data_CXV # _chem_comp.id CXV _chem_comp.name ;(2R,4S)-2-[(1S)-1-({[3-(2-chlorophenyl)-5-methyl-1,2-oxazol-4-yl]carbonyl}amino)-2-oxoethyl]-5,5-dimethyl-1,3-thiazolid ine-4-carboxylic acid ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAD _chem_comp.formula "C19 H20 Cl N3 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "CLOXACILLIN open form (1R form)" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-08-17 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 437.897 _chem_comp.one_letter_code ? _chem_comp.three_letter_code CXV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3MZD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal CXV CL CL CL 0 0 N N N N N N 40.750 9.459 27.513 -3.018 -2.377 1.845 CL CXV 1 CXV C1 C1 C 0 1 N N N N N N 42.838 6.457 27.195 1.428 3.374 -0.984 C1 CXV 2 CXV O1 O1 O 0 1 N N N N N N 41.871 5.719 27.184 0.704 4.052 -0.295 O1 CXV 3 CXV C2 C2 C 0 1 N N S N N N 43.514 6.783 28.510 1.148 1.902 -1.149 C2 CXV 4 CXV N2 N2 N 0 1 N N N N N N 43.818 8.181 28.725 -0.042 1.541 -0.375 N2 CXV 5 CXV C3 C3 C 0 1 N N R N N N 44.934 6.227 28.467 2.347 1.096 -0.646 C3 CXV 6 CXV S4 S4 S 0 1 N N N N N N 45.831 6.559 29.966 2.560 1.287 1.173 S4 CXV 7 CXV C5 C5 C 0 1 N N N N N N 46.179 4.869 30.365 3.368 -0.346 1.408 C5 CXV 8 CXV C6 C6 C 0 1 N N S N N N 45.092 4.095 29.600 2.993 -1.120 0.130 C6 CXV 9 CXV N7 N7 N 0 1 N N N N N N 44.860 4.793 28.348 2.091 -0.368 -0.747 N7 CXV 10 CXV C8 C8 C 0 1 N N N N N N 45.346 2.634 29.389 4.253 -1.439 -0.633 C8 CXV 11 CXV C21 C21 C 0 1 N N N N N N 43.289 9.027 29.605 -1.268 1.703 -0.911 C21 CXV 12 CXV O21 O21 O 0 1 N N N N N N 43.740 10.139 29.591 -1.387 2.148 -2.037 O21 CXV 13 CXV C22 C22 C 0 1 Y N N N N N 42.149 8.759 30.538 -2.465 1.340 -0.133 C22 CXV 14 CXV C23 C23 C 0 1 Y N N N N N 41.969 7.658 31.519 -3.264 2.149 0.635 C23 CXV 15 CXV O24 O24 O 0 1 Y N N N N N 40.763 7.899 32.094 -4.222 1.368 1.141 O24 CXV 16 CXV N25 N25 N 0 1 Y N N N N N 40.109 9.092 31.593 -4.128 0.214 0.801 N25 CXV 17 CXV C26 C26 C 0 1 Y N N N N N 40.921 9.627 30.642 -3.106 0.015 0.008 C26 CXV 18 CXV C27 C27 C 0 1 N N N N N N 42.724 6.417 32.011 -3.095 3.629 0.862 C27 CXV 19 CXV C28 C28 C 0 1 Y N N N N N 40.729 10.809 29.896 -2.680 -1.263 -0.611 C28 CXV 20 CXV C29 C29 C 0 1 Y N N N N N 40.704 10.880 28.494 -2.609 -2.424 0.158 C29 CXV 21 CXV C30 C30 C 0 1 Y N N N N N 40.647 12.131 27.855 -2.211 -3.612 -0.425 C30 CXV 22 CXV C31 C31 C 0 1 Y N N N N N 40.601 13.320 28.592 -1.885 -3.650 -1.768 C31 CXV 23 CXV C32 C32 C 0 1 