data_CTJ
#
_chem_comp.id CTJ
_chem_comp.name "1-({(2R)-2-[(1R)-1-{[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-{[(2-carboxypropan-2-yl)oxy]imino}acetyl]amino}-2-oxoethyl]-4-carboxy-3,6-dihydro-2H-1,3-thiazin-5-yl}methyl)pyridinium"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C22 H25 N6 O7 S2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 1
_chem_comp.pdbx_initial_date 2010-10-12
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 549.600
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code CTJ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3OCN
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CTJ C C C 0 1 N N N N N N 6.077 4.941 -16.697 -0.318 -1.461 -1.391 C CTJ 1
CTJ O O O 0 1 N N N N N N 6.136 5.338 -15.541 0.240 -0.908 -2.309 O CTJ 2
CTJ S1 S1 S 0 1 N N N N N N 5.287 1.033 -17.444 -1.871 0.897 -0.131 S1 CTJ 3
CTJ C2 C2 C 0 1 N N N N N N 3.618 0.717 -17.924 -3.397 1.225 0.802 C2 CTJ 4
CTJ C3 C3 C 0 1 N N N N N N 2.570 1.581 -17.244 -4.137 -0.064 1.015 C3 CTJ 5
CTJ C4 C4 C 0 1 N N N N N N 2.865 2.788 -16.744 -3.612 -1.266 0.966 C4 CTJ 6
CTJ N5 N5 N 0 1 N N N N N N 4.117 3.046 -16.401 -2.290 -1.595 0.693 N5 CTJ 7
CTJ C6 C6 C 0 1 N N R N N N 5.135 2.777 -17.399 -1.233 -0.573 0.736 C6 CTJ 8
CTJ CA CA C 0 1 N N R N N N 6.423 3.513 -17.019 0.021 -1.091 0.030 CA CTJ 9
CTJ N10 N10 N 0 1 N N N N N N 7.092 2.948 -15.862 1.049 -0.047 0.031 N10 CTJ 10
CTJ C11 C11 C 0 1 N N N N N N 8.059 2.042 -15.953 2.351 -0.383 -0.057 C11 CTJ 11
CTJ O12 O12 O 0 1 N N N N N N 8.454 1.564 -17.007 2.669 -1.543 -0.230 O12 CTJ 12
CTJ C13 C13 C 0 1 N N N N N N 8.638 1.642 -14.672 3.395 0.663 0.058 C13 CTJ 13
CTJ C14 C14 C 0 1 Y N N N N N 9.628 2.544 -14.014 3.008 2.087 0.150 C14 CTJ 14
CTJ C15 C15 C 0 1 Y N N N N N 10.010 3.784 -14.531 3.914 3.084 0.131 C15 CTJ 15
CTJ N16 N16 N 0 1 N N N N N N 8.268 0.486 -14.130 4.654 0.327 0.078 N16 CTJ 16
CTJ S16 S16 S 0 1 Y N N N N N 11.195 4.654 -13.593 3.053 4.616 0.262 S16 CTJ 17
CTJ C17 C17 C 0 1 Y N N N N N 11.122 3.285 -12.526 1.520 3.753 0.333 C17 CTJ 18
CTJ O17 O17 O 0 1 N N N N N N 7.439 -0.248 -14.730 5.030 -1.023 -0.126 O17 CTJ 19
CTJ C18 C18 C 0 1 N N N N N N 6.998 -1.484 -14.176 6.440 -1.247 -0.079 C18 CTJ 20
CTJ N18 N18 N 0 1 N N N N N N 11.881 3.240 -11.403 0.274 4.345 0.449 N18 CTJ 21
