data_CMX # _chem_comp.id CMX _chem_comp.name "CARBOXYMETHYLDETHIA COENZYME *A" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAC _chem_comp.formula "C23 H38 N7 O18 P3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 793.505 _chem_comp.one_letter_code ? _chem_comp.three_letter_code CMX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1CSI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal CMX N1A AN1 N 0 1 Y N N 19.521 -8.093 13.346 5.933 1.918 -7.757 N1A CMX 1 CMX C2A AC2 C 0 1 Y N N 18.980 -8.660 14.407 4.781 1.854 -8.398 C2A CMX 2 CMX N3A AN3 N 0 1 Y N N 18.156 -9.698 14.467 3.660 1.501 -7.804 N3A CMX 3 CMX C4A AC4 C 0 1 Y N N 17.902 -10.188 13.242 3.648 1.185 -6.513 C4A CMX 4 CMX C5A AC5 C 0 1 Y N N 18.402 -9.740 12.042 4.849 1.243 -5.785 C5A CMX 5 CMX C6A AC6 C 0 1 Y N N 19.265 -8.633 12.104 6.018 1.625 -6.463 C6A CMX 6 CMX N6A AN6 N 0 1 N N N 19.800 -8.047 11.053 7.231 1.695 -5.799 N6A CMX 7 CMX N7A AN7 N 0 1 Y N N 17.876 -10.504 10.989 4.560 0.885 -4.510 N7A CMX 8 CMX C8A AC8 C 0 1 Y N N 17.122 -11.401 11.569 3.289 0.622 -4.412 C8A CMX 9 CMX N9A AN9 N 0 1 Y N N 17.107 -11.282 12.948 2.682 0.796 -5.620 N9A CMX 10 CMX C1B AC1* C 0 1 N N R 16.234 -12.115 13.787 1.261 0.597 -5.912 C1B CMX 11 CMX C2B AC2* C 0 1 N N R 14.809 -11.836 13.315 0.971 -0.887 -6.246 C2B CMX 12 CMX O2B AO2* O 0 1 N N N 14.359 -10.539 13.631 1.192 -1.152 -7.632 O2B CMX 13 CMX C3B AC3* C 0 1 N N S 14.074 -12.983 13.977 -0.534 -1.012 -5.893 C3B CMX 14 CMX O3B AO3* O 0 1 N N N 14.046 -12.778 15.399 -1.335 -0.889 -7.070 O3B CMX 15 CMX P3B AP3* P 0 1 N N N 12.713 -13.127 16.254 -2.195 -2.244 -7.191 P3B CMX 16 CMX O7A AO7 O 0 1 N N N 11.552 -12.456 15.650 -3.047 -2.397 -5.990 O7A CMX 17 CMX O8A AO8 O 0 1 N N N 12.970 -12.869 17.690 -3.126 -2.174 -8.503 O8A CMX 18 CMX O9A AO9 O 0 1 N N N 12.563 -14.599 16.016 -1.199 -3.504 -7.306 O9A CMX 19 CMX C4B AC4* C 0 1 N N R 15.049 -14.135 13.670 -0.791 0.164 -4.932 C4B CMX 20 CMX O4B AO4* O 0 1 N N N 16.334 -13.508 13.466 0.461 0.841 -4.735 O4B CMX 21 CMX C5B AC5* C 0 1 N N N 14.702 -14.898 12.416 -1.314 -0.361 -3.594 C5B CMX 22 CMX O5B AO5* O 0 1 N N N 14.391 -13.930 11.419 -1.543 0.735 -2.707 O5B CMX 23 CMX P1A AP1 P 0 1 N N S 14.737 -14.377 9.931 -2.089 0.112 -1.327 P1A CMX 24 CMX O1A AO1 O 0 1 N N N 13.916 -15.513 9.466 -1.077 -0.812 -0.769 O1A CMX 25 CMX O2A AO2 O 0 1 N N N 16.219 -14.580 9.845 -3.455 -0.692 -1.605 O2A CMX 26 CMX O3A AO3 O 0 1 N N N 14.474 -13.011 9.132 -2.369 1.299 -0.276 O3A CMX 27 CMX P2A AP2 P 0 1 N N S 13.044 -12.674 8.445 -2.910 0.608 1.073 P2A CMX 28 CMX O4A AO4 O 0 1 N N N 12.944 -13.332 7.139 -4.153 -0.139 0.780 O4A CMX 29 CMX O5A AO5 O 0 1 N N N 11.967 -12.725 9.437 -1.795 -0.406 1.640 O5A CMX 30 CMX O6A AO6 O 0 1 N N N 13.357 -11.084 8.214 -3.212 1.743 2.174 O6A CMX 31 CMX