09-27
_chem_comp.pdbx_modified_date 2017-12-29
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 607.686
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code CKD
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6B36
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CKD C2 C1 C 0 1 N N S -15.074 20.561 -5.484 4.123 -0.596 -1.166 C2 CKD 1
CKD C3 C2 C 0 1 Y N N -18.369 19.595 -6.734 2.666 -1.888 1.727 C3 CKD 2
CKD C5 C3 C 0 1 Y N N -18.142 17.952 -8.460 0.285 -1.671 1.858 C5 CKD 3
CKD C7 C4 C 0 1 Y N N -20.065 17.929 -7.027 1.311 -3.814 2.155 C7 CKD 4
CKD C9 C5 C 0 1 N N N -16.742 19.475 -3.917 5.640 -2.479 -0.442 C9 CKD 5
CKD C10 C6 C 0 1 N N N -14.126 21.358 -4.588 3.342 0.576 -0.567 C10 CKD 6
CKD C11 C7 C 0 1 N N N -14.383 22.867 -4.626 2.622 1.334 -1.684 C11 CKD 7
CKD C12 C8 C 0 1 Y N N -13.519 23.633 -3.641 1.919 2.534 -1.105 C12 CKD 8
CKD C13 C9 C 0 1 Y N N -12.362 24.345 -4.049 0.583 2.447 -0.739 C13 CKD 9
CKD C15 C10 C 0 1 Y N N -11.858 24.920 -1.766 0.627 4.741 -0.040 C15 CKD 10
CKD C18 C11 C 0 1 N N N -10.728 23.825 -5.829 -1.457 1.252 -0.999 C18 CKD 11
CKD C20 C12 C 0 1 N N N -10.444 22.901 -8.145 -3.716 0.238 -1.144 C20 CKD 12
CKD C21 C13 C 0 1 Y N N -9.567 22.998 -9.388 -4.465 -1.059 -1.306 C21 CKD 13
CKD C22 C14 C 0 1 Y N N -9.644 24.095 -10.246 -5.184 -1.302 -2.462 C22 CKD 14
CKD F2 F1 F 0 1 N N N -15.458 20.915 -9.736 -5.462 2.843 3.524 F2 CKD 15
CKD C30 C15 C 0 1 Y N N -14.269 21.410 -9.322 -5.043 2.217 2.402 C30 CKD 16
CKD C29 C16 C 0 1 Y N N -13.427 20.587 -8.626 -4.208 1.115 2.494 C29 CKD 17
CKD C28 C17 C 0 1 Y N N -12.207 21.095 -8.214 -3.780 0.476 1.346 C28 CKD 18
CKD C31 C18 C 0 1 Y N N -13.963 22.718 -9.615 -5.451 2.673 1.160 C31 CKD 19
CKD C32 C19 C 0 1 Y N N -12.742 23.212 -9.190 -5.021 2.032 0.014 C32 CKD 20
CKD C27 C20 C 0 1 Y N N -11.839 22.406 -8.499 -4.184 0.936 0.107 C27 CKD 21
CKD C26 C21 C 0 1 Y N N -8.756 21.930 -9.751 -4.430 -2.008 -0.301 C26 CKD 22
CKD C25 C22 C 0 1 Y N N -8.060 21.933 -10.951 -5.117 -3.198 -0.448 C25 CKD 23
CKD C24 C23 C 0 1 Y N N -8.198 23.022 -11.779 -5.841 -3.440 -1.603 C24 CKD 24
CKD F1 F2 F 0 1 N N N -7.568 23.007 -12.984 -6.514 -4.602 -1.747 F1 CKD 25
CKD C23 C24 C 0 1 Y N N -8.964 24.111 -11.454 -5.873 -2.491 -2.611 C23 CKD 26
CKD C19 C25 C 0 1 N N N -10.475 24.177 -7.282 -2.217 -0.049 -1.038 C19 CKD 27