CTJ C19 C19 C 0 1 N N N N N N 6.221 -2.232 -15.248 7.125 -0.418 -1.167 C19 CTJ 22
CTJ N19 N19 N 0 1 Y N N N N N 10.287 2.272 -12.857 1.737 2.477 0.254 N19 CTJ 23
CTJ C20 C20 C 0 1 N N N N N N 6.107 -1.187 -12.975 6.977 -0.831 1.292 C20 CTJ 24
CTJ C21 C21 C 0 1 N N N N N N 8.184 -2.331 -13.759 6.724 -2.709 -0.307 C21 CTJ 25
CTJ O2A O2A O 0 1 N N N N N N 9.243 -2.264 -14.423 7.991 -3.155 -0.306 O2A CTJ 26
CTJ O2B O2B O 0 1 N N N N N N 8.071 -3.078 -12.764 5.813 -3.480 -0.492 O2B CTJ 27
CTJ "C3'" "C3'" C 0 1 N N N N N N 1.168 1.037 -17.166 -5.612 0.030 1.313 "C3'" CTJ 28
CTJ "C4'" "C4'" C 0 1 N N N N N N 1.903 3.871 -16.600 -4.526 -2.393 1.228 "C4'" CTJ 29
CTJ O4A O4A O 0 1 N N N N N N 1.003 3.833 -15.726 -4.936 -2.649 2.487 O4A CTJ 30
CTJ O4B O4B O 0 1 N N N N N N 2.031 4.834 -17.377 -4.911 -3.090 0.310 O4B CTJ 31
CTJ H H H 0 1 N N N N N N 5.777 5.615 -17.485 -1.064 -2.216 -1.589 H CTJ 32
CTJ H2 H2 H 0 1 N N N N N N 3.545 0.897 -19.007 -3.146 1.664 1.768 H2 CTJ 33
CTJ H2A H2A H 0 1 N N N N N N 3.395 -0.331 -17.677 -4.025 1.916 0.241 H2A CTJ 34
CTJ HN5 HN5 H 0 1 N N N N N N 4.168 4.021 -16.184 -2.061 -2.511 0.472 HN5 CTJ 35
CTJ H6 H6 H 0 1 N N N N N N 4.885 3.142 -18.406 -1.001 -0.323 1.771 H6 CTJ 36
CTJ HA HA H 0 1 N N N N N N 7.108 3.424 -17.875 0.396 -1.970 0.554 HA CTJ 37
CTJ HN10 HN10 H 0 0 N N N N N N 6.812 3.255 -14.953 0.791 0.886 0.094 HN10 CTJ 38
CTJ H15 H15 H 0 1 N N N N N N 9.599 4.177 -15.449 4.984 2.965 0.049 H15 CTJ 39
CTJ HN18 HN18 H 0 0 N N N N N N 12.428 4.075 -11.336 0.199 5.311 0.499 HN18 CTJ 40
CTJ HN1A HN1A H 0 0 N N N N N N 11.287 3.166 -10.602 -0.524 3.795 0.481 HN1A CTJ 41
CTJ H19 H19 H 0 1 N N N N N N 5.869 -3.192 -14.844 6.919 0.640 -1.002 H19 CTJ 42
CTJ H19A H19A H 0 0 N N N N N N 5.357 -1.628 -15.563 8.201 -0.589 -1.131 H19A CTJ 43
CTJ H19B H19B H 0 0 N N N N N N 6.875 -2.416 -16.113 6.743 -0.714 -2.144 H19B CTJ 44
CTJ H20 H20 H 0 1 N N N N N N 5.757 -2.132 -12.535 6.489 -1.422 2.068 H20 CTJ 45
CTJ H20A H20A H 0 0 N N N N N N 6.680 -0.623 -12.224 8.052 -1.002 1.329 H20A CTJ 46
CTJ H20B H20B H 0 0 N N N N N N 5.241 -0.591 -13.299 6.771 0.227 1.458 H20B CTJ 47
CTJ HO2A HO2A H 0 0 N N N N N N 9.890 -2.849 -14.047 8.123 -4.101 -0.456 HO2A CTJ 48
CTJ "H3'" "H3'" H 0 1 N N N N N N 0.781 1.421 -16.210 -5.932 -0.865 1.847 "H3'" CTJ 49
CTJ "H3'A" "H3'A" H 0 0 N N N N N N 0.667 1.452 -18.053 -5.802 0.909 1.930 "H3'A" CTJ 50
