data_D0R # _chem_comp.id D0R _chem_comp.name "N-[(2S,4S,5S)-5-amino-4-hydroxy-1,6-diphenylhexan-2-yl]-N~2~-(methyl{[2-(propan-2-yl)-1,3-thiazol-4-yl]methyl}carbamoyl)-L-valinamide" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H45 N5 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "desthiazolylmethyloxycarbonyl ritonavir" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-08-26 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 579.796 _chem_comp.one_letter_code ? _chem_comp.three_letter_code D0R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3TJS _chem_comp.pdbx_subcomponent_list "019 VAL 015" _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal D0R C21 C21 C 0 1 N N N 14.440 -18.585 -8.131 2.681 1.871 -0.571 C21 019 1 D0R N74 N74 N 0 1 N N N 13.228 -18.388 -8.673 3.682 2.033 -1.459 N74 019 2 D0R C75 C75 C 0 1 N N N 12.633 -17.077 -8.959 4.948 2.634 -1.034 C75 019 3 D0R O76 O76 O 0 1 N N N 14.816 -19.726 -7.968 2.828 2.228 0.582 O76 019 4 D0R C77 C77 C 0 1 Y N N 13.401 -16.369 -10.084 5.884 1.552 -0.560 C77 019 5 D0R C80 C80 C 0 1 Y N N 13.709 -14.997 -10.003 6.802 0.991 -1.352 C80 019 6 D0R S81 S81 S 0 1 Y N N 14.579 -14.566 -11.444 7.671 -0.215 -0.406 S81 019 7 D0R C82 C82 C 0 1 Y N N 14.533 -16.157 -12.135 6.713 0.154 0.961 C82 019 8 D0R N83 N83 N 0 1 Y N N 13.863 -16.974 -11.249 5.867 1.085 0.673 N83 019 9 D0R C85 C85 C 0 1 N N N 15.191 -16.349 -13.477 6.842 -0.506 2.309 C85 019 10 D0R C86 C86 C 0 1 N N N 15.222 -15.099 -14.359 6.593 -2.009 2.166 C86 019 11 D0R C90 C90 C 0 1 N N N 14.513 -17.489 -14.235 8.250 -0.272 2.859 C90 019 12 D0R C95 C95 C 0 1 N N N 12.540 -19.414 -8.980 3.503 1.609 -2.850 C95 019 13 D0R N20 N20 N 0 1 N N N 15.186 -17.537 -7.755 1.516 1.318 -0.962 N VAL 14 D0R C19 C19 C 0 1 N N S 16.564 -17.500 -7.195 0.426 1.147 0.002 CA VAL 15 D0R C18 C18 C 0 1 N N N 17.111 -18.553 -6.238 -0.469 0.021 -0.447 C VAL 16 D0R O61 O61 O 0 1 N N N 17.558 -18.376 -5.101 -0.396 -0.396 -1.583 O VAL 17 D0R C62 C62 C 0 1 N N N 16.887 -16.086 -6.819 -0.386 2.441 0.088 CB VAL 18 D0R C64 C64 C 0 1 N N N 17.658 -15.511 -8.000 -1.423 2.319 1.206 CG1 VAL 19 D0R C68 C68 C 0 1 N N N 15.610 -15.323 -6.503 0.552 3.612 0.388 CG2 VAL 20 D0R N11 N11 N 0 1 N N N 20.921 -23.098 -8.949 -5.851 -0.204 1.682 N11 015 21 D0R C12 C12 C 0 1 N N S 20.114 -21.974 -9.243 -5.758 -0.439 0.235 C12 015 22 D0R C13 C13 C 0 1 N N S 19.218 -22.220 -8.001 -4.287 -0.455 -0.185 C13 015 23 D0R C14 C14 C 0 1 N N N 17.840 -21.587 -7.962 -3.556 -1.573 0.562 C14 015 24 D0R C15 C15 C 0 1 N N S 17.511 -21.016 -6.567 -2.130 -1.699 0.021 C15 015 25 D0R C26 C26 C 0 1 N N N 18.980 -21.912 -10.254 -6.489 0.679 -0.511 C26 015 26 D0R C28 C28 C 0 1 Y N N 18.648 -20.594 -10.889 -7.960 0.617 -0.192 C28 015 27 D0R C31 C31 C 0 1 Y N N 19.492 -19.492 -10.671 -8.464 1.323 0.885 C31 015 28 D0R C32 C32 C 0 1 Y N N 19.226 -18.254 -11.218 -9.814 1.266 1.179 C32 015 29 D0R C33 C33 C 0 1 Y N N 18.062 -18.109 -12.006 -10.660 0.503 0.395 C33 015 30 D0R C34 C34 C 0 1 Y N N 17.217 -19.201 -12.249 -10.156 -0.202 -0.682 C34 015 31 D0R C35 C35 C 0 1 Y N N 17.506 -20.452 -11.664 -8.808 -0.140 -0.979 C35 015 32 D0R O41 O41 O 0 1 N N N 19.871 -21.906 -6.747 -3.687 0.802 0.133 O41 015 33 D0R C44 C44 C 0 1 N N N 16.579 -21.803 -5.639 -1.476 -2.958 0.596 C44 015 34 D0R C45 C45 C 0 1 Y N N 15.372 -21.342 -4.874 -0.119 -3.149 -0.030 C45 015 35 D0R C48 C48 C 0 1 Y N N 14.770 -22.240 -4.010 0.998 -2.582 0.554 C48 015 36 D0R C49 C49 C 0 1 Y N N 13.630 -21.903 -3.295 2.243 -2.758 -0.020 C49 015 37 D0R C50 C50 C 0 1 Y N N 13.082 -20.631 -3.400 2.371 -3.501 -1.179 C50 015 38 D0R C51 C51 C 0 1 Y N N 13.672 -19.687 -4.238 1.254 -4.068 -1.763 C51 015 39 D0R C52 C52 C 0 1 Y N N 14.801 -20.061 -4.965 0.010 -3.897 -1.186 C52 015 40 D0R N58 N58 N 0 1 N N N 17.081 -19.688 -6.905 -1.352 -0.522 0.414 N58 015 41 D0R H75 H75 H 0 1 N N N 11.587 -17.217 -9.270 5.400 3.162 -1.874 H751 019 42 D0R H75A H75A H 0 0 N N N 12.673 -16.458 -8.051 4.763 3.336 -0.221 H752 019 43 D0R H80 H80 H 0 1 N N N 13.451 -14.333 -9.192 6.980 1.235 -2.389 H80 019 44 D0R H85 H85 H 0 1 N N N 16.241 -16.591 -13.255 6.109 -0.081 2.994 H85 019 45 D0R H86 H86 H 0 1 N N N 15.718 -15.334 -15.312 7.326 -2.435 1.481 H861 019 46 D0R H86A H86A H 0 0 N N N 14.193 -14.763 -14.555 6.687 -2.487 3.141 H862 019 47 D0R H86B H86B H 0 0 N N N 15.777 -14.301 -13.844 5.590 -2.176 1.774 H863 019 48 D0R H90 H90 H 0 1 N N N 15.000 -17.621 -15.212 8.427 0.798 2.960 H901 019 49 D0R H90A H90A H 0 0 N N N 14.600 -18.419 -13.654 8.344 -0.751 3.834 H902 019 50 D0R H90B H90B H 0 0 N N N 13.450 -17.248 -14.385 8.983 -0.698 2.173 H903 019 51 D0R H95 H95 H 0 1 N N N 11.579 -19.096 -9.410 3.096 2.435 -3.433 H951 019 52 D0R H95A H95A H 0 0 N N N 13.090 -20.017 -9.718 4.465 1.310 -3.266 H952 019 53 D0R H95B H95B H 0 0 N N N 12.357 -20.016 -8.078 2.814 0.765 -2.887 H953 019 54 D0R HN20 HN20 H 0 0 N N N 14.750 -16.644 -7.868 1.399 1.033 -1.882 H VAL 55 D0R H19 H19 H 0 1 N N N 17.155 -17.883 -8.040 0.841 0.913 0.982 HA VAL 56 D0R H62 H62 H 0 1 N N N 17.498 -16.014 -5.907 -0.893 2.615 -0.861 HB VAL 57 D0R H64 H64 H 0 1 N N N 17.928 -14.466 -7.788 -0.922 2.064 2.140 HG11 VAL 58 D0R H64A H64A H 0 0 N N N 18.572 -16.100 -8.163 -1.947 3.267 1.321 HG12 VAL 59 D0R H64B H64B H 0 0 N N N 17.030 -15.551 -8.902 -2.139 1.536 0.953 HG13 VAL 60 D0R H68 H68 H 0 1 N N N 15.859 -14.287 -6.229 1.291 3.700 -0.409 HG21 VAL 61 D0R H68A H68A H 0 0 N N N 14.956 -15.320 -7.388 -0.027 4.534 0.449 HG22 VAL 62 D0R H68B H68B H 0 0 N N N 15.090 -15.809 -5.664 1.059 3.438 1.337 HG23 VAL 63 D0R HN11 HN11 H 0 0 N N N 21.588 -22.855 -8.244 -5.434 0.680 1.933 H11 015 64 D0R H12 H12 H 0 1 N N N 20.786 -21.159 -9.550 -6.216 -1.398 -0.007 H12 015 65 D0R H13 H13 H 0 1 N N N 19.054 -23.301 -8.125 -4.217 -0.630 -1.258 H13 015 66 D0R H14 H14 H 0 1 N N N 17.807 -20.768 -8.695 -3.521 -1.337 1.625 H141 015 67 D0R H14A H14A H 0 0 N N N 17.093 -22.353 -8.215 -4.085 -2.514 0.415 H142 015 68 D0R H15 H15 H 0 1 N N N 18.382 -21.068 -5.897 -2.159 -1.769 -1.066 H15 015 69 D0R H26 H26 H 0 1 N N N 19.255 -22.592 -11.073 -6.090 1.644 -0.201 H261 015 70 D0R H26A H26A H 0 0 N N N 18.073 -22.241 -9.726 -6.345 0.553 -1.584 H262 015 71 D0R H31 H31 H 0 1 N N N 20.373 -19.618 -10.059 -7.803 1.918 1.498 H31 015 72 D0R H32 H32 H 0 1 N N N 19.889 -17.419 -11.049 -10.207 1.817 2.020 H32 015 73 D0R H33 H33 H 0 1 N N N 17.820 -17.144 -12.427 -11.714 0.459 0.625 H33 015 74 D0R H34 H34 H 0 1 N N N 16.349 -19.085 -12.881 -10.817 -0.798 -1.293 H34 015 75 D0R H35 H35 H 0 1 N N N 16.844 -21.291 -11.818 -8.414 -0.691 -1.820 H35 015 76 D0R HO41 HO41 H 0 0 N N N 19.275 -22.076 -6.027 -3.714 1.024 1.074 HO4 015 77 D0R H44 H44 H 0 1 N N N 16.175 -22.588 -6.295 -1.367 -2.850 1.675 H441 015 78 D0R H44A H44A H 0 0 N N N 17.255 -22.161 -4.849 -2.102 -3.824 0.379 H442 015 79 D0R H48 H48 H 0 1 N N N 15.197 -23.225 -3.890 0.898 -2.002 1.460 H48 015 80 D0R H49 H49 H 0 1 N N N 13.165 -22.635 -2.652 3.116 -2.315 0.437 H49 015 81 D0R H50 H50 H 0 1 N N N 12.200 -20.374 -2.833 3.344 -3.638 -1.627 H50 015 82 D0R H51 H51 H 0 1 N N N 13.265 -18.690 -4.322 1.354 -4.648 -2.669 H51 015 83 D0R H52 H52 H 0 1 N N N 15.255 -19.337 -5.625 -0.862 -4.344 -1.640 H52 015 84 D0R HN58 HN58 H 0 0 N N N 16.684 -19.611 -7.819 -1.472 -0.133 1.295 H58 015 85 D0R HN1A HN1A H 0 0 N N N 20.344 -23.845 -8.618 -6.809 -0.253 1.995 H2 015 86 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal D0R C12 N11 SING N N 1 D0R N11 HN11 SING N N 2 D0R N11 HN1A SING N N 3 D0R C26 C12 SING N N 4 D0R C12 C13 SING N N 5 D0R C12 H12 SING N N 6 D0R C13 C14 SING N N 7 D0R C13 O41 SING N N 8 D0R C13 H13 SING N N 9 D0R C14 C15 SING N N 10 D0R C14 H14 SING N N 11 D0R C14 H14A SING N N 12 D0R N58 C15 SING N N 13 D0R C15 C44 SING N N 14 D0R C15 H15 SING N N 15 D0R C19 C18 SING N N 16 D0R N58 C18 SING N N 17 D0R C18 O61 DOUB N N 18 D0R N20 C19 SING N N 19 D0R C19 C62 SING N N 20 D0R C19 H19 SING N N 21 D0R C21 N20 SING N N 22 D0R N20 HN20 SING N N 23 D0R N74 C21 SING N N 24 D0R C21 O76 DOUB N N 25 D0R C28 C26 SING N N 26 D0R C26 H26 SING N N 27 D0R C26 H26A SING N N 28 D0R C35 C28 DOUB Y N 29 D0R C28 C31 SING Y N 30 D0R C32 C31 DOUB Y N 31 D0R C31 H31 SING N N 32 D0R C33 C32 SING Y N 33 D0R C32 H32 SING N N 34 D0R C34 C33 DOUB Y N 35 D0R C33 H33 SING N N 36 D0R C34 C35 SING Y N 37 D0R C34 H34 SING N N 38 D0R C35 H35 SING N N 39 D0R O41 HO41 SING N N 40 D0R C44 C45 SING N N 41 D0R C44 H44 SING N N 42 D0R C44 H44A SING N N 43 D0R C52 C45 DOUB Y N 44 D0R C45 C48 SING Y N 45 D0R C48 C49 DOUB Y N 46 D0R C48 H48 SING N N 47 D0R C50 C49 SING Y N 48 D0R C49 H49 SING N N 49 D0R C51 C50 DOUB Y N 50 D0R C50 H50 SING N N 51 D0R C52 C51 SING Y N 52 D0R C51 H51 SING N N 53 D0R C52 H52 SING N N 54 D0R N58 HN58 SING N N 55 D0R C64 C62 SING N N 56 D0R C62 C68 SING N N 57 D0R C62 H62 SING N N 58 D0R C64 H64 SING N N 59 D0R C64 H64A SING N N 60 D0R C64 H64B SING N N 61 D0R C68 H68 SING N N 62 D0R C68 H68A SING N N 63 D0R C68 H68B SING N N 64 D0R C95 N74 SING N N 65 D0R C75 N74 SING N N 66 D0R C77 C75 SING N N 67 D0R C75 H75 SING N N 68 D0R C75 H75A SING N N 69 D0R N83 C77 SING Y N 70 D0R C77 C80 DOUB Y N 71 D0R S81 C80 SING Y N 72 D0R C80 H80 SING N N 73 D0R C82 S81 SING Y N 74 D0R C85 C82 SING N N 75 D0R C82 N83 DOUB Y N 76 D0R C86 C85 SING N N 77 D0R C90 C85 SING N N 78 D0R C85 H85 SING N N 79 D0R C86 H86 SING N N 80 D0R C86 H86A SING N N 81 D0R C86 H86B SING N N 82 D0R C90 H90 SING N N 83 D0R C90 H90A SING N N 84 D0R C90 H90B SING N N 85 D0R C95 H95 SING N N 86 D0R C95 H95A SING N N 87 D0R C95 H95B SING N N 88 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor D0R SMILES ACDLabs 12.01 "O=C(NC(Cc1ccccc1)CC(O)C(N)Cc2ccccc2)C(NC(=O)N(Cc3nc(sc3)C(C)C)C)C(C)C" D0R InChI InChI 1.03 "InChI=1S/C32H45N5O3S/c1-21(2)29(36-32(40)37(5)19-26-20-41-31(35-26)22(3)4)30(39)34-25(16-23-12-8-6-9-13-23)18-28(38)27(33)17-24-14-10-7-11-15-24/h6-15,20-22,25,27-29,38H,16-19,33H2,1-5H3,(H,34,39)(H,36,40)/t25-,27-,28-,29-/m0/s1" D0R InChIKey InChI 1.03 IQKWCORIMSRQGZ-AMEOFWRWSA-N D0R SMILES_CANONICAL CACTVS 3.370 "CC(C)[C@H](NC(=O)N(C)Cc1csc(n1)C(C)C)C(=O)N[C@H](C[C@H](O)[C@@H](N)Cc2ccccc2)Cc3ccccc3" D0R SMILES CACTVS 3.370 "CC(C)[CH](NC(=O)N(C)Cc1csc(n1)C(C)C)C(=O)N[CH](C[CH](O)[CH](N)Cc2ccccc2)Cc3ccccc3" D0R SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "CC(C)c1nc(cs1)CN(C)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](Cc2ccccc2)C[C@@H]([C@H](Cc3ccccc3)N)O" D0R SMILES "OpenEye OEToolkits" 1.7.2 "CC(C)c1nc(cs1)CN(C)C(=O)NC(C(C)C)C(=O)NC(Cc2ccccc2)CC(C(Cc3ccccc3)N)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier D0R "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(2S,4S,5S)-5-amino-4-hydroxy-1,6-diphenylhexan-2-yl]-N~2~-(methyl{[2-(propan-2-yl)-1,3-thiazol-4-yl]methyl}carbamoyl)-L-valinamide" D0R "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "(2S)-N-[(2S,4S,5S)-5-azanyl-4-oxidanyl-1,6-diphenyl-hexan-2-yl]-3-methyl-2-[[methyl-[(2-propan-2-yl-1,3-thiazol-4-yl)methyl]carbamoyl]amino]butanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site D0R "Create component" 2011-08-26 RCSB D0R "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id D0R _pdbx_chem_comp_synonyms.name "desthiazolylmethyloxycarbonyl ritonavir" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##