Y N N N N N 40.530 13.246 29.982 -1.954 -2.501 -2.536 C32 CXV 24 CXV C33 C33 C 0 1 Y N N N N N 40.581 12.001 30.616 -2.355 -1.310 -1.966 C33 CXV 25 CXV C51 C51 C 0 1 N N N N N N 46.040 4.672 31.875 2.810 -1.049 2.647 C51 CXV 26 CXV C52 C52 C 0 1 N N N N N N 47.603 4.532 29.917 4.885 -0.185 1.519 C52 CXV 27 CXV O81 O81 O 0 1 N N N N N N 45.344 1.896 30.392 5.019 -2.476 -0.259 O81 CXV 28 CXV O82 O82 O 0 1 N N N N N N 45.513 2.211 28.220 4.574 -0.761 -1.580 O82 CXV 29 CXV H1 H1 H 0 1 N N N N N N 43.212 6.877 26.273 2.273 3.823 -1.485 H1 CXV 30 CXV H2 H2 H 0 1 N N N N N N 42.814 6.393 29.264 0.978 1.681 -2.203 H2 CXV 31 CXV HN2 HN2 H 0 1 N N N N N N 44.524 8.565 28.129 0.052 1.186 0.522 HN2 CXV 32 CXV H3 H3 H 0 1 N N N N N N 45.447 6.704 27.619 3.257 1.374 -1.179 H3 CXV 33 CXV H6 H6 H 0 1 N N N N N N 44.193 4.084 30.234 2.509 -2.054 0.414 H6 CXV 34 CXV HN7 HN7 H 0 1 N N N N N N 43.945 4.554 28.023 1.126 -0.581 -0.542 HN7 CXV 35 CXV H27 H27 H 0 1 N N N N N N 42.130 5.908 32.785 -3.645 4.179 0.098 H27 CXV 36 CXV H27A H27A H 0 0 N N N N N N 42.891 5.731 31.167 -3.480 3.891 1.847 H27A CXV 37 CXV H27B H27B H 0 0 N N N N N N 43.693 6.721 32.434 -2.037 3.886 0.805 H27B CXV 38 CXV H30 H30 H 0 1 N N N N N N 40.639 12.175 26.776 -2.155 -4.512 0.169 H30 CXV 39 CXV H31 H31 H 0 1 N N N N N N 40.620 14.277 28.093 -1.575 -4.581 -2.220 H31 CXV 40 CXV H32 H32 H 0 1 N N N N N N 40.436 14.148 30.568 -1.697 -2.537 -3.584 H32 CXV 41 CXV H33 H33 H 0 1 N N N N N N 40.504 11.957 31.692 -2.413 -0.415 -2.568 H33 CXV 42 CXV H51 H51 H 0 1 N N N N N N 46.255 3.624 32.130 1.734 -1.177 2.539 H51 CXV 43 CXV H51A H51A H 0 0 N N N N N N 46.751 5.329 32.397 3.283 -2.026 2.754 H51A CXV 44 CXV H51B H51B H 0 0 N N N N N N 45.014 4.921 32.184 3.017 -0.446 3.531 H51B CXV 45 CXV H52 H52 H 0 1 N N N N N N 47.826 3.483 30.162 5.123 0.431 2.386 H52 CXV 46 CXV H52A H52A H 0 0 N N N N N N 47.691 4.682 28.831 5.347 -1.166 1.632 H52A CXV 47 CXV H52B H52B H 0 0 N N N N N N 48.316 5.189 30.436 5.267 0.295 0.617 H52B CXV 48 CXV HO81 HO81 H 0 0 N N N N N N 45.485 0.996 30.124 5.818 -2.641 -0.779 HO81 CXV 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal CXV CL C29 SING N N 1 CXV O1 C1 DOUB N N 2 CXV C1 C2 SING N N 3 CXV C1 H1 SING N N 4 CXV C3 C2 SING N N 5 CXV C2 N2 SING N N 6 CXV C2 H2 SING N N 7 CXV N2 C21 SING N N 8 CXV N2 HN2 SING N N 9 CXV N7 C3 SING N N 10 CXV C3 S4 SING N N 11 CXV C3 H3 SING N N 12 CXV S4 C5 SING N N 13 CXV C6 C5 SING N N 14 CXV C52 C5 SING N N 15 CXV C5 C51 SING N N 16 CXV