data_CX8
#
_chem_comp.id CX8
_chem_comp.name "[2-{3-[(2-{[2-(amino-kappaN)ethyl]amino-kappaN}ethyl)amino-kappaN]propyl}-1H-benzo[de]isoquinoline-1,3(2H)-dionato(3-)]platinum"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C19 H21 N4 O2 Pt"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2014-12-05
_chem_comp.pdbx_modified_date 2015-08-28
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 532.474
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code CX8
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4WU9
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CX8 O2 O1 O 0 1 N N N -0.326 6.780 -97.494 -2.844 -1.896 1.124 O2 CX8 1
CX8 C12 C1 C 0 1 N N N -0.898 7.724 -96.897 -3.543 -0.961 0.785 C12 CX8 2
CX8 C11 C2 C 0 1 Y N N -0.516 9.134 -97.204 -4.931 -1.201 0.363 C11 CX8 3
CX8 C10 C3 C 0 1 Y N N -1.140 10.197 -96.544 -5.722 -0.097 -0.027 C10 CX8 4
CX8 C9 C4 C 0 1 Y N N -2.131 9.948 -95.585 -5.164 1.202 -0.002 C9 CX8 5
CX8 C19 C5 C 0 1 Y N N -2.750 11.020 -94.933 -5.949 2.279 -0.387 C19 CX8 6
CX8 C18 C6 C 0 1 Y N N -2.380 12.332 -95.240 -7.263 2.076 -0.791 C18 CX8 7
CX8 C17 C7 C 0 1 Y N N -1.392 12.585 -96.196 -7.819 0.830 -0.821 C17 CX8 8
CX8 C16 C8 C 0 1 Y N N -0.771 11.518 -96.844 -7.057 -0.289 -0.439 C16 CX8 9
CX8 C15 C9 C 0 1 Y N N 0.214 11.771 -97.794 -7.583 -1.593 -0.454 C15 CX8 10
CX8 C13 C10 C 0 1 Y N N 0.471 9.397 -98.153 -5.487 -2.471 0.335 C13 CX8 11
CX8 C14 C11 C 0 1 Y N N 0.840 10.710 -98.443 -6.804 -2.648 -0.074 C14 CX8 12
CX8 N4 N1 N 0 1 N N N -1.901 7.465 -95.930 -3.044 0.290 0.803 N4 CX8 13
CX8 C8 C12 C 0 1 N N N -2.527 8.544 -95.261 -3.769 1.362 0.432 C8 CX8 14
CX8 O1 O2 O 0 1 N N N -3.417 8.334 -94.405 -3.268 2.470 0.461 O1 CX8 15
CX8 C7 C13 C 0 1 N N N -2.286 6.081 -95.628 -1.658 0.490 1.235 C7 CX8 16
CX8 C6 C14 C 0 1 N N N -3.049 5.534 -96.833 -0.728 0.400 0.024 C6 CX8 17
CX8 C5 C15 C 0 1 N N N -4.533 5.273 -96.574 0.719 0.610 0.475 C5 CX8 18
CX8 N1 N2 N 0 1 N N N -5.174 6.484 -96.061 1.612 0.523 -0.687 N1 CX8 19
CX8 C1 C16 C 0 1 N N N -6.502 6.373 -95.424 1.592 -0.910 -1.303 C1 CX8 20
CX8 C2 C17 C 0 1 N N N -7.460 7.416 -96.054 2.598 -1.967 -0.762 C2 CX8 21
CX8 N2 N3 N 0 1 N N N -6.660 8.592 -96.383 4.060 -1.688 -0.848 N2 CX8 22
CX8 C3 C18 C 0 1 N N N -7.251 9.772 -97.000 5.043 -1.712 0.273 C3 CX8 23
CX8 C4 C19 C 0 1 N N N -6.087 10.792 -97.152 5.926 -0.458 0.533 C4 CX8 24
CX8 N3 N4 N 0 1 N N N -4.787 10.167 -97.605 5.222 0.901 0.842 N3 CX8 25
CX8 PT1 PT1 PT 0 0 N N N -4.759 8.323 -96.625 3.537 0.315 -0.108 PT1 CX8 26
CX8 H1 H1 H 0 1 N N N -3.514 10.833 -94.192 -5.537 3.277 -0.373 H1 CX8 27
CX8 H2 H2 H 0 1 N N N -2.861 13.157 -94.735 -7.860 2.926 -1.087 H2 CX8 28
CX8 H3 H3 H 0 1 N N N -1.111 13.601 -96.431 -8.843 0.702 -1.138 H3 CX8 29
CX8 H4 H4 H 0 1 N N N 0.492 12.788 -98.027 -8.603 -1.760 -0.765 H4 CX8 30
CX8 H5 H5 H 0 1 N N N 0.953 8.578 -98.667 -4.895 -3.325 0.630 H5 CX8 31
CX8 H6 H6 H 0 1 N N N 1.613 10.904 -99.172 -7.221 -3.644 -0.089 H6 CX8 32
CX8 H7 H7 H 0 1 N N N -2.929 6.058 -94.736 -1.560 1.473 1.696 H7 CX8 33
CX8 H8 H8 H 0 1 N N N -1.387 5.474 -95.447 -1.389 -0.279 1.958 H8 CX8 34
CX8 H9 H9 H 0 1 N N N -2.580 4.586 -97.136 -0.826 -0.582 -0.438 H9 CX8 35
CX8 H10 H10 H 0 1 N N N -2.966 6.263 -97.653 -0.998 1.170 -0.699 H10 CX8 36
