data_D0W # _chem_comp.id D0W _chem_comp.name Sampatrilat-Asp _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H33 N3 O10" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-12-15 _chem_comp.pdbx_modified_date 2018-03-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 535.544 _chem_comp.one_letter_code ? _chem_comp.three_letter_code D0W _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6F9R _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal D0W C10 C1 C 0 1 N N N 1.180 13.972 26.345 -3.984 -0.083 -1.035 C10 D0W 1 D0W N12 N1 N 0 1 N N N 1.653 13.986 24.961 -2.804 -0.456 -0.502 N12 D0W 2 D0W C13 C2 C 0 1 N N N 2.090 15.239 24.373 -1.710 -0.889 -1.374 C13 D0W 3 D0W C15 C3 C 0 1 N N N 1.667 17.060 22.792 0.688 -1.587 -1.437 C15 D0W 4 D0W C17 C4 C 0 1 N N N 1.738 19.063 21.265 3.150 -2.146 -1.486 C17 D0W 5 D0W C20 C5 C 0 1 N N N -0.364 18.066 21.920 1.739 -3.214 0.194 C20 D0W 6 D0W C21 C6 C 0 1 N N N 1.068 16.886 20.300 2.197 -0.751 0.365 C21 D0W 7 D0W C24 C7 C 0 1 N N S 0.085 16.355 18.060 2.658 1.602 0.800 C24 D0W 8 D0W C26 C8 C 0 1 Y N N -2.134 17.622 17.657 4.967 2.075 0.028 C26 D0W 9 D0W C28 C9 C 0 1 Y N N -3.887 18.535 18.995 6.588 0.881 -1.268 C28 D0W 10 D0W C01 C10 C 0 1 N N N 3.520 12.295 29.737 -7.646 2.372 -2.184 C01 D0W 11 D0W C02 C11 C 0 1 N N N 2.825 12.377 28.375 -6.396 1.975 -1.441 C02 D0W 12 D0W C05 C12 C 0 1 N N S 0.713 12.695 27.043 -5.107 0.369 -0.138 C05 D0W 13 D0W C06 C13 C 0 1 N N N -0.795 12.786 27.290 -5.482 -0.763 0.820 C06 D0W 14 D0W C07 C14 C 0 1 N N N -1.364 11.503 27.883 -6.446 -0.247 1.857 C07 D0W 15 D0W C14 C15 C 0 1 N N S 1.207 15.655 23.184 -0.492 -1.255 -0.523 C14 D0W 16 D0W C16 C16 C 0 1 N N N 0.939 17.694 21.604 1.924 -1.888 -0.586 C16 D0W 17 D0W C18 C17 C 0 1 N N N 0.664 20.209 21.411 3.960 -3.268 -0.814 C18 D0W 18 D0W C19 C18 C 0 1 N N N -0.586 19.598 21.299 3.199 -3.653 0.471 C19 D0W 19 D0W C25 C19 C 0 1 N N N -1.231 16.437 17.293 3.581 2.649 0.174 C25 D0W 20 D0W C27 C20 C 0 1 Y N N -3.066 17.473 18.659 5.319 1.408 -1.131 C27 D0W 21 D0W C29 C21 C 0 1 Y N N -3.784 19.742 18.324 7.511 1.022 -0.241 C29 D0W 22 D0W C30 C22 C 0 1 Y N N -2.850 19.897 17.306 7.158 1.701 0.916 C30 D0W 23 D0W C31 C23 C 0 1 Y N N -2.017 18.831 16.979 5.886 2.221 1.050 C31 D0W 24 D0W C33 C24 C 0 1 N N N 1.177 17.088 17.301 1.306 2.214 1.060 C33 D0W 25 D0W C36 C25 C 0 1 N N N -0.270 15.642 23.581 -0.819 -2.452 0.332 C36 D0W 26 D0W N04 N2 N 0 1 N N N 1.392 12.602 28.320 -6.271 0.725 -0.954 N04 D0W 27 D0W N23 N3 N 0 1 N N N 0.015 17.014 19.351 2.513 0.468 -0.116 N23 D0W 28 D0W O03 O1 O 0 1 N N N 3.442 12.255 27.369 -5.504 2.780 -1.281 O03 D0W 29 D0W O08 O2 O 0 1 N N N -2.083 11.555 28.919 -6.861 -1.051 2.847 O08 D0W 30 D0W O09 O3 O 0 1 N N N -1.111 10.401 27.330 -6.844 0.892 1.796 O09 D0W 31 D0W O11 O4 O 0 1 N N N 1.138 14.981 26.956 -4.140 -0.106 -2.238 O11 D0W 32 D0W O22 O5 O 0 1 N N N 2.042 16.218 20.085 2.132 -0.932 1.562 O22 D0W 33 D0W O32 O6 O 0 1 N N N -4.644 20.790 18.694 8.760 