CBP PC11 C 0 1 N N N 14.702 -9.203 7.551 -3.994 2.098 4.433 CBP CMX 32 CMX CCP PC12 C 0 1 N N N 14.210 -10.603 7.177 -3.686 1.070 3.342 CCP CMX 33 CMX CDP PC13 C 0 1 N N N 15.393 -8.582 6.320 -2.721 2.876 4.774 CDP CMX 34 CMX CEP PC14 C 0 1 N N N 13.436 -8.399 7.940 -5.066 3.067 3.932 CEP CMX 35 CMX CAP PC10 C 0 1 N N R 15.638 -9.345 8.763 -4.501 1.377 5.684 CAP CMX 36 CMX OAP PO10 O 0 1 N N N 16.855 -10.005 8.419 -5.760 0.763 5.402 OAP CMX 37 CMX C9P PC9 C 0 1 N N N 15.986 -7.985 9.394 -3.507 0.320 6.092 C9P CMX 38 CMX O9P PO9 O 0 1 N N N 15.297 -7.462 10.286 -3.778 -0.853 5.951 O9P CMX 39 CMX N8P PN8 N 0 1 N N N 17.082 -7.400 8.953 -2.318 0.680 6.615 N8P CMX 40 CMX C7P PC7 C 0 1 N N N 17.530 -6.067 9.425 -1.385 -0.345 7.087 C7P CMX 41 CMX C6P PC6 C 0 1 N N N 16.775 -5.000 8.638 -0.121 0.324 7.629 C6P CMX 42 CMX C5P PC5 C 0 1 N N N 17.235 -4.838 7.196 0.838 -0.731 8.115 C5P CMX 43 CMX O5P PO5 O 0 1 N N N 18.452 -4.813 6.918 0.540 -1.904 8.035 O5P CMX 44 CMX N4P PN4 N 0 1 N N N 16.285 -4.667 6.264 2.027 -0.371 8.637 N4P CMX 45 CMX C3P PC3 C 0 1 N N N 16.686 -4.448 4.879 2.960 -1.397 9.109 C3P CMX 46 CMX C2P PC2 C 0 1 N N N 16.385 -5.653 3.961 4.224 -0.727 9.651 C2P CMX 47 CMX C1 C1 C 0 1 N N N 16.614 -5.373 2.421 5.198 -1.799 10.144 C1 CMX 48 CMX C2 C2 C 0 1 N N N 15.588 -4.418 1.915 6.443 -1.138 10.678 C2 CMX 49 CMX O21 O21 O 0 1 N N N 14.410 -4.681 1.887 6.541 0.065 10.665 O21 CMX 50 CMX O22 O22 O 0 1 N N N 16.032 -3.275 1.548 7.443 -1.888 11.167 O22 CMX 51 CMX H2A AH2 H 0 1 N N N 19.253 -8.205 15.373 4.757 2.101 -9.449 H2A CMX 52 CMX H61A AH61 H 0 0 N N N 19.610 -8.446 10.133 8.031 1.960 -6.279 H61A CMX 53 CMX H62A AH62 H 0 0 N N N 20.808 -7.978 11.186 7.280 1.478 -4.855 H62A CMX 54 CMX H8A AH8 H 0 1 N N N 16.574 -12.153 10.977 2.789 0.311 -3.506 H8A CMX 55 CMX H1B AH1* H 0 1 N N N 16.493 -11.900 14.850 0.945 1.243 -6.731 H1B CMX 56 CMX H2B AH2* H 0 1 N N N 14.662 -11.814 12.209 1.573 -1.550 -5.624 H2B CMX 57 CMX HO2A AHO2 H 0 0 N N N 13.472 -10.365 13.337 2.126 -0.968 -7.806 HO2A CMX 58 CMX H3B AH3* H 0 1 N N N 13.021 -13.128 13.638 -0.732 -1.961 -5.395 H3B CMX 59 CMX HOA8 8HOA H 0 0 N N N 12.189 -13.073 18.190 -3.623 -3.003 -8.538 HOA8 CMX 60 CMX HOA9 9HOA H 0 0 N N N 11.782 -14.803 16.516 -0.664 -3.365 -8.100 HOA9 CMX 61 CMX H4B AH4* H 0 1 N N N 15.020 -14.868 14.509 -1.517 0.849 -5.370 H4B CMX 62 CMX H51A AH51 H 0 0 N N N 15.498 -15.612 12.101 -0.578 -1.035 -3.156 H51A CMX 63 CMX H52A AH52 H 0 0 N N N 13.891 -15.648 12.568 -2.249 -0.899 -3.755 H52A CMX 64 CMX HOA2 2HOA H 0 0 N N N 16.425 -14.846 8.956 -4.086 -0.054 -1.967 HOA2 CMX 65 CMX HOA5 5HOA H 0 0 N N N 11.129 -12.527 9.034 -1.003 0.119 1.817 HOA5 CMX 66 CMX H121 1H12 H 0 0 N N N 15.048 -11.303 6.956 -2.922 0.379 3.698 H121 CMX 67 CMX H122 2H12 H 0 0 N N N 13.719 -10.628 