CKD O2 O1 O 0 1 N N N -9.883 23.263 -5.151 -2.056 2.305 -1.052 O2 CKD 28
CKD N2 N1 N 0 1 N N N -11.965 24.071 -5.377 -0.113 1.245 -0.906 N2 CKD 29
CKD C14 C26 C 0 1 Y N N -11.537 24.976 -3.112 -0.062 3.556 -0.205 C14 CKD 30
CKD C16 C27 C 0 1 Y N N -12.984 24.233 -1.341 1.959 4.825 -0.400 C16 CKD 31
CKD C17 C28 C 0 1 Y N N -13.770 23.611 -2.281 2.606 3.723 -0.932 C17 CKD 32
CKD F F3 F 0 1 N N N -14.838 22.895 -1.856 3.908 3.807 -1.282 F CKD 33
CKD C1 C29 C 0 1 N N N -14.530 19.179 -5.821 5.277 -0.061 -2.021 C1 CKD 34
CKD N N2 N 0 1 N N N -14.788 18.213 -4.712 6.113 -1.184 -2.466 N CKD 35
CKD N1 N3 N 0 1 N N N -16.471 20.484 -4.966 4.685 -1.419 -0.085 N1 CKD 36
CKD C C30 C 0 1 N N N -16.235 18.126 -4.371 6.734 -1.871 -1.325 C CKD 37
CKD S S1 S 0 1 N N N -17.741 20.998 -5.871 4.254 -1.160 1.493 S CKD 38
CKD O O2 O 0 1 N N N -18.744 21.433 -4.949 4.077 0.243 1.635 O CKD 39
CKD O1 O3 O 0 1 N N N -17.216 21.912 -6.836 5.161 -1.914 2.286 O1 CKD 40
CKD C8 C31 C 0 1 Y N N -19.580 19.037 -6.344 2.556 -3.243 1.972 C8 CKD 41
CKD C6 C32 C 0 1 Y N N -19.349 17.387 -8.082 0.176 -3.027 2.103 C6 CKD 42
CKD C4 C33 C 0 1 Y N N -17.644 19.061 -7.791 1.531 -1.101 1.670 C4 CKD 43
CKD H1 H1 H 0 1 N N N -15.125 21.109 -6.436 3.458 -1.202 -1.781 H1 CKD 44
CKD H2 H2 H 0 1 N N N -17.585 17.526 -9.281 -0.602 -1.056 1.818 H2 CKD 45
CKD H3 H3 H 0 1 N N N -21.006 17.487 -6.734 1.225 -4.874 2.347 H3 CKD 46
CKD H4 H4 H 0 1 N N N -16.229 19.765 -2.988 6.087 -2.890 0.463 H4 CKD 47
CKD H5 H5 H 0 1 N N N -17.825 19.417 -3.735 5.123 -3.270 -0.986 H5 CKD 48
CKD H6 H6 H 0 1 N N N -14.248 21.009 -3.552 2.609 0.197 0.146 H6 CKD 49
CKD H7 H7 H 0 1 N N N -13.094 21.171 -4.918 4.031 1.249 -0.056 H7 CKD 50
CKD H8 H8 H 0 1 N N N -14.171 23.235 -5.641 3.349 1.662 -2.427 H8 CKD 51
CKD H9 H9 H 0 1 N N N -15.440 23.050 -4.383 1.891 0.677 -2.156 H9 CKD 52
CKD H10 H10 H 0 1 N N N -11.227 25.415 -1.043 0.125 5.603 0.375 H10 CKD 53
CKD H11 H11 H 0 1 N N N -9.994 22.121 -7.514 -3.903 0.876 -2.008 H11 CKD 54
CKD H12 H12 H 0 1 N N N -10.244 24.947 -9.964 -5.208 -0.562 -3.248 H12 CKD 55
CKD H13 H13 H 0 1 N N N -13.707 19.568 -8.404 -3.892 0.756 3.463 H13 CKD 56
CKD H14 H14 H 0 1 N N N -11.529 20.462 -7.661 -3.129 -0.383 1.418 H14 CKD 57
CKD H15 H15 H 0 1 N N N -14.655 23.342 -10.161 -6.105 3.529 1.088 H15 CKD 58