0.504 -0.373 O32 D0W 34 D0W O34 O7 O 0 1 N N N 1.481 18.279 17.615 1.195 3.274 1.876 O34 D0W 35 D0W O35 O8 O 0 1 N N N 1.778 16.507 16.361 0.322 1.751 0.533 O35 D0W 36 D0W O37 O9 O 0 1 N N N -0.711 16.314 24.558 -0.972 -2.309 1.658 O37 D0W 37 D0W O38 O10 O 0 1 N N N -1.095 14.947 22.937 -0.942 -3.541 -0.176 O38 D0W 38 D0W H121 H1 H 0 0 N N N 1.675 13.142 24.426 -2.679 -0.437 0.460 H121 D0W 39 D0W H131 H2 H 0 0 N N N 3.127 15.125 24.023 -2.026 -1.760 -1.949 H131 D0W 40 D0W H132 H3 H 0 0 N N N 2.047 16.026 25.140 -1.446 -0.080 -2.056 H132 D0W 41 D0W H151 H4 H 0 0 N N N 2.737 17.007 22.542 0.444 -2.460 -2.043 H151 D0W 42 D0W H152 H5 H 0 0 N N N 1.526 17.716 23.663 0.894 -0.738 -2.089 H152 D0W 43 D0W H172 H6 H 0 0 N N N 2.136 19.035 20.240 2.826 -2.462 -2.477 H172 D0W 44 D0W H171 H7 H 0 0 N N N 2.564 19.215 21.975 3.755 -1.242 -1.561 H171 D0W 45 D0W H202 H8 H 0 0 N N N -0.502 18.075 23.011 1.204 -3.041 1.127 H202 D0W 46 D0W H201 H9 H 0 0 N N N -1.080 17.365 21.466 1.220 -3.952 -0.417 H201 D0W 47 D0W H241 H10 H 0 0 N N N 0.370 15.300 18.183 3.087 1.256 1.741 H241 D0W 48 D0W H281 H11 H 0 0 N N N -4.613 18.422 19.786 6.863 0.360 -2.173 H281 D0W 49 D0W H011 H12 H 0 0 N N N 4.596 12.118 29.590 -8.328 1.524 -2.227 H011 D0W 50 D0W H012 H13 H 0 0 N N N 3.375 13.241 30.280 -8.128 3.201 -1.665 H012 D0W 51 D0W H013 H14 H 0 0 N N N 3.089 11.468 30.319 -7.384 2.680 -3.196 H013 D0W 52 D0W H051 H15 H 0 0 N N N 0.936 11.821 26.413 -4.786 1.239 0.436 H051 D0W 53 D0W H061 H16 H 0 0 N N N -0.990 13.614 27.987 -5.951 -1.573 0.259 H061 D0W 54 D0W H062 H17 H 0 0 N N N -1.298 12.987 26.333 -4.583 -1.135 1.312 H062 D0W 55 D0W H141 H18 H 0 0 N N N 1.371 14.964 22.344 -0.230 -0.412 0.117 H141 D0W 56 D0W H181 H19 H 0 0 N N N 0.761 20.698 22.391 4.029 -4.128 -1.479 H181 D0W 57 D0W H182 H20 H 0 0 N N N 0.795 20.956 20.614 4.959 -2.909 -0.563 H182 D0W 58 D0W H192 H21 H 0 0 N N N -1.340 20.147 21.882 3.602 -3.115 1.329 H192 D0W 59 D0W H191 H22 H 0 0 N N N -0.901 19.548 20.246 3.248 -4.729 0.636 H191 D0W 60 D0W H252 H23 H 0 0 N N N -1.793 15.511 17.484 3.199 2.930 -0.808 H252 D0W 61 D0W H251 H24 H 0 0 N N N -0.995 16.508 16.221 3.619 3.530 0.815 H251 D0W 62 D0W H271 H25 H 0 0 N N N -3.156 16.532 19.181 4.600 1.298 -1.930 H271 D0W 63 D0W H301 H26 H 0 0 N N N -2.772 20.834 16.775 7.877 1.819 1.714 H301 D0W 64 D0W H311 H27 H 0 0 N N N -1.279 18.943 16.198 5.609 2.743 1.954 H311 D0W 65 D0W H041 H28 H 0 0 N N N 0.870 12.693 29.168 -6.951 0.060 -1.144 H041 D0W 66 D0W H231 H29 H 0 0 N N N -0.787 17.567 19.578 2.645 0.595 -1.069 H231 D0W 67 D0W H1 H30 H 0 1 N N N -2.358 10.678 29.159 -7.479 -0.675 3.489 H1 D0W 68 D0W H321 H31 H 0 0 N N N -5.208 20.502 19.402 9.400 1.114 -0.765 H321 D0W 69 D0W H2 H32 H 0 1 N N N 2.178 18.588 17.048 0.307 3.632 2.011 H2 D0W 70 D0W H3 H33 H 0 1 N N N -1.646 16.171 24.645 -1.181 -3.105 2.165 H3 D0W 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal D0W O35 C33 DOUB N N 1 D0W C31 C30 DOUB Y N 2 D0W C31 C26 SING Y