6.176 -4.592 0.515 3.099 H122 CMX 68 CMX H131 1H13 H 0 0 N N N 15.751 -7.562 6.592 -1.920 2.176 5.011 H131 CMX 69 CMX H132 2H13 H 0 0 N N N 16.206 -9.227 5.915 -2.429 3.487 3.919 H132 CMX 70 CMX H133 3H13 H 0 0 N N N 14.737 -8.578 5.417 -2.908 3.519 5.633 H133 CMX 71 CMX H141 1H14 H 0 0 N N N 13.794 -7.379 8.212 -5.993 2.523 3.754 H141 CMX 72 CMX H142 2H14 H 0 0 N N N 12.648 -8.398 7.150 -5.237 3.839 4.683 H142 CMX 73 CMX H143 3H14 H 0 0 N N N 12.826 -8.885 8.737 -4.732 3.531 3.004 H143 CMX 74 CMX H10 H10 H 0 1 N N N 15.074 -9.959 9.503 -4.621 2.096 6.494 H10 CMX 75 CMX HO1 HO1 H 0 1 N N N 17.433 -10.092 9.167 -5.610 0.136 4.681 HO1 CMX 76 CMX HN8 HN8 H 0 1 N N N 17.572 -7.966 8.261 -2.080 1.618 6.678 HN8 CMX 77 CMX H71 1H7 H 0 1 N N N 17.421 -5.943 10.527 -1.856 -0.927 7.879 H71 CMX 78 CMX H72 2H7 H 0 1 N N N 18.636 -5.940 9.366 -1.121 -1.005 6.260 H72 CMX 79 CMX H61 1H6 H 0 1 N N N 15.677 -5.192 8.676 0.349 0.906 6.836 H61 CMX 80 CMX H62 2H6 H 0 1 N N N 16.816 -4.021 9.171 -0.385 0.983 8.456 H62 CMX 81 CMX HN4 HN4 H 0 1 N N N 15.318 -4.701 6.588 2.265 0.566 8.700 HN4 CMX 82 CMX H31 1H3 H 0 1 N N N 16.225 -3.516 4.475 2.489 -1.979 9.902 H31 CMX 83 CMX H32 2H3 H 0 1 N N N 17.761 -4.161 4.818 3.224 -2.057 8.282 H32 CMX 84 CMX H21 1H2 H 0 1 N N N 16.969 -6.545 4.285 4.694 -0.145 8.859 H21 CMX 85 CMX H22 2H2 H 0 1 N N N 15.350 -6.028 4.138 3.960 -0.068 10.478 H22 CMX 86 CMX H11 1H1 H 0 1 N N N 17.650 -5.021 2.210 4.727 -2.381 10.936 H11 CMX 87 CMX H12 2H1 H 0 1 N N N 16.636 -6.315 1.824 5.462 -2.458 9.317 H12 CMX 88 CMX HO2 HO2 H 0 1 N N N 15.377 -2.666 1.225 8.242 -1.464 11.509 HO2 CMX 89 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal CMX N1A C2A SING Y N 1 CMX N1A C6A DOUB Y N 2 CMX C2A N3A DOUB Y N 3 CMX C2A H2A SING N N 4 CMX N3A C4A SING Y N 5 CMX C4A C5A DOUB Y N 6 CMX C4A N9A SING Y N 7 CMX C5A C6A SING Y N 8 CMX C5A N7A SING Y N 9 CMX C6A N6A SING N N 10 CMX N6A H61A SING N N 11 CMX N6A H62A SING N N 12 CMX N7A C8A DOUB Y N 13 CMX C8A N9A SING Y N 14 CMX C8A H8A SING N N 15 CMX N9A C1B SING N N 16 CMX C1B C2B SING N N 17 CMX C1B O4B SING N N 18 CMX C1B H1B SING N N 19 CMX C2B O2B SING N N 20 CMX C2B C3B SING N N 21 CMX C2B H2B SING N N 22 CMX O2B HO2A SING N N 23 CMX C3B O3B SING N N 24 CMX C3B C4B SING N N 25 CMX C3B H3B SING N N 26 CMX O3B P3B SING N N 27 CMX P3B O7A DOUB N N 28 CMX P3B O8A SING N N 29 CMX P3B O9A SING N N 30 CMX O8A HOA8 SING N N 31 CMX O9A HOA9 SING N N 32 CMX C4B O4B SING N N 33 CMX C4B C5B SING N N 34 CMX C4B H4B SING N N 35 CMX C5B O5B SING N N 36 CMX C5B H51A SING N N 37 CMX C5B H52A SING N N 38 CMX O5B P1A SING N N 39 CMX P1A O1A DOUB N N 40 CMX P1A O2A SING N N 41 CMX P1A O3A SING N N 42 CMX O2A HOA2 SING N N 43 CMX O3A P2A SING N N 44 CMX P2A O4A DOUB N N 45 CMX P2A O5A SING N N 46 CMX P2A