data_CRT # _chem_comp.id CRT _chem_comp.name SPIRILLOXANTHIN _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C42 H60 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms RHODOVIOLASCIN _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 596.925 _chem_comp.one_letter_code ? _chem_comp.three_letter_code CRT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1EYS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal CRT C1M C1M C 0 1 N N N -0.813 -2.328 48.165 -2.369 -0.870 16.746 C1M CRT 1 CRT O1 O1 O 0 1 N N N -0.045 -1.378 48.881 -2.534 0.086 15.697 O1 CRT 2 CRT C1 C1 C 0 1 N N N 1.100 -1.874 49.616 -3.539 -0.429 14.822 C1 CRT 3 CRT C2 C2 C 0 1 N N N 2.146 -2.531 48.704 -3.077 -1.770 14.249 C2 CRT 4 CRT C3 C3 C 0 1 N N N 0.687 -2.883 50.692 -4.840 -0.629 15.602 C3 CRT 5 CRT C4 C4 C 0 1 N N N 1.699 -0.600 50.309 -3.776 0.559 13.679 C4 CRT 6 CRT C5 C5 C 0 1 N N N 2.257 0.479 49.371 -2.495 0.755 12.911 C5 CRT 7 CRT C6 C6 C 0 1 N N N 1.411 1.760 49.435 -2.442 0.453 11.610 C6 CRT 8 CRT C7 C7 C 0 1 N N N 1.574 2.761 48.335 -1.237 0.638 10.888 C7 CRT 9 CRT C8 C8 C 0 1 N N N 2.066 2.307 47.015 -0.014 1.176 11.586 C8 CRT 10 CRT C9 C9 C 0 1 N N N 1.240 4.060 48.585 -1.183 0.330 9.565 C9 CRT 11 CRT C10 C10 C 0 1 N N N 1.309 5.148 47.656 0.039 0.400 8.876 C10 CRT 12 CRT C11 C11 C 0 1 N N N 0.896 6.451 48.062 0.076 0.194 7.527 C11 CRT 13 CRT C12 C12 C 0 1 N N N 0.907 7.644 47.290 1.295 0.264 6.840 C12 CRT 14 CRT C13 C13 C 0 1 N N N 1.403 7.645 45.896 2.566 0.566 7.591 C13 CRT 15 CRT C14 C14 C 0 1 N N N 0.438 8.815 47.911 1.332 0.056 5.478 C14 CRT 16 CRT C15 C15 C 0 1 N N N 0.419 10.121 47.368 2.556 0.075 4.801 C15 CRT 17 CRT C16 C16 C 0 1 N N N -0.073 11.227 48.142 2.584 -0.030 3.426 C16 CRT 18 CRT C17 C17 C 0 1 N N N -0.174 12.562 47.704 3.807 -0.012 2.749 C17 CRT 19 CRT C18 C18 C 0 1 N N N 0.360 12.941 46.382 5.094 0.123 3.521 C18 CRT 20 CRT C19 C19 C 0 1 N N N -0.793 13.515 48.554 3.836 -0.118 1.373 C19 CRT 21 CRT C20 C20 C 0 1 N N N -0.949 14.873 48.243 5.054 -0.045 0.692 C20 CRT 22 CRT C21 C21 C 0 1 N N N -1.507 15.783 49.073 5.073 -0.037 -0.688 C21 CRT 23 CRT C22 C22 C 0 1 N N N -2.148 15.449 50.285 3.875 -0.102 -1.404 C22 CRT 24 CRT C23 C23 C 0 1 N N N -2.656 16.376 51.239 3.894 -0.094 -2.784 C23 CRT 25 CRT C24 C24 C 0 1 N N N -2.426 17.832 51.112 5.208 -0.015 -3.518 C24 CRT 26 CRT C25 C25 C 0 1 N N N -3.415 15.867 52.306 2.696 -0.160 -3.500 C25 CRT 27 CRT C26 C26 C 0 1 N N N -3.468 16.372 53.632 2.707 -0.051 -4.875 C26 CRT 28 CRT C27 C27 C 0 1 N N N -4.268 15.736 54.602 1.528 -0.245 -5.602 C27 CRT 29 CRT C28 C28 C 0 1 N N N -4.406 16.119 55.938 1.539 -0.137 -6.975 C28 CRT 30 CRT C29 C29 C 0 1 N N N -3.665 17.298 56.447 2.822 0.190 -7.695 C29 CRT 31 CRT C30 C30 C 0 1 N N N -5.267 15.363 56.768 0.358 -0.330 -7.703 C30 CRT 32 CRT C31 C31 C 0 1 N N N -5.454 15.474 58.187 0.386 -0.311 -9.068 C31 CRT 33 CRT C32 C32 C 0 1 N N N -6.435 14.668 58.875 -0.781 -0.589 -9.799 C32 CRT 34 CRT C33 C33 C 0 1 N N N -6.695 14.654 60.234 -0.753 -0.570 -11.158 C33 CRT 35 CRT C34 C34 C 0 1 N N N -5.990 15.514 61.217 0.529 -0.249 -11.881 C34 CRT 36 CRT C35 C35 C 0 1 N N N -7.723 13.715 60.730 -1.930 -0.851 -11.896 C35 CRT 37 CRT C36 C36 C 0 1 N N N -8.192 13.877 62.172 -1.926 -0.742 -13.228 C36 CRT 38 CRT C37 C37 C 0 1 N N N -9.265 12.836 62.456 -3.135 -1.168 -14.022 C37 CRT 39 CRT C38 C38 C 0 1 N N N -10.437 13.272 63.366 -3.674 0.027 -14.809 C38 CRT 40 CRT C39 C39 C 0 1 N N N -11.516 12.172 63.324 -2.593 0.541 -15.762 C39 CRT 41 CRT C40 C40 C 0 1 N N N -9.961 13.420 64.823 -4.901 -0.404 -15.615 C40 CRT 42 CRT O2 O2 O 0 1 N N N -10.885 14.518 62.795 -4.043 1.068 -13.901 O2 CRT 43 CRT C2M C2M C 0 1 N N N -12.010 15.139 63.428 -4.480 2.172 -14.695 C2M CRT 44 CRT H1M1 1H1M H 0 0 N N N -1.694 -1.946 47.599 -2.046 -1.821 16.323 H1M1 CRT 45 CRT H1M2 2H1M H 0 0 N N N -0.148 -2.899 47.475 -1.618 -0.511 17.450 H1M2 CRT 46 CRT H1M3 3H1M H 0 0 N N N -1.139 -3.139 48.857 -3.318 -1.007 17.265 H1M3 CRT 47 CRT H21A 1H2 H 0 0 N N N 3.027 -2.912 49.269 -2.086 -1.656 13.809 H21A CRT 48 CRT H22A 2H2 H 0 0 N N N 1.687 -3.336 48.084 -3.037 -2.512 15.047 H22A CRT 49 CRT H23 3H2 H 0 1 N N N 2.461 -1.836 47.890 -3.779 -2.099 13.483 H23 CRT 50 CRT H31A 1H3 H 0 0 N N N 1.568 -3.264 51.257 -5.098 0.293 16.121 H31A CRT 51 CRT H32A 2H3 H 0 0 N N N -0.082 -2.455 51.376 -5.641 -0.893 14.911 H32A CRT 52 CRT H33 3H3 H 0 1 N N N 0.088 -3.718 50.258 -4.709 -1.430 16.329 H33 CRT 53 CRT H41 1H4 H 0 1 N N N 0.941 -0.150 50.993 -4.543 0.165 13.012 H41 CRT 54 CRT H42 2H4 H 0 1 N N N 2.480 -0.902 51.044 -4.105 1.514 14.088 H42 CRT 55 CRT H5 H5 H 0 1 N N N 3.148 0.350 48.734 -1.619 1.141 13.412 H5 CRT 56 CRT H6 H6 H 0 1 N N N 0.700 1.957 50.255 -3.318 0.068 11.109 H6 CRT 57 CRT H81 1H8 H 0 1 N N N 2.187 3.053 46.195 0.585 0.346 11.960 H81 CRT 58 CRT H82 2H8 H 0 1 N N N 3.033 1.771 47.158 0.575 1.764 10.884 H82 CRT 59 CRT H83 3H8 H 0 1 N N N 1.410 1.480 46.653 -0.321 1.806 12.421 H83 CRT 60 CRT H9 H9 H 0 1 N N N 0.888 4.244 49.614 -2.080 0.032 9.043 H9 CRT 61 CRT H10 H10 H 0 1 N N N 1.679 