N7 C6 SING N N 17 CXV C8 C6 SING N N 18 CXV C6 H6 SING N N 19 CXV N7 HN7 SING N N 20 CXV O82 C8 DOUB N N 21 CXV C8 O81 SING N N 22 CXV O21 C21 DOUB N N 23 CXV C21 C22 SING N N 24 CXV C22 C26 SING Y N 25 CXV C22 C23 DOUB Y N 26 CXV C23 C27 SING N N 27 CXV C23 O24 SING Y N 28 CXV N25 O24 SING Y N 29 CXV C26 N25 DOUB Y N 30 CXV C28 C26 SING N N 31 CXV C27 H27 SING N N 32 CXV C27 H27A SING N N 33 CXV C27 H27B SING N N 34 CXV C29 C28 DOUB Y N 35 CXV C28 C33 SING Y N 36 CXV C30 C29 SING Y N 37 CXV C30 C31 DOUB Y N 38 CXV C30 H30 SING N N 39 CXV C31 C32 SING Y N 40 CXV C31 H31 SING N N 41 CXV C32 C33 DOUB Y N 42 CXV C32 H32 SING N N 43 CXV C33 H33 SING N N 44 CXV C51 H51 SING N N 45 CXV C51 H51A SING N N 46 CXV C51 H51B SING N N 47 CXV C52 H52 SING N N 48 CXV C52 H52A SING N N 49 CXV C52 H52B SING N N 50 CXV O81 HO81 SING N N 51 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor CXV SMILES ACDLabs 12.01 "O=C(NC(C=O)C1SC(C(N1)C(=O)O)(C)C)c3c(onc3c2ccccc2Cl)C" CXV InChI InChI 1.03 "InChI=1S/C19H20ClN3O5S/c1-9-13(14(23-28-9)10-6-4-5-7-11(10)20)16(25)21-12(8-24)17-22-15(18(26)27)19(2,3)29-17/h4-8,12,15,17,22H,1-3H3,(H,21,25)(H,26,27)/t12-,15-,17+/m0/s1" CXV InChIKey InChI 1.03 DMRXQBXKFQMOBD-YLQAJVPDSA-N CXV SMILES_CANONICAL CACTVS 3.370 "Cc1onc(c2ccccc2Cl)c1C(=O)N[C@@H](C=O)[C@@H]3N[C@@H](C(O)=O)C(C)(C)S3" CXV SMILES CACTVS 3.370 "Cc1onc(c2ccccc2Cl)c1C(=O)N[CH](C=O)[CH]3N[CH](C(O)=O)C(C)(C)S3" CXV SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "Cc1c(c(no1)c2ccccc2Cl)C(=O)N[C@@H](C=O)[C@@H]3N[C@H](C(S3)(C)C)C(=O)O" CXV SMILES "OpenEye OEToolkits" 1.7.2 "Cc1c(c(no1)c2ccccc2Cl)C(=O)NC(C=O)C3NC(C(S3)(C)C)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier CXV "SYSTEMATIC NAME" ACDLabs 12.01 "(2R,4S)-2-[(1S)-1-({[3-(2-chlorophenyl)-5-methyl-1,2-oxazol-4-yl]carbonyl}amino)-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid" CXV "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "(2R,4S)-2-[(1S)-1-[[3-(2-chlorophenyl)-5-methyl-1,2-oxazol-4-yl]carbonylamino]-2-oxidanylidene-ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site CXV "Create component" 2011-08-17 RCSB CXV "Modify synonyms" 2020-06-05 PDBE CXV "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id CXV _pdbx_chem_comp_synonyms.name "CLOXACILLIN open form (1R form)" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id CXV _pdbx_chem_comp_pcm.modified_residue_id SER _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C1 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #