data_D3J # _chem_comp.id D3J _chem_comp.name "(2R)-5-[(2-chlorophenyl)sulfanyl]-6'-(4-fluorophenoxy)-4-hydroxy-2-(thiophen-3-yl)-2,3-dihydro[2,2'-bipyridin]-6(1H)-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H18 Cl F N2 O3 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-10-17 _chem_comp.pdbx_modified_date 2018-10-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 525.014 _chem_comp.one_letter_code ? _chem_comp.three_letter_code D3J _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6BB1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal D3J C4 C1 C 0 1 Y N N 14.596 39.870 170.282 -1.350 4.631 0.688 C4 D3J 1 D3J C14 C2 C 0 1 N N N 11.869 42.600 176.537 0.558 -0.382 -0.689 C14 D3J 2 D3J C5 C3 C 0 1 Y N N 16.734 38.377 171.305 -2.220 3.294 -1.576 C5 D3J 3 D3J C6 C4 C 0 1 Y N N 15.427 38.104 171.709 -2.244 2.658 -0.350 C6 D3J 4 D3J C11 C5 C 0 1 Y N N 11.908 41.407 173.519 -1.995 -0.714 1.105 C11 D3J 5 D3J C7 C6 C 0 1 Y N N 14.351 38.863 171.223 -1.814 3.327 0.787 C7 D3J 6 D3J C9 C7 C 0 1 Y N N 12.252 39.425 172.294 -2.181 1.392 2.027 C9 D3J 7 D3J C12 C8 C 0 1 N N R 12.481 42.682 174.153 -1.427 -1.605 0.030 C12 D3J 8 D3J C3 C9 C 0 1 Y N N 15.900 40.153 169.886 -1.322 5.262 -0.540 C3 D3J 9 D3J F1 F1 F 0 1 N N N 18.223 39.684 169.986 -1.728 5.213 -2.873 F1 D3J 10 D3J C2 C10 C 0 1 Y N N 16.965 39.411 170.396 -1.757 4.595 -1.673 C2 D3J 11 D3J O8 O1 O 0 1 N N N 13.075 38.558 171.622 -1.847 2.707 1.995 O8 D3J 12 D3J N10 N1 N 0 1 Y N N 12.710 40.538 172.889 -1.700 0.572 1.107 N10 D3J 13 D3J N13 N2 N 0 1 N N N 11.657 43.100 175.303 -0.704 -0.779 -0.937 N13 D3J 14 D3J C15 C11 C 0 1 N N N 12.951 41.633 176.738 1.263 -0.893 0.490 C15 D3J 15 D3J S16 S1 S 0 1 N N N 12.909 40.603 178.169 2.756 -0.130 1.032 S16 D3J 16 D3J C17 C12 C 0 1 Y N N 12.145 39.094 177.656 3.898 -0.543 -0.245 C17 D3J 17 D3J C18 C13 C 0 1 Y N N 11.610 38.258 178.652 5.237 -0.188 -0.124 C18 D3J 18 D3J C19 C14 C 0 1 Y N N 10.964 37.077 178.282 6.130 -0.514 -1.127 C19 D3J 19 D3J C20 C15 C 0 1 Y N N 10.846 36.729 176.936 5.692 -1.193 -2.250 C20 D3J 20 D3J C21 C16 C 0 1 Y N N 11.392 37.553 175.948 4.361 -1.548 -2.373 C21 D3J 21 D3J C22 C17 C 0 1 Y N N 12.051 38.728 176.302 3.464 -1.230 -1.372 C22 D3J 22 D3J CL23 CL1 CL 0 0 N N N 11.769 38.712 180.337 5.786 0.665 1.285 CL23 D3J 23 D3J C24 C18 C 0 1 N N N 13.949 41.579 175.818 0.761 -1.951 1.157 C24 D3J 24 D3J O25 O2 O 0 1 N N N 14.962 40.707 175.920 1.382 -2.405 2.268 O25 D3J 25 D3J C26 C19 C 0 1 N N N 13.926 42.468 174.611 -0.492 -2.625 0.664 C26 D3J 26 D3J O27 O3 O 0 1 N N N 11.179 42.943 177.469 1.113 0.395 -1.443 O27 D3J 27 D3J C28 C20 C 0 1 Y N N 12.525 43.834 173.179 -2.552 -2.325 -0.667 C28 D3J 28 D3J C29 C21 C 0 1 Y N N 12.202 43.683 171.894 -3.012 -3.508 -0.255 C29 D3J 29 D3J S30 S2 S 0 1 Y N N 12.363 45.224 171.090 -4.323 -4.029 -1.305 S30 D3J 30 D3J C31 C22 C 0 1 Y N N 12.898 46.016 172.569 -4.169 -2.569 -2.273 C31 D3J 31 D3J C32 C23 C 0 1 Y N N 12.914 45.121 173.551 -3.191 -1.807 -1.781 C32 D3J 32 D3J C33 C24 C 0 1 Y N N 10.534 41.142 173.581 -2.822 -1.253 2.070 C33 D3J 33 D3J C34 C25 C 0 1 Y N N 10.010 39.984 172.996 -3.342 -0.427 3.057 C34 D3J 34 D3J C35 C26 C 0 1 Y N N 10.885 39.119 172.348 -3.010 0.917 3.035 C35 D3J 35 D3J H1 H1 H 0 1 N N N 13.772 40.428 169.863 -1.016 5.154 1.572 H1 D3J 36 D3J H2 H2 H 0 1 N N N 17.558 37.795 171.691 -2.555 2.773 -2.461 H2 D3J 37 D3J H3 H3 H 0 1 N N N 15.241 37.299 172.404 -2.598 1.640 -0.276 H3 D3J 38 D3J H4 H4 H 0 1 N N N 16.088 40.950 169.182 -0.961 6.277 -0.617 H4 D3J 39 D3J H5 H5 H 0 1 N N N 10.926 43.768 175.164 -1.138 -0.515 -1.763 H5 D3J 40 D3J H6 H6 H 0 1 N N N 10.553 36.429 179.042 7.170 -0.239 -1.034 H6 D3J 41 D3J H7 H7 H 0 1 N N N 10.332 35.821 176.657 6.392 -1.446 -3.033 H7 D3J 42 D3J H8 H8 H 0 1 N N N 11.303 37.278 174.907 4.024 -2.082 -3.249 H8 D3J 43 D3J H9 H9 H 0 1 N N N 12.488 39.355 175.539 2.425 -1.508 -1.469 H9 D3J 44 D3J H10 H10 H 0 1 N N N 14.868 40.204 176.720 2.131 -1.863 2.550 H10 D3J 45 D3J H11 H11 H 0 1 N N N 14.500 41.997 173.800 -0.999 -3.111 1.498 H11 D3J 46 D3J H12 H12 H 0 1 N N N 14.377 43.439 174.864 -0.221 -3.377 -0.078 H12 D3J 47 D3J H13 H13 H 0 1 N N N 11.892 42.760 171.428 -2.636 -4.061 0.593 H13 D3J 48 D3J H14 H14 H 0 1 N N N 13.168 47.057 172.663 -4.774 -2.326 -3.134 H14 D3J 49 D3J H15 H15 H 0 1 N N N 13.206 45.371 174.560 -2.921 -0.856 -2.215 H15 D3J 50 D3J H16 H16 H 0 1 N N N 9.875 41.835 174.083 -3.062 -2.306 2.058 H16 D3J 51 D3J H17 H17 H 0 1 N N N 8.953 39.768 173.046 -3.992 -0.823 3.823 H17 D3J 52 D3J H18 H18 H 0 1 N N N 10.513 38.215 171.888 -3.400 1.589 3.785 H18 D3J 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal D3J C3 C4 DOUB Y N 1 D3J C3 C2 SING Y N 2 D3J F1 C2 SING N N 3 D3J C4 C7 SING Y N 4 D3J C2 C5 DOUB Y N 5 D3J S30 C29 SING Y N 6 D3J S30 C31 SING Y N 7 D3J C7 O8 SING N N 8 D3J C7 C6 DOUB Y N 9 D3J C5 C6 SING Y N 10 D3J O8 C9 SING N N 