4.982 46.630 0.950 0.617 9.414 H10 CRT 62 CRT H11 H11 H 0 1 N N N 0.523 6.547 49.095 -0.834 -0.021 6.989 H11 CRT 63 CRT H131 1H13 H 0 0 N N N 1.411 8.581 45.290 2.498 0.159 8.600 H131 CRT 64 CRT H132 2H13 H 0 0 N N N 2.434 7.222 45.895 3.411 0.112 7.072 H132 CRT 65 CRT H133 3H13 H 0 0 N N N 0.838 6.869 45.327 2.710 1.646 7.643 H133 CRT 66 CRT H14 H14 H 0 1 N N N 0.042 8.696 48.933 0.416 -0.120 4.934 H14 CRT 67 CRT H15 H15 H 0 1 N N N 0.788 10.277 46.340 3.478 0.172 5.354 H15 CRT 68 CRT H16 H16 H 0 1 N N N -0.406 11.031 49.175 1.662 -0.128 2.872 H16 CRT 69 CRT H181 1H18 H 0 0 N N N 0.280 13.997 46.035 4.902 0.649 4.456 H181 CRT 70 CRT H182 2H18 H 0 0 N N N 1.429 12.631 46.330 5.495 -0.866 3.736 H182 CRT 71 CRT H183 3H18 H 0 0 N N N -0.100 12.279 45.611 5.815 0.686 2.929 H183 CRT 72 CRT H19 H19 H 0 1 N N N -1.181 13.175 49.528 2.917 -0.258 0.823 H19 CRT 73 CRT H20 H20 H 0 1 N N N -0.605 15.256 47.267 5.980 0.005 1.245 H20 CRT 74 CRT H21 H21 H 0 1 N N N -1.436 16.835 48.749 6.014 0.019 -1.214 H21 CRT 75 CRT H22 H22 H 0 1 N N N -2.261 14.374 50.504 2.934 -0.159 -0.877 H22 CRT 76 CRT H241 1H24 H 0 0 N N N -2.823 18.557 51.859 5.031 -0.108 -4.590 H241 CRT 77 CRT H242 2H24 H 0 0 N N N -1.326 17.997 51.028 5.683 0.943 -3.310 H242 CRT 78 CRT H243 3H24 H 0 0 N N N -2.786 18.147 50.105 5.859 -0.823 -3.186 H243 CRT 79 CRT H25 H25 H 0 1 N N N -4.031 14.981 52.079 1.761 -0.296 -2.977 H25 CRT 80 CRT H26 H26 H 0 1 N N N -2.883 17.264 53.910 3.627 0.182 -5.391 H26 CRT 81 CRT H27 H27 H 0 1 N N N -4.843 14.850 54.283 0.608 -0.479 -5.086 H27 CRT 82 CRT H291 1H29 H 0 0 N N N -3.775 17.603 57.513 2.618 0.330 -8.756 H291 CRT 83 CRT H292 2H29 H 0 0 N N N -2.580 17.155 56.230 3.247 1.105 -7.282 H292 CRT 84 CRT H293 3H29 H 0 0 N N N -3.907 18.174 55.801 3.530 -0.629 -7.566 H293 CRT 85 CRT H30 H30 H 0 1 N N N -5.863 14.595 56.246 -0.574 -0.495 -7.185 H30 CRT 86 CRT H31 H31 H 0 1 N N N -4.835 16.188 58.756 1.305 -0.081 -9.586 H31 CRT 87 CRT H32 H32 H 0 1 N N N -7.064 13.976 58.289 -1.700 -0.819 -9.281 H32 CRT 88 CRT H341 1H34 H 0 0 N N N -6.199 15.502 62.312 0.344 -0.219 -12.955 H341 CRT 89 CRT H342 2H34 H 0 0 N N N -4.897 15.331 61.089 0.901 0.720 -11.549 H342 CRT 90 CRT H343 3H34 H 0 0 N N N -6.102 16.568 60.871 1.272 -1.017 -11.662 H343 CRT 91 CRT H35 H35 H 0 1 N N N -8.119 12.934 60.059 -2.830 -1.152 -11.381 H35 CRT 92 CRT H36 H36 H 0 1 N N N -7.816 14.624 62.891 -1.057 -0.350 -13.735 H36 CRT 93 CRT H371 1H37 H 0 0 N N N -9.666 12.442 61.493 -2.853 -1.961 -14.714 H371 CRT 94 CRT H372 2H37 H 0 