data_D4J # _chem_comp.id D4J _chem_comp.name "(2S)-5-[(2-chlorophenyl)sulfanyl]-6'-(4-fluorophenoxy)-4-hydroxy-2-(thiophen-3-yl)-2,3-dihydro[2,2'-bipyridin]-6(1H)-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H18 Cl F N2 O3 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-10-17 _chem_comp.pdbx_modified_date 2018-10-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 525.014 _chem_comp.one_letter_code ? _chem_comp.three_letter_code D4J _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6BB2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal D4J C4 C1 C 0 1 Y N N 12.124 45.095 167.865 5.128 -0.588 -1.164 C4 D4J 1 D4J C14 C2 C 0 1 N N N 11.027 45.774 175.363 -1.323 0.162 1.798 C14 D4J 2 D4J C5 C3 C 0 1 Y N N 9.374 45.044 167.342 5.139 -2.874 0.399 C5 D4J 3 D4J C6 C4 C 0 1 Y N N 9.989 46.232 167.743 5.262 -1.633 0.994 C6 D4J 4 D4J C11 C5 C 0 1 Y N N 12.184 46.980 172.024 1.928 1.587 0.866 C11 D4J 5 D4J C7 C6 C 0 1 Y N N 11.366 46.270 168.017 5.251 -0.486 0.214 C7 D4J 6 D4J C9 C7 C 0 1 Y N N 12.210 47.707 169.763 4.228 1.460 0.979 C9 D4J 7 D4J C12 C8 C 0 1 N N S 11.842 45.862 173.018 0.615 0.927 0.528 C12 D4J 8 D4J C3 C9 C 0 1 Y N N 11.509 43.906 167.468 5.011 -1.830 -1.757 C3 D4J 9 D4J F1 F1 F 0 1 N N N 9.547 42.727 166.801 4.902 -4.188 -1.558 F1 D4J 10 D4J C2 C10 C 0 1 Y N N 10.136 43.880 167.201 5.016 -2.974 -0.977 C2 D4J 11 D4J O8 O1 O 0 1 N N N 11.958 47.444 168.433 5.361 0.736 0.799 O8 D4J 12 D4J N10 N1 N 0 1 Y N N 11.951 46.800 170.718 3.053 0.919 0.701 N10 D4J 13 D4J N13 N2 N 0 1 N N N 11.041 46.390 174.148 -0.286 1.012 1.678 N13 D4J 14 D4J C15 C11 C 0 1 N N N 11.876 44.602 175.614 -1.472 -0.943 0.847 C15 D4J 15 D4J S16 S1 S 0 1 N N N 11.516 43.572 177.009 -2.986 -1.839 0.758 S16 D4J 16 D4J C17 C12 C 0 1 Y N N 10.500 42.238 176.425 -4.120 -0.642 0.137 C17 D4J 17 D4J C18 C13 C 0 1 Y N N 9.811 41.413 177.354 -5.473 -0.948 0.040 C18 D4J 18 D4J C19 C14 C 0 1 Y N N 9.000 40.373 176.878 -6.359 -0.005 -0.447 C19 D4J 19 D4J C20 C15 C 0 1 Y N N 8.841 40.170 175.504 -5.900 1.240 -0.837 C20 D4J 20 D4J C21 C16 C 0 1 Y N N 9.534 40.964 174.589 -4.555 1.547 -0.742 C21 D4J 21 D4J C22 C17 C 0 1 Y N N 10.369 41.984 175.040 -3.664 0.613 -0.251 C22 D4J 22 D4J CL23 CL1 CL 0 0 N N N 9.974 41.657 179.081 -6.048 -2.511 0.530 CL23 D4J 23 D4J C24 C18 C 0 1 N N N 12.912 44.371 174.768 -0.442 -1.268 0.041 C24 D4J 24 D4J O25 O2 O 0 1 N N N 13.712 43.306 174.931 -0.582 -2.260 -0.867 O25 D4J 25 D4J C26 C19 C 0 1 N N N 13.153 45.265 173.572 0.864 -0.526 0.152 C26 D4J 26 D4J O27 O3 O 0 1 N N N 10.337 46.188 176.270 -2.131 0.308 2.696 O27 D4J 27 D4J C28 C20 C 0 1 Y N N 10.972 44.762 172.375 -0.018 1.643 -0.637 C28 D4J 28 D4J C29 C21 C 0 1 Y N N 11.434 43.576 171.925 0.210 1.293 -1.904 C29 D4J 29 D4J S30 S2 S 0 1 Y N N 10.113 42.588 171.301 -0.695 2.350 -2.980 S30 D4J 30 D4J C31 C22 C 0 1 Y N N 8.951 43.853 171.684 -1.352 3.233 -1.608 C31 D4J 31 D4J C32 C23 C 0 1 Y N N 9.589 44.895 172.230 -0.885 2.710 -0.473 C32 D4J 32 D4J C33 C24 C 0 1 Y N N 12.747 48.194 172.437 1.937 2.885 1.338 C33 D4J 33 D4J C34 C25 C 0 1 Y N N 13.034 49.180 171.485 3.149 3.486 1.647 C34 D4J 34 D4J C35 C26 C 0 1 Y N N 12.762 48.938 170.136 4.312 2.758 1.468 C35 D4J 35 D4J H1 H1 H 0 1 N N N 13.187 45.113 168.056 5.119 0.305 -1.773 H1 D4J 36 D4J H2 H2 H 0 1 N N N 8.313 45.024 167.141 5.147 -3.767 1.006 H2 D4J 37 D4J H3 H3 H 0 1 N N N 9.399 47.131 167.843 5.366 -1.557 2.066 H3 D4J 38 D4J H4 H4 H 0 1 N N N 12.095 43.004 167.367 4.915 -1.909 -2.830 H4 D4J 39 D4J H5 H5 H 0 1 N N N 10.497 47.219 174.015 -0.135 1.686 2.359 H5 D4J 40 D4J H6 H6 H 0 1 N N N 8.495 39.724 177.578 -7.410 -0.242 -0.522 H6 D4J 41 D4J H7 H7 H 0 1 N N N 8.178 39.395 175.149 -6.595 1.974 -1.218 H7 D4J 42 D4J H8 H8 H 0 1 N N N 9.423 40.787 173.529 -4.202 2.521 -1.044 H8 D4J 43 D4J H9 H9 H 0 1 N N N 10.918 42.583 174.329 -2.614 0.853 -0.177 H9 D4J 44 D4J H10 H10 H 0 1 N N N 13.455 42.833 175.714 -1.477 -2.622 -0.920 H10 D4J 45 D4J H11 H11 H 0 1 N N N 13.636 44.674 172.780 1.390 -0.567 -0.802 H11 D4J 46 D4J H12 H12 H 0 1 N N N 13.818 46.088 173.873 1.475 -0.999 0.921 H12 D4J 47 D4J H13 H13 H 0 1 N N N 12.471 43.274 171.944 0.853 0.485 -2.220 H13 D4J 48 D4J H14 H14 H 0 1 N N N 7.887 43.797 171.506 -2.034 4.068 -1.674 H14 D4J 49 D4J H15 H15 H 0 1 N N N 9.065 45.787 172.540 -1.156 3.095 0.499 H15 D4J 50 D4J H16 H16 H 0 1 N N N 12.958 48.368 173.482 1.011 3.425 1.466 H16 D4J 51 D4J H17 H17 H 0 1 N N N 13.463 50.122 171.792 3.184 4.500 2.017 H17 D4J 52 D4J H18 H18 H 0 1 N N N 12.975 49.691 169.391 5.273 3.196 1.694 H18 D4J 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal D4J F1 C2 SING N N 1 D4J C2 C5 DOUB Y N 2 D4J C2 C3 SING Y N 3 D4J C5 C6 SING Y N 4 D4J C3 C4 DOUB Y N 5 D4J C6 C7 DOUB Y N 6 D4J C4 C7 SING Y N 7 D4J C7 O8 SING N N 8 D4J O8 C9 SING N N 9 D4J C9 C35 DOUB Y N 10 D4J C9 N10 SING Y N 11 