data_CWD # _chem_comp.id CWD _chem_comp.name "3-(5-chloro-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-L-alanine" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C7 H8 Cl N3 O4" _chem_comp.mon_nstd_parent_comp_id ALA _chem_comp.pdbx_synonyms chlorowillardiine _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-05-04 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 233.609 _chem_comp.one_letter_code ? _chem_comp.three_letter_code CWD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3RT8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal CWD N1 N1 N 0 1 N N N -19.949 -1.105 -19.307 -0.021 -0.136 -0.507 N1 CWD 1 CWD C2 C2 C 0 1 N N N -18.710 -0.652 -19.512 0.340 -1.425 -0.371 C2 CWD 2 CWD O2 O2 O 0 1 N N N -17.815 -1.422 -19.654 -0.493 -2.299 -0.516 O2 CWD 3 CWD N3 N3 N 0 1 N N N -18.456 0.702 -19.521 1.609 -1.761 -0.077 N3 CWD 4 CWD C4 C4 C 0 1 N N N -19.478 1.592 -19.326 2.545 -0.805 0.086 C4 CWD 5 CWD O4 O4 O 0 1 N N N -19.200 2.951 -19.370 3.694 -1.108 0.352 O4 CWD 6 CWD C5 C5 C 0 1 N N N -20.774 1.133 -19.114 2.180 0.557 -0.054 C5 CWD 7 CWD CL5 CL5 CL 0 0 N N N -22.179 2.236 -18.890 3.363 1.811 0.150 CL5 CWD 8 CWD C6 C6 C 0 1 N N N -21.001 -0.194 -19.107 0.899 0.866 -0.349 C6 CWD 9 CWD C7 C7 C 0 1 N N N -20.187 -2.531 -19.361 -1.410 0.199 -0.834 C7 CWD 10 CWD C8 C8 C 0 1 N N S -20.194 -3.121 -20.774 -2.209 0.375 0.459 C8 CWD 11 CWD N8 N8 N 0 1 N N N -21.332 -2.712 -21.577 -2.076 -0.832 1.286 N8 CWD 12 CWD C9 C9 C 0 1 N N N -19.783 -4.592 -20.881 -3.661 0.598 0.125 C9 CWD 13 CWD O91 O91 O 0 1 N N N -20.538 -5.375 -21.356 -4.447 -0.317 0.205 O91 CWD 14 CWD O92 O92 O 0 1 N N N -18.685 -5.016 -20.122 -4.083 1.812 -0.262 O92 CWD 15 CWD HN3 HN3 H 0 1 N N N -17.525 1.035 -19.670 1.852 -2.695 0.018 HN3 CWD 16 CWD H6 H6 H 0 1 N N N -22.003 -0.563 -18.946 0.601 1.898 -0.460 H6 CWD 17 CWD H7 H7 H 0 1 N N N -19.387 -3.028 -18.793 -1.435 1.126 -1.406 H7 CWD 18 CWD H7A H7A H 0 1 N N N -21.171 -2.725 -18.910 -1.848 -0.605 -1.425 H7A CWD 19 CWD H8 H8 H 0 1 N N N -19.344 -2.632 -21.273 -1.827 1.235 1.008 H8 CWD 20 CWD HN8 HN8 H 0 1 N N N -21.271 -3.133 -22.482 -2.424 -1.644 0.798 HN8 CWD 21 CWD HN8A HN8A H 0 0 N N N -22.177 -3.004 -21.130 -1.120 -0.967 1.577 HN8A CWD 22 CWD H81 H81 H 0 1 N N N -18.679 -5.965 -20.076 -5.023 1.906 -0.466 H81 CWD 23 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal CWD N1 C2 SING N N 1 CWD N1 C6 SING N N 2 CWD N1 C7 SING N N 3 CWD C2 O2 DOUB N N 4 CWD C2 N3 SING N N 5 CWD N3 C4 SING N N 6 CWD N3 HN3 SING N N 7 CWD C4 O4 DOUB N N 8 CWD C4 C5 SING N N 9 CWD C5 CL5 SING N N 10 CWD C5 C6 DOUB N N 11 CWD C6 H6 SING N N 12 CWD C7 C8 SING N N 13 CWD C7 H7 SING N N 14 CWD C7 H7A SING N N 15 CWD C8 N8 SING N N 16 CWD C8 C9 SING N N 17 CWD C8 H8 SING N N 18 CWD N8 HN8 SING N N 19 CWD N8 HN8A SING N N 20 CWD C9 O91 DOUB N N 21 CWD C9 O92 SING N N 22 CWD O92 H81 SING N N 23 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor CWD SMILES ACDLabs 12.01 "O=C(O)C(N)CN1C=C(Cl)C(=O)NC1=O" CWD SMILES_CANONICAL CACTVS 3.370 "N[C@@H](CN1C=C(Cl)C(=O)NC1=O)C(O)=O" CWD SMILES CACTVS 3.370 "N[CH](CN1C=C(Cl)C(=O)NC1=O)C(O)=O" CWD SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "C1=C(C(=O)NC(=O)N1C[C@@H](C(=O)O)N)Cl" CWD SMILES "OpenEye OEToolkits" 1.7.2 "C1=C(C(=O)NC(=O)N1CC(C(=O)O)N)Cl" CWD InChI InChI 1.03 "InChI=1S/C7H8ClN3O4/c8-3-1-11(2-4(9)6(13)14)7(15)10-5(3)12/h1,4H,2,9H2,(H,13,14)(H,10,12,15)/t4-/m0/s1" CWD InChIKey InChI 1.03 HEHLSRRDKJVHOM-BYPYZUCNSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier CWD "SYSTEMATIC NAME" ACDLabs 12.01 "3-(5-chloro-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-L-alanine" CWD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "(2S)-2-azanyl-3-[5-chloranyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]propanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site CWD "Create component" 2011-05-04 RCSB CWD "Modify descriptor" 2011-06-04 RCSB CWD "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id CWD _pdbx_chem_comp_synonyms.name chlorowillardiine _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##