0 N N N -8.791 11.916 62.872 -3.905 -1.534 -13.343 H372 CRT 95 CRT H391 1H39 H 0 0 N N N -12.361 12.486 63.980 -1.788 0.997 -15.185 H391 CRT 96 CRT H392 2H39 H 0 0 N N N -11.844 11.931 62.285 -2.196 -0.290 -16.344 H392 CRT 97 CRT H393 3H39 H 0 0 N N N -11.115 11.166 63.591 -3.024 1.282 -16.435 H393 CRT 98 CRT H401 1H40 H 0 0 N N N -10.806 13.734 65.479 -5.712 -0.660 -14.933 H401 CRT 99 CRT H402 2H40 H 0 0 N N N -9.470 12.490 65.195 -5.216 0.413 -16.263 H402 CRT 100 CRT H403 3H40 H 0 0 N N N -9.091 14.112 64.906 -4.649 -1.273 -16.223 H403 CRT 101 CRT H2M1 1H2M H 0 0 N N N -12.356 16.102 62.986 -4.777 2.994 -14.043 H2M1 CRT 102 CRT H2M2 2H2M H 0 0 N N N -12.860 14.419 63.474 -3.667 2.499 -15.343 H2M2 CRT 103 CRT H2M3 3H2M H 0 0 N N N -11.801 15.276 64.514 -5.331 1.868 -15.305 H2M3 CRT 104 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal CRT C1M O1 SING N N 1 CRT C1M H1M1 SING N N 2 CRT C1M H1M2 SING N N 3 CRT C1M H1M3 SING N N 4 CRT O1 C1 SING N N 5 CRT C1 C2 SING N N 6 CRT C1 C3 SING N N 7 CRT C1 C4 SING N N 8 CRT C2 H21A SING N N 9 CRT C2 H22A SING N N 10 CRT C2 H23 SING N N 11 CRT C3 H31A SING N N 12 CRT C3 H32A SING N N 13 CRT C3 H33 SING N N 14 CRT C4 C5 SING N N 15 CRT C4 H41 SING N N 16 CRT C4 H42 SING N N 17 CRT C5 C6 DOUB N E 18 CRT C5 H5 SING N N 19 CRT C6 C7 SING N N 20 CRT C6 H6 SING N N 21 CRT C7 C8 SING N N 22 CRT C7 C9 DOUB N E 23 CRT C8 H81 SING N N 24 CRT C8 H82 SING N N 25 CRT C8 H83 SING N N 26 CRT C9 C10 SING N N 27 CRT C9 H9 SING N N 28 CRT C10 C11 DOUB N E 29 CRT C10 H10 SING N N 30 CRT C11 C12 SING N N 31 CRT C11 H11 SING N N 32 CRT C12 C13 SING N N 33 CRT C12 C14 DOUB N E 34 CRT C13 H131 SING N N 35 CRT C13 H132 SING N N 36 CRT C13 H133 SING N N 37 CRT C14 C15 SING N N 38 CRT C14 H14 SING N N 39 CRT C15 C16 DOUB N E 40 CRT C15 H15 SING N N 41 CRT C16 C17 SING N N 42 CRT C16 H16 SING N N 43 CRT C17 C18 SING N N 44 CRT C17 C19 DOUB N E 45 CRT C18 H181 SING N N 46 CRT C18 H182 SING N N 47 CRT C18 H183 SING N N 48 CRT C19 C20 SING N N 49 CRT C19 H19 SING N N 50 CRT C20 C21 DOUB N Z 51 CRT C20 H20 SING N N 52 CRT C21 C22 SING N N 53 CRT C21 H21 SING N N 54 CRT C22 C23 DOUB N E 55 CRT C22 H22 SING N N 56 CRT C23 C24 SING N N 57 CRT C23 C25 SING N N 58 CRT C24 H241 SING N N 59 CRT C24 H242 SING N N 60 CRT C24 H243 SING N N 61 CRT C25 C26 DOUB N E 62 CRT C25 H25 SING N N 63 CRT C26 C27 SING N N 64 CRT C26 H26 SING N N 65 CRT C27 C28 DOUB N E 66 CRT C27 H27 SING N N 67 CRT C28 C29 SING N N 68 CRT C28 C30 SING N N 69 CRT C29 H291 SING N N 70 CRT C29 