data_D3I
# 
_chem_comp.id                                    D3I 
_chem_comp.name                                  "octaaqua-dirhodium (II, II) fragment" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "H2 O2 Rh2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-12-14 
_chem_comp.pdbx_modified_date                    2022-08-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        239.826 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     D3I 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7QHR 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
D3I RH3 RH1 RH 0 0 N N N 28.783 -11.577 18.023 0.889  -0.000 0.001  RH3 D3I 1 
D3I RH4 RH2 RH 0 0 N N N 29.409 -13.941 17.756 -1.471 0.000  -0.000 RH4 D3I 2 
D3I O14 O1  O  0 1 N N N 30.567 -10.940 18.877 1.794  -1.567 -0.002 O14 D3I 3 
D3I O15 O2  O  0 1 N N N 29.592 -11.146 16.159 1.794  1.567  -0.002 O15 D3I 4 
D3I H1  H1  H  0 1 N N N 30.513 -11.021 19.822 1.226  -2.350 -0.000 H1  D3I 5 
D3I H2  H2  H  0 1 N N N 28.957 -11.349 15.483 1.226  2.350  -0.000 H2  D3I 6 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
D3I RH3 O14 SING N N 1 
D3I RH3 O15 SING N N 2 
D3I RH3 RH4 SING N N 3 
D3I O14 H1  SING N N 4 
D3I O15 H2  SING N N 5 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
D3I InChI            InChI                1.06  InChI=1S/2H2O.2Rh/h2*1H2;;/q;;;+2/p-2 
D3I InChIKey         InChI                1.06  PVWOYIBLLHKGIL-UHFFFAOYSA-L           
D3I SMILES_CANONICAL CACTVS               3.385 "O[Rh](O)[Rh]"                        
D3I SMILES           CACTVS               3.385 "O[Rh](O)[Rh]"                        
D3I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "O[Rh](O)[Rh]"                        
D3I SMILES           "OpenEye OEToolkits" 2.0.7 "O[Rh](O)[Rh]"                        
# 
_pdbx_chem_comp_identifier.comp_id           D3I 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "bis(oxidanyl)-rhodio-rhodium" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
D3I "Create component"  2021-12-14 PDBE 
D3I "Modify name"       2022-03-30 PDBE 
D3I "Initial release"   2022-06-08 RCSB 
D3I "Modify descriptor" 2022-08-22 RCSB 
#