O6A SING N N 47 CMX O5A HOA5 SING N N 48 CMX O6A CCP SING N N 49 CMX CBP CCP SING N N 50 CMX CBP CDP SING N N 51 CMX CBP CEP SING N N 52 CMX CBP CAP SING N N 53 CMX CCP H121 SING N N 54 CMX CCP H122 SING N N 55 CMX CDP H131 SING N N 56 CMX CDP H132 SING N N 57 CMX CDP H133 SING N N 58 CMX CEP H141 SING N N 59 CMX CEP H142 SING N N 60 CMX CEP H143 SING N N 61 CMX CAP OAP SING N N 62 CMX CAP C9P SING N N 63 CMX CAP H10 SING N N 64 CMX OAP HO1 SING N N 65 CMX C9P O9P DOUB N N 66 CMX C9P N8P SING N N 67 CMX N8P C7P SING N N 68 CMX N8P HN8 SING N N 69 CMX C7P C6P SING N N 70 CMX C7P H71 SING N N 71 CMX C7P H72 SING N N 72 CMX C6P C5P SING N N 73 CMX C6P H61 SING N N 74 CMX C6P H62 SING N N 75 CMX C5P O5P DOUB N N 76 CMX C5P N4P SING N N 77 CMX N4P C3P SING N N 78 CMX N4P HN4 SING N N 79 CMX C3P C2P SING N N 80 CMX C3P H31 SING N N 81 CMX C3P H32 SING N N 82 CMX C2P C1 SING N N 83 CMX C2P H21 SING N N 84 CMX C2P H22 SING N N 85 CMX C1 C2 SING N N 86 CMX C1 H11 SING N N 87 CMX C1 H12 SING N N 88 CMX C2 O21 DOUB N N 89 CMX C2 O22 SING N N 90 CMX O22 HO2 SING N N 91 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor CMX SMILES ACDLabs 10.04 "O=C(O)CCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3OP(=O)(O)O" CMX SMILES_CANONICAL CACTVS 3.341 "CC(C)(CO[P@@](O)(=O)O[P@](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[C@@H](O)C(=O)NCCC(=O)NCCCC(O)=O" CMX SMILES CACTVS 3.341 "CC(C)(CO[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[CH](O)C(=O)NCCC(=O)NCCCC(O)=O" CMX SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(C)(CO[P@](=O)(O)O[P@@](=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)[C@H](C(=O)NCCC(=O)NCCCC(=O)O)O" CMX SMILES "OpenEye OEToolkits" 1.5.0 "CC(C)(COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)C(C(=O)NCCC(=O)NCCCC(=O)O)O" CMX InChI InChI 1.03 ;InChI=1S/C23H38N7O18P3/c1-23(2,18(35)21(36)26-7-5-13(31)25-6-3-4-14(32)33)9-45-51(42,43)48-50(40,41)44-8-12-17(47-49(37,38)39)16(34)22(46-12)30-11-29-15-19(24)27-10-28-20(15)30/h10-12,16-18,22,34-35H,3-9H2,1-2H3,(H,25,31)(H,26,36)(H,32,33)(H,40,41)(H,42,43)(H2,24,27,28)(H2,37,38,39)/t12-,16-,17-,18+,22-/m1/s1 ; CMX InChIKey InChI 1.03 SKRDARVCOPFVCP-GRFIIANRSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier CMX "SYSTEMATIC NAME" ACDLabs 10.04 "(3S,5S,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3,5-diphosphanonadecan-19-oic acid 3,5-dioxide (non-preferred name)" CMX "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "4-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-3-phosphonooxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxy-2-hydroxy-3,3-dimethyl-butanoyl]amino]propanoylamino]butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site CMX "Create component" 1999-07-08 EBI CMX "Modify descriptor" 2011-06-04 RCSB #