data_D31 # _chem_comp.id D31 _chem_comp.name "2-(4-(AMINOMETHYL)PIPERIDIN-1-YL)-N-(3_CYCLOHEXYL-4-OXO-2,4-DIHYDROINDENO[1,2-C]PYRAZOL-5-YL)ACETAMIDE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H31 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms DIN-101312 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2005-09-28 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 421.535 _chem_comp.one_letter_code ? _chem_comp.three_letter_code D31 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2B55 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal D31 N1 N1 N 0 1 N N N 29.094 7.515 10.431 -9.580 -0.027 0.247 N1 D31 1 D31 C2 C2 C 0 1 N N N 28.532 7.190 11.759 -8.768 -0.961 -0.543 C2 D31 2 D31 C3 C3 C 0 1 N N N 29.559 6.526 12.685 -7.398 -1.132 0.117 C3 D31 3 D31 C6 C6 C 0 1 N N N 28.915 6.170 14.029 -6.596 -2.199 -0.634 C6 D31 4 D31 C7 C7 C 0 1 N N N 28.554 7.390 14.876 -5.189 -2.282 -0.040 C7 D31 5 D31 N8 N8 N 0 1 N N N 29.712 8.297 15.029 -4.506 -0.994 -0.200 N8 D31 6 D31 C9 C9 C 0 1 N N N 30.373 8.702 13.772 -5.225 -0.013 0.621 C9 D31 7 D31 C10 C10 C 0 1 N N N 30.734 7.480 12.932 -6.634 0.195 0.062 C10 D31 8 D31 C20 C20 C 0 1 N N N 29.993 8.999 16.291 -3.172 -1.146 0.397 C20 D31 9 D31 C21 C21 C 0 1 N N N 29.599 10.467 16.259 -2.328 0.054 0.053 C21 D31 10 D31 N24 N24 N 0 1 N N N 28.740 10.870 15.322 -1.057 0.134 0.496 N24 D31 11 D31 C25 C25 C 0 1 Y N N 28.171 12.158 15.156 -0.319 1.295 0.287 C25 D31 12 D31 C26 C26 C 0 1 Y N N 28.479 13.343 15.985 -0.962 2.526 0.207 C26 D31 13 D31 C27 C27 C 0 1 Y N N 27.861 14.635 15.643 -0.233 3.678 0.000 C27 D31 14 D31 C28 C28 C 0 1 Y N N 26.942 14.728 14.493 1.146 3.624 -0.132 C28 D31 15 D31 C29 C29 C 0 1 Y N N 26.644 13.543 13.680 1.809 2.407 -0.055 C29 D31 16 D31 C30 C30 C 0 1 Y N N 27.255 12.249 14.005 1.075 1.228 0.162 C30 D31 17 D31 C31 C31 C 0 1 Y N N 25.885 13.331 12.466 3.249 2.062 -0.159 C31 D31 18 D31 C32 C32 C 0 1 Y N N 26.054 11.957 12.058 3.369 0.610 -0.001 C32 D31 19 D31 C33 C33 C 0 1 N N N 26.885 11.253 13.014 2.007 0.083 0.198 C33 D31 20 D31 N34 N34 N 0 1 Y N N 24.772 13.024 10.491 5.366 1.464 -0.301 N34 D31 21 D31 C35 C35 C 0 1 Y N N 25.355 11.775 10.802 4.696 0.312 -0.099 C35 D31 22 D31 C36 C36 C 0 1 N N N 25.202 10.526 9.953 5.306 -1.062 0.001 C36 D31 23 D31 C37 C37 C 0 1 N N N 24.145 10.580 8.846 6.044 -1.389 -1.299 C37 D31 24 D31 C38 C38 C 0 1 N N N 23.908 9.226 8.180 6.663 -2.784 -1.197 C38 D31 25 D31 C39 C39 C 0 1 N N N 25.222 8.629 7.683 7.649 -2.821 -0.028 C39 D31 26 D31 C40 C40 C 0 1 N N N 26.240 8.484 8.826 6.911 -2.494 1.272 C40 D31 27 D31 C41 C41 C 0 1 N N N 26.492 9.837 9.502 6.292 -1.099 1.171 C41 D31 28 D31 O53 O53 O 0 1 N N N 30.026 11.266 17.091 -2.791 0.948 -0.622 O53 D31 29 D31 O54 O54 O 0 1 N N N 27.196 10.067 13.009 1.705 -1.083 0.364 O54 D31 30 D31 N55 N55 N 0 1 Y N N 25.106 14.064 11.544 4.460 2.530 -0.335 N55 D31 31 D31 HN11 1HN1 H 0 0 N N N 28.411 7.956 9.815 -9.132 0.875 0.180 HN11 D31 32 D31 HN12 2HN1 H 0 0 N N N 29.502 6.689 9.993 -10.469 0.054 -0.223 HN12 D31 33 D31 H21 1H2 H 0 1 N N N 28.085 8.092 12.237 -9.270 -1.927 -0.592 H21 D31 34 D31 H22 2H2 H 0 1 N N N 27.614 6.564 11.664 -8.639 -0.567 -1.551 H22 D31 35 D31 H3 H3 H 0 1 N N N 29.925 5.594 12.193 -7.529 -1.437 1.155 H3 D31 36 D31 H61 1H6 H 0 1 N N N 28.023 5.516 13.878 -7.091 -3.165 -0.534 H61 D31 37 D31 H62 2H6 H 0 1 N N N 29.564 5.469 14.603 -6.530 -1.930 -1.689 H62 D31 38 D31 H71 1H7 H 0 1 N N N 27.665 7.925 14.466 -5.257 -2.526 1.020 H71 D31 39 D31 H72 2H7 H 0 1 N N N 28.133 7.092 15.864 -4.623 -3.058 -0.554 H72 D31 40 D31 H91 1H9 H 0 1 N N N 29.755 9.430 13.196 -5.291 -0.378 1.646 H91 D31 41 D31 H92 2H9 H 0 1 N N N 31.261 9.348 13.962 -4.687 0.935 0.608 H92 D31 42 D31 H101 1H10 H 0 0 N N N 31.594 6.933 13.384 -6.570 0.536 -0.971 H101 D31 43 D31 H102 2H10 H 0 0 N N N 31.196 7.791 11.966 -7.156 0.941 0.661 H102 D31 44 D31 H201 1H20 H 0 0 N N N 29.511 8.477 17.151 -3.265 -1.226 1.480 H201 D31 45 D31 H202 2H20 H 0 0 N N N 31.063 8.881 16.580 -2.699 -2.047 0.005 H202 D31 46 D31 H24 H24 H 0 1 N N N 28.495 10.123 14.671 -0.658 -0.618 0.961 H24 D31 47 D31 H26 H26 H 0 1 N N N 29.161 13.264 16.848 -2.036 2.580 0.308 H26 D31 48 D31 H27 H27 H 0 1 N N N 28.085 15.530 16.246 -0.740 4.630 -0.061 H27 D31 49 D31 H28 H28 H 0 1 N N N 26.472 15.693 14.238 1.706 4.533 -0.294 H28 D31 50 D31 H34 H34 H 0 1 N N N 24.207 13.152 9.651 6.327 1.542 -0.406 H34 D31 51 D31 H36 H36 H 0 1 N N N 24.776 9.840 10.722 4.518 -1.798 0.167 H36 D31 52 D31 H371 1H37 H 0 0 N N N 23.189 11.007 9.229 5.341 -1.362 -2.132 H371 D31 53 D31 H372 2H37 H 0 0 N N N 24.401 11.356 8.088 6.831 -0.653 -1.464 H372 D31 54 D31 H381 1H38 H 0 0 N N N 23.364 8.523 8.854 5.876 -3.520 -1.032 H381 D31 55 D31 H382 2H38 H 0 0 N N N 23.151 9.294 7.364 7.189 -3.016 -2.123 H382 D31 56 D31 H391 1H39 H 0 0 N N N 25.057 7.659 7.157 8.090 -3.815 0.044 H391 D31 57 D31 H392 2H39 H 0 0 N N N 25.642 9.216 6.833 8.436 -2.085 -0.193 H392 D31 58 D31 H401 1H40 H 0 0 N N N 25.927 7.706 9.561 6.124 -3.230 1.437 H401 D31 59 D31 H402 2H40 H 0 0 N N N 27.188 8.013 8.477 7.613 -2.521 2.105 H402 D31 60 D31 H411 1H41 H 0 0 N N N 27.092 10.506 8.842 7.079 -0.363 1.005 H411 D31 61 D31 H412 2H41 H 0 0 N N N 27.206 9.731 10.351 5.766 -0.866 2.097 H412 D31 62 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal D31 N1 C2 SING N N 1 D31 N1 HN11 SING N N 2 D31 N1 HN12 SING N N 3 D31 C2 C3 SING N N 4 D31 C2 H21 SING N N 5 D31 C2 H22 SING N N 6 D31 C3 C6 SING N N 7 D31 C3 C10 SING N N 8 D31 C3 H3 SING N N 9 D31 C6 C7 SING N N 10 D31 C6 H61 SING N N 11 D31 