data_D4O # _chem_comp.id D4O _chem_comp.name "(3~{S})-3-[[(1~{S},3~{S})-3-methylcyclohexyl]methyl]-6,8-bis(oxidanyl)-3,4-dihydroisochromen-1-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H22 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-06-27 _chem_comp.pdbx_modified_date 2020-04-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 290.354 _chem_comp.one_letter_code ? _chem_comp.three_letter_code D4O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6KA6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal D4O C15 C1 C 0 1 N N N 7.216 16.112 -3.216 -4.099 -1.203 -0.994 C15 D4O 1 D4O C12 C2 C 0 1 N N S 5.087 14.439 -3.558 -4.261 0.486 1.395 C12 D4O 2 D4O C13 C3 C 0 1 N N N 4.960 15.395 -2.372 -5.508 -0.155 0.784 C13 D4O 3 D4O C16 C4 C 0 1 N N N 3.950 13.417 -3.524 -4.033 1.861 0.765 C16 D4O 4 D4O C17 C5 C 0 1 N N N 6.427 13.729 -3.534 -3.046 -0.405 1.127 C17 D4O 5 D4O C10 C6 C 0 1 N N N 8.168 14.773 -4.973 -1.637 -1.453 -0.650 C10 D4O 6 D4O C1 C7 C 0 1 Y N N 10.514 10.485 -7.757 3.356 1.156 -0.029 C1 D4O 7 D4O C11 C8 C 0 1 N N S 7.618 14.683 -3.563 -2.852 -0.562 -0.383 C11 D4O 8 D4O C14 C9 C 0 1 N N N 6.238 16.166 -2.062 -5.314 -0.312 -0.726 C14 D4O 9 D4O C2 C10 C 0 1 Y N N 10.417 10.428 -9.140 4.501 0.454 0.309 C2 D4O 10 D4O C3 C11 C 0 1 Y N N 9.856 11.486 -9.839 4.452 -0.926 0.443 C3 D4O 11 D4O C4 C12 C 0 1 Y N N 9.392 12.614 -9.170 3.260 -1.612 0.237 C4 D4O 12 D4O C5 C13 C 0 1 Y N N 9.495 12.656 -7.787 2.114 -0.927 -0.100 C5 D4O 13 D4O C6 C14 C 0 1 N N N 9.004 13.850 -7.023 0.830 -1.681 -0.330 C6 D4O 14 D4O C7 C15 C 0 1 N N S 8.531 13.451 -5.626 -0.369 -0.745 -0.169 C7 D4O 15 D4O C8 C16 C 0 1 N N N 10.153 11.661 -5.598 0.921 1.197 -0.576 C8 D4O 16 D4O C9 C17 C 0 1 Y N N 10.055 11.601 -7.089 2.155 0.464 -0.233 C9 D4O 17 D4O O1 O1 O 0 1 N N N 11.061 9.448 -7.055 3.397 2.506 -0.158 O1 D4O 18 D4O O2 O2 O 0 1 N N N 9.775 11.404 -11.195 5.576 -1.611 0.775 O2 D4O 19 D4O O3 O3 O 0 1 N N N 9.567 12.786 -4.883 -0.151 0.457 -0.963 O3 D4O 20 D4O O4 O4 O 0 1 N N N 10.723 10.761 -4.982 0.868 2.410 -0.525 O4 D4O 21 D4O H1 H1 H 0 1 N N N 8.119 16.678 -2.942 -3.961 -1.314 -2.069 H1 D4O 22 D4O H2 H2 H 0 1 N N N 6.748 16.573 -4.099 -4.261 -2.183 -0.545 H2 D4O 23 D4O H3 H3 H 0 1 N N N 5.010 15.020 -4.489 -4.399 0.598 2.470 H3 D4O 24 D4O H4 H4 H 0 1 N N N 4.163 16.120 -2.595 -5.671 -1.135 1.233 H4 D4O 25 D4O H5 H5 H 0 1 N N N 4.684 14.809 -1.483 -6.374 0.480 0.974 H5 D4O 26 D4O H6 H6 H 0 1 N N N 2.984 13.942 -3.542 -3.894 1.750 -0.311 H6 D4O 27 D4O H7 H7 H 0 1 N N N 4.024 12.757 -4.401 -4.898 2.496 0.955 H7 D4O 28 D4O H8 H8 H 0 1 N N N 4.024 12.817 -2.605 -3.144 2.318 1.200 H8 D4O 29 D4O H9 H9 H 0 1 N N N 6.488 13.069 -4.412 -2.158 0.051 1.562 H9 D4O 30 D4O H10 H10 H 0 1 N N N 6.486 13.126 -2.616 -3.208 -1.385 1.576 H10 D4O 31 D4O H11 H11 H 0 1 N N N 9.075 15.395 -4.943 -1.753 -2.395 -0.115 H11 D4O 32 D4O H12 H12 H 0 1 N N N 7.409 15.262 -5.601 -1.560 -1.650 -1.720 H12 D4O 33 D4O H13 H13 H 0 1 N N N 8.399 14.332 -2.872 -2.690 0.418 -0.832 H13 D4O 34 D4O H14 H14 H 0 1 N N N 6.712 15.728 -1.172 -5.152 0.668 -1.175 H14 D4O 35 D4O H15 H15 H 0 1 N N N 5.981 17.216 -1.861 -6.203 -0.768 -1.161 H15 D4O 36 D4O H16 H16 H 0 1 N N N 10.778 9.560 -9.672 5.431 0.980 0.468 H16 D4O 37 D4O H17 H17 H 0 1 N N N 8.961 13.440 -9.716 3.232 -2.687 0.343 H17 D4O 38 D4O H18 H18 H 0 1 N N N 9.822 14.579 -6.931 0.831 -2.097 -1.337 H18 D4O 39 D4O H19 H19 H 0 1 N N N 8.166 14.307 -7.570 0.754 -2.493 0.394 H19 D4O 40 D4O H20 H20 H 0 1 N N N 7.636 12.817 -5.706 -0.481 -0.474 0.881 H20 D4O 41 D4O H21 H21 H 0 1 N N N 11.075 9.664 -6.130 3.213 2.985 0.662 H21 D4O 42 D4O H22 H22 H 0 1 N N N 10.134 10.574 -11.485 6.100 -1.899 0.015 H22 D4O 43 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal D4O O2 C3 SING N N 1 D4O C3 C4 DOUB Y N 2 D4O C3 C2 SING Y N 3 D4O C4 C5 SING Y N 4 D4O C2 C1 DOUB Y N 5 D4O C5 C9 DOUB Y N 6 D4O C5 C6 SING N N 7 D4O C1 C9 SING Y N 8 D4O C1 O1 SING N N 9 D4O C9 C8 SING N N 10 D4O C6 C7 SING N N 11 D4O C7 C10 SING N N 12 D4O C7 O3 SING N N 13 D4O C8 O4 DOUB N N 14 D4O C8 O3 SING N N 15 D4O C10 C11 SING N N 16 D4O C11 C17 SING N N 17 D4O C11 C15 SING N N 18 D4O C12 C17 SING N N 19 D4O C12 C16 SING N N 20 D4O C12 C13 SING N N 21 D4O C15 C14 SING N N 22 D4O C13 C14 SING N N 23 D4O C15 H1 SING N N 24 D4O C15 H2 SING N N 25 D4O C12 H3 SING N N 26 D4O C13 H4 SING N N 27 D4O C13 H5 SING N N 28 D4O C16 H6 SING N N 29 D4O C16 H7 SING N N 30 D4O C16 H8 SING N N 31 D4O C17 H9 SING N N 32 D4O C17 H10 SING N N 33 D4O C10 H11 SING N N 34 D4O C10 H12 SING N N 35 D4O C11 H13 SING N N 36 D4O C14 H14 SING N N 37 D4O C14 H15 SING N N 38 D4O C2 H16 SING N N 39 D4O C4 H17 SING N N 40 D4O C6 H18 SING N N 41 D4O C6 H19 SING N N 42 D4O C7 H20 SING N N 43 D4O O1 H21 SING N N 44 D4O O2 H22 SING N N 45 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor D4O InChI InChI 1.03 "InChI=1S/C17H22O4/c1-10-3-2-4-11(5-10)6-14-8-12-7-13(18)9-15(19)16(12)17(20)21-14/h7,9-11,14,18-19H,2-6,8H2,1H3/t10-,11-,14-/m0/s1" D4O InChIKey InChI 1.03 ZGIJWPKFHHUCIH-MJVIPROJSA-N D4O SMILES_CANONICAL CACTVS 3.385 "C[C@H]1CCC[C@@H](C1)C[C@H]2Cc3cc(O)cc(O)c3C(=O)O2" D4O SMILES CACTVS 3.385 "C[CH]1CCC[CH](C1)C[CH]2Cc3cc(O)cc(O)c3C(=O)O2" D4O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1CCC[C@@H](C1)C[C@H]2Cc3cc(cc(c3C(=O)O2)O)O" D4O SMILES "OpenEye OEToolkits" 2.0.7 "CC1CCCC(C1)CC2Cc3cc(cc(c3C(=O)O2)O)O" # _pdbx_chem_comp_identifier.comp_id D4O _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S})-3-[[(1~{S},3~{S})-3-methylcyclohexyl]methyl]-6,8-bis(oxidanyl)-3,4-dihydroisochromen-1-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site D4O "Create component" 2019-06-27 PDBJ D4O "Initial release" 2020-04-08 RCSB ##