CTJ HO4A HO4A H 0 0 N N N N N N 0.481 4.625 -15.774 -5.535 -3.398 2.609 HO4A CTJ 51
CTJ N6 N6 N 1 1 Y N N N N N 0.769 -0.451 -17.166 -6.357 0.144 0.057 N6 CTJ 52
CTJ C26 C26 C 0 1 Y N N N N N -0.564 -1.220 -17.166 -6.880 -0.941 -0.479 C26 CTJ 53
CTJ C25 C25 C 0 1 Y N N N N N -0.564 -2.761 -17.166 -7.590 -0.873 -1.663 C25 CTJ 54
CTJ C24 C24 C 0 1 Y N N N N N 0.769 -3.531 -17.166 -7.749 0.356 -2.286 C24 CTJ 55
CTJ C23 C23 C 0 1 Y N N N N N 2.103 -2.761 -17.166 -7.185 1.474 -1.691 C23 CTJ 56
CTJ C22 C22 C 0 1 Y N N N N N 2.103 -1.220 -17.166 -6.492 1.329 -0.504 C22 CTJ 57
CTJ H26 H26 H 0 1 N N N N N N -1.499 -0.680 -17.166 -6.752 -1.895 0.012 H26 CTJ 58
CTJ H25 H25 H 0 1 N N N N N N -1.499 -3.301 -17.166 -8.015 -1.765 -2.098 H25 CTJ 59
CTJ H24 H24 H 0 1 N N N N N N 0.769 -4.611 -17.166 -8.298 0.440 -3.212 H24 CTJ 60
CTJ H23 H23 H 0 1 N N N N N N 3.038 -3.301 -17.166 -7.288 2.447 -2.149 H23 CTJ 61
CTJ H22 H22 H 0 1 N N N N N N 3.038 -0.680 -17.166 -6.053 2.196 -0.033 H22 CTJ 62
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CTJ C O DOUB N N 1
CTJ C CA SING N N 2
CTJ C H SING N N 3
CTJ S1 C2 SING N N 4
CTJ S1 C6 SING N N 5
CTJ C2 C3 SING N N 6
CTJ C2 H2 SING N N 7
CTJ C2 H2A SING N N 8
CTJ C3 C4 DOUB N N 9
CTJ C3 "C3'" SING N N 10
CTJ C4 N5 SING N N 11
CTJ C4 "C4'" SING N N 12
CTJ N5 C6 SING N N 13
CTJ N5 HN5 SING N N 14
CTJ C6 CA SING N N 15
CTJ C6 H6 SING N N 16
CTJ CA N10 SING N N 17
CTJ CA HA SING N N 18
CTJ N10 C11 SING N N 19
CTJ N10 HN10 SING N N 20
CTJ C11 O12 DOUB N N 21
CTJ C11 C13 SING N N 22
CTJ C13 C14 SING N N 23
CTJ C13 N16 DOUB N Z 24
CTJ C14 C15 DOUB Y N 25
CTJ C14 N19 SING Y N 26
CTJ C15 S16 SING Y N 27
CTJ C15 H15 SING N N 28
CTJ N16 O17 SING N N 29
CTJ S16 C17 SING Y N 30
CTJ C17 N18 SING N N 31
CTJ C17 N19 DOUB Y N 32
CTJ O17 C18 SING N N 33
CTJ C18 C19 SING N N 34
CTJ C18 C20 SING N N 35
CTJ C18 C21 SING N N 36
CTJ N18 HN18 SING N N 37
CTJ N18 HN1A SING N N 38
CTJ C19 H19 SING N N 39
CTJ C19 H19A SING N N 40
CTJ C19 H19B SING N N 41
CTJ C20 H20 SING N N 42
CTJ C20 H20A SING N N 43
CTJ C20 H20B SING N N 44
CTJ C21 O2A SING N N 45
CTJ C21 O2B DOUB N N 46
CTJ O2A HO2A SING N N 47
CTJ "C3'" "H3'" SING N N 48
CTJ "C3'" "H3'A" SING N N 49
CTJ "C4'" O4A SING N N 50
CTJ "C4'" O4B DOUB N N 51
CTJ O4A HO4A SING N N 52