C6 H62 SING N N 12 D31 C7 N8 SING N N 13 D31 C7 H71 SING N N 14 D31 C7 H72 SING N N 15 D31 N8 C9 SING N N 16 D31 N8 C20 SING N N 17 D31 C9 C10 SING N N 18 D31 C9 H91 SING N N 19 D31 C9 H92 SING N N 20 D31 C10 H101 SING N N 21 D31 C10 H102 SING N N 22 D31 C20 C21 SING N N 23 D31 C20 H201 SING N N 24 D31 C20 H202 SING N N 25 D31 C21 N24 SING N N 26 D31 C21 O53 DOUB N N 27 D31 N24 C25 SING N N 28 D31 N24 H24 SING N N 29 D31 C25 C26 DOUB Y N 30 D31 C25 C30 SING Y N 31 D31 C26 C27 SING Y N 32 D31 C26 H26 SING N N 33 D31 C27 C28 DOUB Y N 34 D31 C27 H27 SING N N 35 D31 C28 C29 SING Y N 36 D31 C28 H28 SING N N 37 D31 C29 C30 DOUB Y N 38 D31 C29 C31 SING Y N 39 D31 C30 C33 SING N N 40 D31 C31 C32 SING Y N 41 D31 C31 N55 DOUB Y N 42 D31 C32 C33 SING N N 43 D31 C32 C35 DOUB Y N 44 D31 C33 O54 DOUB N N 45 D31 N34 C35 SING Y N 46 D31 N34 N55 SING Y N 47 D31 N34 H34 SING N N 48 D31 C35 C36 SING N N 49 D31 C36 C37 SING N N 50 D31 C36 C41 SING N N 51 D31 C36 H36 SING N N 52 D31 C37 C38 SING N N 53 D31 C37 H371 SING N N 54 D31 C37 H372 SING N N 55 D31 C38 C39 SING N N 56 D31 C38 H381 SING N N 57 D31 C38 H382 SING N N 58 D31 C39 C40 SING N N 59 D31 C39 H391 SING N N 60 D31 C39 H392 SING N N 61 D31 C40 C41 SING N N 62 D31 C40 H401 SING N N 63 D31 C40 H402 SING N N 64 D31 C41 H411 SING N N 65 D31 C41 H412 SING N N 66 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor D31 SMILES ACDLabs 10.04 "O=C(Nc3cccc2c1nnc(c1C(=O)c23)C4CCCCC4)CN5CCC(CC5)CN" D31 SMILES_CANONICAL CACTVS 3.341 "NCC1CCN(CC1)CC(=O)Nc2cccc3c4n[nH]c(C5CCCCC5)c4C(=O)c23" D31 SMILES CACTVS 3.341 "NCC1CCN(CC1)CC(=O)Nc2cccc3c4n[nH]c(C5CCCCC5)c4C(=O)c23" D31 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1cc-2c(c(c1)NC(=O)CN3CCC(CC3)CN)C(=O)c4c2n[nH]c4C5CCCCC5" D31 SMILES "OpenEye OEToolkits" 1.5.0 "c1cc-2c(c(c1)NC(=O)CN3CCC(CC3)CN)C(=O)c4c2n[nH]c4C5CCCCC5" D31 InChI InChI 1.03 "InChI=1S/C24H31N5O2/c25-13-15-9-11-29(12-10-15)14-19(30)26-18-8-4-7-17-20(18)24(31)21-22(27-28-23(17)21)16-5-2-1-3-6-16/h4,7-8,15-16H,1-3,5-6,9-14,25H2,(H,26,30)(H,27,28)" D31 InChIKey InChI 1.03 AITZHKQVQNLKHI-UHFFFAOYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier D31 "SYSTEMATIC NAME" ACDLabs 10.04 "2-[4-(aminomethyl)piperidin-1-yl]-N-(3-cyclohexyl-4-oxo-2,4-dihydroindeno[1,2-c]pyrazol-5-yl)acetamide" D31 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[4-(aminomethyl)piperidin-1-yl]-N-(3-cyclohexyl-4-oxo-2H-indeno[1,2-c]pyrazol-5-yl)ethanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site D31 "Create component" 2005-09-28 RCSB D31 "Modify aromatic_flag" 2011-06-04 RCSB D31 "Modify descriptor" 2011-06-04 RCSB D31 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id D31 _pdbx_chem_comp_synonyms.name DIN-101312 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##