D4J C35 C34 SING Y N 12 D4J N10 C11 DOUB Y N 13 D4J S30 C31 SING Y N 14 D4J S30 C29 SING Y N 15 D4J C34 C33 DOUB Y N 16 D4J C31 C32 DOUB Y N 17 D4J C29 C28 DOUB Y N 18 D4J C11 C33 SING Y N 19 D4J C11 C12 SING N N 20 D4J C32 C28 SING Y N 21 D4J C28 C12 SING N N 22 D4J C12 C26 SING N N 23 D4J C12 N13 SING N N 24 D4J C26 C24 SING N N 25 D4J N13 C14 SING N N 26 D4J C21 C22 DOUB Y N 27 D4J C21 C20 SING Y N 28 D4J C24 O25 SING N N 29 D4J C24 C15 DOUB N N 30 D4J C22 C17 SING Y N 31 D4J C14 C15 SING N N 32 D4J C14 O27 DOUB N N 33 D4J C20 C19 DOUB Y N 34 D4J C15 S16 SING N N 35 D4J C17 S16 SING N N 36 D4J C17 C18 DOUB Y N 37 D4J C19 C18 SING Y N 38 D4J C18 CL23 SING N N 39 D4J C4 H1 SING N N 40 D4J C5 H2 SING N N 41 D4J C6 H3 SING N N 42 D4J C3 H4 SING N N 43 D4J N13 H5 SING N N 44 D4J C19 H6 SING N N 45 D4J C20 H7 SING N N 46 D4J C21 H8 SING N N 47 D4J C22 H9 SING N N 48 D4J O25 H10 SING N N 49 D4J C26 H11 SING N N 50 D4J C26 H12 SING N N 51 D4J C29 H13 SING N N 52 D4J C31 H14 SING N N 53 D4J C32 H15 SING N N 54 D4J C33 H16 SING N N 55 D4J C34 H17 SING N N 56 D4J C35 H18 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor D4J SMILES ACDLabs 12.01 "c1c(ccc(c1)F)Oc5cccc(C2(CC(=C(C(=O)N2)Sc3c(Cl)cccc3)O)c4cscc4)n5" D4J InChI InChI 1.03 "InChI=1S/C26H18ClFN2O3S2/c27-19-4-1-2-5-21(19)35-24-20(31)14-26(30-25(24)32,16-12-13-34-15-16)22-6-3-7-23(29-22)33-18-10-8-17(28)9-11-18/h1-13,15,31H,14H2,(H,30,32)/t26-/m0/s1" D4J InChIKey InChI 1.03 XFNQOQKMMIFYDK-SANMLTNESA-N D4J SMILES_CANONICAL CACTVS 3.385 "OC1=C(Sc2ccccc2Cl)C(=O)N[C@@](C1)(c3cscc3)c4cccc(Oc5ccc(F)cc5)n4" D4J SMILES CACTVS 3.385 "OC1=C(Sc2ccccc2Cl)C(=O)N[C](C1)(c3cscc3)c4cccc(Oc5ccc(F)cc5)n4" D4J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(c(c1)SC2=C(C[C@](NC2=O)(c3ccsc3)c4cccc(n4)Oc5ccc(cc5)F)O)Cl" D4J SMILES "OpenEye OEToolkits" 2.0.6 "c1ccc(c(c1)SC2=C(CC(NC2=O)(c3ccsc3)c4cccc(n4)Oc5ccc(cc5)F)O)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier D4J "SYSTEMATIC NAME" ACDLabs 12.01 "(2S)-5-[(2-chlorophenyl)sulfanyl]-6'-(4-fluorophenoxy)-4-hydroxy-2-(thiophen-3-yl)-2,3-dihydro[2,2'-bipyridin]-6(1H)-one" D4J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-5-(2-chlorophenyl)sulfanyl-2-[6-(4-fluoranylphenoxy)pyridin-2-yl]-4-oxidanyl-2-thiophen-3-yl-1,3-dihydropyridin-6-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site D4J "Create component" 2017-10-17 RCSB D4J "Initial release" 2018-10-24 RCSB #