11 D3J C29 C28 DOUB Y N 12 D3J C9 C35 DOUB Y N 13 D3J C9 N10 SING Y N 14 D3J C35 C34 SING Y N 15 D3J C31 C32 DOUB Y N 16 D3J N10 C11 DOUB Y N 17 D3J C34 C33 DOUB Y N 18 D3J C28 C32 SING Y N 19 D3J C28 C12 SING N N 20 D3J C11 C33 SING Y N 21 D3J C11 C12 SING N N 22 D3J C12 C26 SING N N 23 D3J C12 N13 SING N N 24 D3J C26 C24 SING N N 25 D3J N13 C14 SING N N 26 D3J C24 O25 SING N N 27 D3J C24 C15 DOUB N N 28 D3J C21 C22 DOUB Y N 29 D3J C21 C20 SING Y N 30 D3J C22 C17 SING Y N 31 D3J C14 C15 SING N N 32 D3J C14 O27 DOUB N N 33 D3J C15 S16 SING N N 34 D3J C20 C19 DOUB Y N 35 D3J C17 S16 SING N N 36 D3J C17 C18 DOUB Y N 37 D3J C19 C18 SING Y N 38 D3J C18 CL23 SING N N 39 D3J C4 H1 SING N N 40 D3J C5 H2 SING N N 41 D3J C6 H3 SING N N 42 D3J C3 H4 SING N N 43 D3J N13 H5 SING N N 44 D3J C19 H6 SING N N 45 D3J C20 H7 SING N N 46 D3J C21 H8 SING N N 47 D3J C22 H9 SING N N 48 D3J O25 H10 SING N N 49 D3J C26 H11 SING N N 50 D3J C26 H12 SING N N 51 D3J C29 H13 SING N N 52 D3J C31 H14 SING N N 53 D3J C32 H15 SING N N 54 D3J C33 H16 SING N N 55 D3J C34 H17 SING N N 56 D3J C35 H18 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor D3J SMILES ACDLabs 12.01 "c1c(ccc(c1)F)Oc5cccc(C2(CC(=C(C(=O)N2)Sc3c(Cl)cccc3)O)c4ccsc4)n5" D3J InChI InChI 1.03 "InChI=1S/C26H18ClFN2O3S2/c27-19-4-1-2-5-21(19)35-24-20(31)14-26(30-25(24)32,16-12-13-34-15-16)22-6-3-7-23(29-22)33-18-10-8-17(28)9-11-18/h1-13,15,31H,14H2,(H,30,32)/t26-/m1/s1" D3J InChIKey InChI 1.03 XFNQOQKMMIFYDK-AREMUKBSSA-N D3J SMILES_CANONICAL CACTVS 3.385 "OC1=C(Sc2ccccc2Cl)C(=O)N[C@](C1)(c3cscc3)c4cccc(Oc5ccc(F)cc5)n4" D3J SMILES CACTVS 3.385 "OC1=C(Sc2ccccc2Cl)C(=O)N[C](C1)(c3cscc3)c4cccc(Oc5ccc(F)cc5)n4" D3J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(c(c1)SC2=C(C[C@@](NC2=O)(c3ccsc3)c4cccc(n4)Oc5ccc(cc5)F)O)Cl" D3J SMILES "OpenEye OEToolkits" 2.0.6 "c1ccc(c(c1)SC2=C(CC(NC2=O)(c3ccsc3)c4cccc(n4)Oc5ccc(cc5)F)O)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier D3J "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-5-[(2-chlorophenyl)sulfanyl]-6'-(4-fluorophenoxy)-4-hydroxy-2-(thiophen-3-yl)-2,3-dihydro[2,2'-bipyridin]-6(1H)-one" D3J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{R})-5-(2-chlorophenyl)sulfanyl-2-[6-(4-fluoranylphenoxy)pyridin-2-yl]-4-oxidanyl-2-thiophen-3-yl-1,3-dihydropyridin-6-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site D3J "Create component" 2017-10-17 RCSB D3J "Initial release" 2018-10-24 RCSB #