CKD H16 H16 H 0 1 N N N -12.484 24.240 -9.397 -5.340 2.387 -0.955 H16 CKD 59
CKD H17 H17 H 0 1 N N N -8.666 21.083 -9.087 -3.864 -1.819 0.600 H17 CKD 60
CKD H18 H18 H 0 1 N N N -7.427 21.103 -11.227 -5.088 -3.939 0.337 H18 CKD 61
CKD H19 H19 H 0 1 N N N -9.036 24.958 -12.120 -6.438 -2.679 -3.512 H19 CKD 62
CKD H20 H20 H 0 1 N N N -9.509 24.696 -7.367 -1.896 -0.632 -1.901 H20 CKD 63
CKD H21 H21 H 0 1 N N N -11.278 24.838 -7.640 -2.019 -0.613 -0.125 H21 CKD 64
CKD H22 H22 H 0 1 N N N -12.694 24.059 -6.061 0.372 0.406 -0.956 H22 CKD 65
CKD H23 H23 H 0 1 N N N -10.653 25.505 -3.437 -1.102 3.490 0.080 H23 CKD 66
CKD H24 H24 H 0 1 N N N -13.239 24.187 -0.292 2.496 5.753 -0.266 H24 CKD 67
CKD H25 H25 H 0 1 N N N -15.019 18.814 -6.736 4.875 0.460 -2.890 H25 CKD 68
CKD H26 H26 H 0 1 N N N -13.445 19.251 -5.989 5.879 0.628 -1.429 H26 CKD 69
CKD H27 H27 H 0 1 N N N -14.467 17.308 -4.992 5.581 -1.829 -3.030 H27 CKD 70
CKD H29 H29 H 0 1 N N N -16.800 17.805 -5.259 7.316 -1.156 -0.743 H29 CKD 71
CKD H30 H30 H 0 1 N N N -16.375 17.393 -3.562 7.389 -2.662 -1.690 H30 CKD 72
CKD H31 H31 H 0 1 N N N -20.137 19.459 -5.521 3.444 -3.857 2.021 H31 CKD 73
CKD H32 H32 H 0 1 N N N -19.731 16.525 -8.609 -0.797 -3.472 2.251 H32 CKD 74
CKD H33 H33 H 0 1 N N N -16.705 19.503 -8.089 1.616 -0.042 1.478 H33 CKD 75
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CKD F1 C24 SING N N 1
CKD C24 C23 DOUB Y N 2
CKD C24 C25 SING Y N 3
CKD C23 C22 SING Y N 4
CKD C25 C26 DOUB Y N 5
CKD C22 C21 DOUB Y N 6
CKD C26 C21 SING Y N 7
CKD F2 C30 SING N N 8
CKD C31 C30 DOUB Y N 9
CKD C31 C32 SING Y N 10
CKD C21 C20 SING N N 11
CKD C30 C29 SING Y N 12
CKD C32 C27 DOUB Y N 13
CKD C29 C28 DOUB Y N 14
CKD C27 C28 SING Y N 15
CKD C27 C20 SING N N 16
CKD C5 C6 DOUB Y N 17
CKD C5 C4 SING Y N 18
CKD C20 C19 SING N N 19
CKD C6 C7 SING Y N 20
CKD C4 C3 DOUB Y N 21
CKD C19 C18 SING N N 22
CKD C7 C8 DOUB Y N 23
CKD O1 S DOUB N N 24
CKD C3 C8 SING Y N 25
CKD C3 S SING N N 26
CKD S N1 SING N N 27
CKD S O DOUB N N 28
CKD C18 N2 SING N N 29
CKD C18 O2 DOUB N N 30
CKD C1 C2 SING N N 31
CKD C1 N SING N N 32
CKD C2 N1 SING N N 33
CKD C2 C10 SING N N 34
CKD N2 C13 SING N N 35
CKD N1 C9 SING N N 36
CKD N C SING N N 37
CKD C11 C10 SING N N 38
CKD C11 C12 SING N N 39
CKD C C9 SING N N 40