H292 SING N N 71 CRT C29 H293 SING N N 72 CRT C30 C31 DOUB N E 73 CRT C30 H30 SING N N 74 CRT C31 C32 SING N N 75 CRT C31 H31 SING N N 76 CRT C32 C33 DOUB N E 77 CRT C32 H32 SING N N 78 CRT C33 C34 SING N N 79 CRT C33 C35 SING N N 80 CRT C34 H341 SING N N 81 CRT C34 H342 SING N N 82 CRT C34 H343 SING N N 83 CRT C35 C36 DOUB N E 84 CRT C35 H35 SING N N 85 CRT C36 C37 SING N N 86 CRT C36 H36 SING N N 87 CRT C37 C38 SING N N 88 CRT C37 H371 SING N N 89 CRT C37 H372 SING N N 90 CRT C38 C39 SING N N 91 CRT C38 C40 SING N N 92 CRT C38 O2 SING N N 93 CRT C39 H391 SING N N 94 CRT C39 H392 SING N N 95 CRT C39 H393 SING N N 96 CRT C40 H401 SING N N 97 CRT C40 H402 SING N N 98 CRT C40 H403 SING N N 99 CRT O2 C2M SING N N 100 CRT C2M H2M1 SING N N 101 CRT C2M H2M2 SING N N 102 CRT C2M H2M3 SING N N 103 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor CRT SMILES ACDLabs 10.04 "O(C)C(C)(C)C/C=C/C(=C/C=C/C(=C/C=C/C(=C/C=C\C=C(\C=C\C=C(\C=C\C=C(\C=C\CC(OC)(C)C)C)C)C)C)C)C" CRT SMILES_CANONICAL CACTVS 3.341 "COC(C)(C)C\C=C\C(C)=C\C=C\C(C)=C\C=C\C(C)=C\C=C/C=C(C)/C=C/C=C(C)/C=C/C=C(C)/C=C/CC(C)(C)OC" CRT SMILES CACTVS 3.341 "COC(C)(C)CC=CC(C)=CC=CC(C)=CC=CC(C)=CC=CC=C(C)C=CC=C(C)C=CC=C(C)C=CCC(C)(C)OC" CRT SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C/C(=C\C=C\C(=C\C=C\C(=C\C=C/C=C(\C)/C=C/C=C(\C)/C=C/C=C(\C)/C=C/CC(C)(C)OC)\C)\C)/C=CCC(C)(C)OC" CRT SMILES "OpenEye OEToolkits" 1.5.0 "CC(=CC=CC(=CC=CC(=CC=CC=C(C)C=CC=C(C)C=CC=C(C)C=CCC(C)(C)OC)C)C)C=CCC(C)(C)OC" CRT InChI InChI 1.03 "InChI=1S/C42H60O2/c1-35(23-15-25-37(3)27-17-29-39(5)31-19-33-41(7,8)43-11)21-13-14-22-36(2)24-16-26-38(4)28-18-30-40(6)32-20-34-42(9,10)44-12/h13-32H,33-34H2,1-12H3/b14-13-,23-15+,24-16+,27-17+,28-18+,31-19+,32-20+,35-21+,36-22+,37-25+,38-26+,39-29+,40-30+" CRT InChIKey InChI 1.03 VAZQBTJCYODOSV-RISZBRKMSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier CRT "SYSTEMATIC NAME" ACDLabs 10.04 "(3E,3'E,15cis)-1,1'-dimethoxy-3,3',4,4'-tetradehydro-1,1',2,2'-tetrahydro-psi,psi-carotene" CRT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(6E,8E,10E,12E,14E,16Z,18E,20E,22E,24E,26E,28E)-2,31-dimethoxy-2,6,10,14,19,23,27,31-octamethyl-dotriaconta-4,6,8,10,12,14,16,18,20,22,24,26,28-tridecaene" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site CRT "Create component" 1999-07-08 RCSB CRT "Modify descriptor" 2011-06-04 RCSB CRT "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id CRT _pdbx_chem_comp_synonyms.name RHODOVIOLASCIN _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##