CX8 H11 H11 H 0 1 N N N -5.019 4.974 -97.514 0.817 1.592 0.937 H11 CX8 37
CX8 H12 H12 H 0 1 N N N -4.637 4.465 -95.835 0.989 -0.160 1.199 H12 CX8 38
CX8 H13 H13 H 0 1 N N N -6.903 5.361 -95.584 0.588 -1.312 -1.170 H13 CX8 39
CX8 H14 H14 H 0 1 N N N -6.409 6.564 -94.345 1.763 -0.811 -2.375 H14 CX8 40
CX8 H15 H15 H 0 1 N N N -8.249 7.685 -95.336 2.359 -2.142 0.286 H15 CX8 41
CX8 H16 H16 H 0 1 N N N -7.918 7.005 -96.965 2.412 -2.900 -1.295 H16 CX8 42
CX8 H17 H17 H 0 1 N N N -8.042 10.186 -96.358 4.490 -1.919 1.189 H17 CX8 43
CX8 H18 H18 H 0 1 N N N -7.672 9.520 -97.985 5.713 -2.555 0.104 H18 CX8 44
CX8 H19 H19 H 0 1 N N N -5.919 11.275 -96.178 6.585 -0.686 1.371 H19 CX8 45
CX8 H20 H20 H 0 1 N N N -6.384 11.550 -97.891 6.556 -0.310 -0.344 H20 CX8 46
CX8 H21 H21 H 0 1 N N N -4.777 10.044 -98.597 5.061 1.007 1.832 H21 CX8 47
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CX8 C14 C13 DOUB Y N 1
CX8 C14 C15 SING Y N 2
CX8 C13 C11 SING Y N 3
CX8 C15 C16 DOUB Y N 4
CX8 N3 C4 SING N N 5
CX8 N3 PT1 SING N N 6
CX8 O2 C12 DOUB N N 7
CX8 C11 C12 SING N N 8
CX8 C11 C10 DOUB Y N 9
CX8 C4 C3 SING N N 10
CX8 C3 N2 SING N N 11
CX8 C12 N4 SING N N 12
CX8 C16 C10 SING Y N 13
CX8 C16 C17 SING Y N 14
CX8 C6 C5 SING N N 15
CX8 C6 C7 SING N N 16
CX8 PT1 N2 SING N N 17
CX8 PT1 N1 SING N N 18
CX8 C5 N1 SING N N 19
CX8 C10 C9 SING Y N 20
CX8 N2 C2 SING N N 21
CX8 C17 C18 DOUB Y N 22
CX8 N1 C1 SING N N 23
CX8 C2 C1 SING N N 24
CX8 N4 C7 SING N N 25
CX8 N4 C8 SING N N 26
CX8 C9 C8 SING N N 27
CX8 C9 C19 DOUB Y N 28
CX8 C8 O1 DOUB N N 29
CX8 C18 C19 SING Y N 30
CX8 C19 H1 SING N N 31
CX8 C18 H2 SING N N 32
CX8 C17 H3 SING N N 33
CX8 C15 H4 SING N N 34
CX8 C13 H5 SING N N 35
CX8 C14 H6 SING N N 36
CX8 C7 H7 SING N N 37
CX8 C7 H8 SING N N 38
CX8 C6 H9 SING N N 39
CX8 C6 H10 SING N N 40
CX8 C5 H11 SING N N 41
CX8 C5 H12 SING N N 42
CX8 C1 H13 SING N N 43
CX8 C1 H14 SING N N 44
CX8 C2 H15 SING N N 45
CX8 C2 H16 SING N N 46
CX8 C3 H17 SING N N 47
CX8 C3 H18 SING N N 48
CX8 C4 H19 SING N N 49
CX8 C4 H20 SING N N 50
CX8 N3 H21 SING N N 51
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CX8 SMILES ACDLabs 12.01 "O=C3c1c2c(ccc1)cccc2C(=O)N3CCCN5[Pt]4NCCN4CC5"
CX8 InChI InChI 1.03 "InChI=1S/C19H21N4O2.Pt/c20-8-10-22-12-11-21-9-3-13-23-18(24)15-6-1-4-14-5-2-7-16(17(14)15)19(23)25;/h1-2,4-7,20H,3,8-13H2;/q-3;+3"
CX8 InChIKey InChI 1.03 XUMMUUAWYGZUAF-UHFFFAOYSA-N
CX8 SMILES_CANONICAL CACTVS 3.385 "O=C1N(CCCN2CCN3CCN[Pt]23)C(=O)c4cccc5cccc1c45"
CX8 SMILES CACTVS 3.385 "O=C1N(CCCN2CCN3CCN[Pt]23)C(=O)c4cccc5cccc1c45"
CX8 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1cc2cccc3c2c(c1)C(=O)N(C3=O)CCCN4CCN5[Pt]4NCC5"
CX8 SMILES "OpenEye OEToolkits" 1.9.2 "c1cc2cccc3c2c(c1)C(=O)N(C3=O)CCCN4CCN5[Pt]4NCC5"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
CX8 "SYSTEMATIC NAME" ACDLabs 12.01 "[2-{3-[(2-{[2-(amino-kappaN)ethyl]amino-kappaN}ethyl)amino-kappaN]propyl}-1H-benzo[de]isoquinoline-1,3(2H)-dionato(3-)]platinum"
CX8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "2-[3-(1,4,6-triaza-5$l^{3}-platinabicyclo[3.3.0]octan-4-yl)propyl]benzo[de]isoquinoline-1,3-dione"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CX8 "Create component" 2014-12-05 PDBJ
CX8 "Initial release" 2015-09-02 RCSB
#