CTJ "C3'" N6 SING N N 53
CTJ N6 C26 DOUB Y N 54
CTJ N6 C22 SING Y N 55
CTJ C26 C25 SING Y N 56
CTJ C25 C24 DOUB Y N 57
CTJ C24 C23 SING Y N 58
CTJ C23 C22 DOUB Y N 59
CTJ C26 H26 SING N N 60
CTJ C25 H25 SING N N 61
CTJ C24 H24 SING N N 62
CTJ C23 H23 SING N N 63
CTJ C22 H22 SING N N 64
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CTJ SMILES ACDLabs 12.01 "O=C(O)C(O\N=C(\c1nc(sc1)N)C(=O)NC(C=O)C2SCC(=C(N2)C(=O)O)C[n+]3ccccc3)(C)C"
CTJ SMILES_CANONICAL CACTVS 3.370 "CC(C)(O\N=C(/C(=O)N[C@H](C=O)[C@@H]1NC(=C(CS1)C[n+]2ccccc2)C(O)=O)c3csc(N)n3)C(O)=O"
CTJ SMILES CACTVS 3.370 "CC(C)(ON=C(C(=O)N[CH](C=O)[CH]1NC(=C(CS1)C[n+]2ccccc2)C(O)=O)c3csc(N)n3)C(O)=O"
CTJ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CC(C)(C(=O)O)O/N=C(/c1csc(n1)N)\C(=O)N[C@H](C=O)[C@@H]2NC(=C(CS2)C[n+]3ccccc3)C(=O)O"
CTJ SMILES "OpenEye OEToolkits" 1.7.0 "CC(C)(C(=O)O)ON=C(c1csc(n1)N)C(=O)NC(C=O)C2NC(=C(CS2)C[n+]3ccccc3)C(=O)O"
CTJ InChI InChI 1.03 "InChI=1S/C22H24N6O7S2/c1-22(2,20(33)34)35-27-16(14-11-37-21(23)25-14)17(30)24-13(9-29)18-26-15(19(31)32)12(10-36-18)8-28-6-4-3-5-7-28/h3-7,9,11,13,18,26H,8,10H2,1-2H3,(H4-,23,24,25,30,31,32,33,34)/p+1/b27-16-/t13-,18-/m1/s1"
CTJ InChIKey InChI 1.03 BJJNSFSVDFPVPL-QNLDICNMSA-O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
CTJ "SYSTEMATIC NAME" ACDLabs 12.01 "1-({(2R)-2-[(1R)-1-{[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-{[(2-carboxypropan-2-yl)oxy]imino}acetyl]amino}-2-oxoethyl]-4-carboxy-3,6-dihydro-2H-1,3-thiazin-5-yl}methyl)pyridinium"
CTJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2R)-2-[(1R)-1-[[(2Z)-2-(2-azanyl-1,3-thiazol-4-yl)-2-(1-hydroxy-2-methyl-1-oxo-propan-2-yl)oxyimino-ethanoyl]amino]-2-oxo-ethyl]-5-(pyridin-1-ium-1-ylmethyl)-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CTJ "Create component" 2010-10-12 PDBJ
CTJ "Modify aromatic_flag" 2011-06-04 RCSB
CTJ "Modify descriptor" 2011-06-04 RCSB
CTJ "Modify PCM" 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id CTJ
_pdbx_chem_comp_pcm.modified_residue_id SER
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category "Covalent chemical modification"
_pdbx_chem_comp_pcm.position "Amino-acid side chain"
_pdbx_chem_comp_pcm.polypeptide_position "Any position"
_pdbx_chem_comp_pcm.comp_id_linking_atom C
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
#