N 3 D0W C25 C26 SING N N 4 D0W C25 C24 SING N N 5 D0W C33 O34 SING N N 6 D0W C33 C24 SING N N 7 D0W C30 C29 SING Y N 8 D0W C26 C27 DOUB Y N 9 D0W C24 N23 SING N N 10 D0W C29 O32 SING N N 11 D0W C29 C28 DOUB Y N 12 D0W C27 C28 SING Y N 13 D0W N23 C21 SING N N 14 D0W O22 C21 DOUB N N 15 D0W C21 C16 SING N N 16 D0W C17 C18 SING N N 17 D0W C17 C16 SING N N 18 D0W C19 C18 SING N N 19 D0W C19 C20 SING N N 20 D0W C16 C20 SING N N 21 D0W C16 C15 SING N N 22 D0W C15 C14 SING N N 23 D0W O38 C36 DOUB N N 24 D0W C14 C36 SING N N 25 D0W C14 C13 SING N N 26 D0W C36 O37 SING N N 27 D0W C13 N12 SING N N 28 D0W N12 C10 SING N N 29 D0W C10 O11 DOUB N N 30 D0W C10 C05 SING N N 31 D0W C05 C06 SING N N 32 D0W C05 N04 SING N N 33 D0W C06 C07 SING N N 34 D0W O09 C07 DOUB N N 35 D0W O03 C02 DOUB N N 36 D0W C07 O08 SING N N 37 D0W N04 C02 SING N N 38 D0W C02 C01 SING N N 39 D0W N12 H121 SING N N 40 D0W C13 H131 SING N N 41 D0W C13 H132 SING N N 42 D0W C15 H151 SING N N 43 D0W C15 H152 SING N N 44 D0W C17 H172 SING N N 45 D0W C17 H171 SING N N 46 D0W C20 H202 SING N N 47 D0W C20 H201 SING N N 48 D0W C24 H241 SING N N 49 D0W C28 H281 SING N N 50 D0W C01 H011 SING N N 51 D0W C01 H012 SING N N 52 D0W C01 H013 SING N N 53 D0W C05 H051 SING N N 54 D0W C06 H061 SING N N 55 D0W C06 H062 SING N N 56 D0W C14 H141 SING N N 57 D0W C18 H181 SING N N 58 D0W C18 H182 SING N N 59 D0W C19 H192 SING N N 60 D0W C19 H191 SING N N 61 D0W C25 H252 SING N N 62 D0W C25 H251 SING N N 63 D0W C27 H271 SING N N 64 D0W C30 H301 SING N N 65 D0W C31 H311 SING N N 66 D0W N04 H041 SING N N 67 D0W N23 H231 SING N N 68 D0W O08 H1 SING N N 69 D0W O32 H321 SING N N 70 D0W O34 H2 SING N N 71 D0W O37 H3 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor D0W InChI InChI 1.03 "InChI=1S/C25H33N3O10/c1-14(29)27-18(11-20(31)32)21(33)26-13-16(22(34)35)12-25(8-2-3-9-25)24(38)28-19(23(36)37)10-15-4-6-17(30)7-5-15/h4-7,16,18-19,30H,2-3,8-13H2,1H3,(H,26,33)(H,27,29)(H,28,38)(H,31,32)(H,34,35)(H,36,37)/t16-,18-,19-/m0/s1" D0W InChIKey InChI 1.03 ZQIWHIVXBQEYTN-WDSOQIARSA-N D0W SMILES_CANONICAL CACTVS 3.385 "CC(=O)N[C@@H](CC(O)=O)C(=O)NC[C@H](CC1(CCCC1)C(=O)N[C@@H](Cc2ccc(O)cc2)C(O)=O)C(O)=O" D0W SMILES CACTVS 3.385 "CC(=O)N[CH](CC(O)=O)C(=O)NC[CH](CC1(CCCC1)C(=O)N[CH](Cc2ccc(O)cc2)C(O)=O)C(O)=O" D0W SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC(=O)N[C@@H](CC(=O)O)C(=O)NC[C@H](CC1(CCCC1)C(=O)N[C@@H](Cc2ccc(cc2)O)C(=O)O)C(=O)O" D0W SMILES "OpenEye OEToolkits" 2.0.6 "CC(=O)NC(CC(=O)O)C(=O)NCC(CC1(CCCC1)C(=O)NC(Cc2ccc(cc2)O)C(=O)O)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier D0W "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(3~{S})-3-acetamido-4-[[(2~{S})-2-[[1-[[(2~{S})-3-(4-hydroxyphenyl)-1-oxidanyl-1-oxidanylidene-propan-2-yl]carbamoyl]cyclopentyl]methyl]-3-oxidanyl-3-oxidanylidene-propyl]amino]-4-oxidanylidene-butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site D0W "Create component" 2017-12-15 EBI D0W "Initial release" 2018-03-07 RCSB #