CKD C13 C12 DOUB Y N 41
CKD C13 C14 SING Y N 42
CKD C12 C17 SING Y N 43
CKD C14 C15 DOUB Y N 44
CKD C17 F SING N N 45
CKD C17 C16 DOUB Y N 46
CKD C15 C16 SING Y N 47
CKD C2 H1 SING N N 48
CKD C5 H2 SING N N 49
CKD C7 H3 SING N N 50
CKD C9 H4 SING N N 51
CKD C9 H5 SING N N 52
CKD C10 H6 SING N N 53
CKD C10 H7 SING N N 54
CKD C11 H8 SING N N 55
CKD C11 H9 SING N N 56
CKD C15 H10 SING N N 57
CKD C20 H11 SING N N 58
CKD C22 H12 SING N N 59
CKD C29 H13 SING N N 60
CKD C28 H14 SING N N 61
CKD C31 H15 SING N N 62
CKD C32 H16 SING N N 63
CKD C26 H17 SING N N 64
CKD C25 H18 SING N N 65
CKD C23 H19 SING N N 66
CKD C19 H20 SING N N 67
CKD C19 H21 SING N N 68
CKD N2 H22 SING N N 69
CKD C14 H23 SING N N 70
CKD C16 H24 SING N N 71
CKD C1 H25 SING N N 72
CKD C1 H26 SING N N 73
CKD N H27 SING N N 74
CKD C H29 SING N N 75
CKD C H30 SING N N 76
CKD C8 H31 SING N N 77
CKD C6 H32 SING N N 78
CKD C4 H33 SING N N 79
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CKD SMILES ACDLabs 12.01 "C1(N(CCNC1)S(c2ccccc2)(=O)=O)CCc3c(cccc3NC(=O)CC(c4ccc(cc4)F)c5ccc(F)cc5)F"
CKD InChI InChI 1.03 "InChI=1S/C33H32F3N3O3S/c34-25-13-9-23(10-14-25)30(24-11-15-26(35)16-12-24)21-33(40)38-32-8-4-7-31(36)29(32)18-17-27-22-37-19-20-39(27)43(41,42)28-5-2-1-3-6-28/h1-16,27,30,37H,17-22H2,(H,38,40)/t27-/m0/s1"
CKD InChIKey InChI 1.03 QQUFYXWRXCEMDE-MHZLTWQESA-N
CKD SMILES_CANONICAL CACTVS 3.385 "Fc1ccc(cc1)C(CC(=O)Nc2cccc(F)c2CC[C@H]3CNCCN3[S](=O)(=O)c4ccccc4)c5ccc(F)cc5"
CKD SMILES CACTVS 3.385 "Fc1ccc(cc1)C(CC(=O)Nc2cccc(F)c2CC[CH]3CNCCN3[S](=O)(=O)c4ccccc4)c5ccc(F)cc5"
CKD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)S(=O)(=O)N2CCNC[C@@H]2CCc3c(cccc3F)NC(=O)CC(c4ccc(cc4)F)c5ccc(cc5)F"
CKD SMILES "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)S(=O)(=O)N2CCNCC2CCc3c(cccc3F)NC(=O)CC(c4ccc(cc4)F)c5ccc(cc5)F"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
CKD "SYSTEMATIC NAME" ACDLabs 12.01 "3,3-bis(4-fluorophenyl)-N-(3-fluoro-2-{2-[(2S)-1-(phenylsulfonyl)piperazin-2-yl]ethyl}phenyl)propanamide"
CKD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}-[3-fluoranyl-2-[2-[(2~{S})-1-(phenylsulfonyl)piperazin-2-yl]ethyl]phenyl]-3,3-bis(4-fluorophenyl)propanamide"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CKD "Create component" 2017-09-27 RCSB
CKD "Initial release" 2018-01-03 RCSB
#