data_D5B # _chem_comp.id D5B _chem_comp.name "[8-(azaniumylmethyl)anthracen-1-yl]methylazanium" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H18 N2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 2 _chem_comp.pdbx_initial_date 2017-12-21 _chem_comp.pdbx_modified_date 2019-04-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 238.328 _chem_comp.one_letter_code ? _chem_comp.three_letter_code D5B _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6FC9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal D5B C1 C1 C 0 1 Y N N 20.271 24.415 24.074 3.587 -0.120 -0.275 C1 D5B 1 D5B C2 C2 C 0 1 Y N N 18.912 24.090 23.956 3.588 -1.515 -0.274 C2 D5B 2 D5B C3 C3 C 0 1 Y N N 18.509 22.746 23.956 2.437 -2.229 -0.186 C3 D5B 3 D5B C5 C4 C 0 1 Y N N 20.848 22.046 24.139 1.201 -0.085 -0.098 C5 D5B 4 D5B C6 C5 C 0 1 Y N N 21.242 23.405 24.159 2.435 0.594 -0.188 C6 D5B 5 D5B C7 C6 C 0 1 Y N N 19.056 20.385 24.112 0.002 -2.253 0.001 C7 D5B 6 D5B C8 C7 C 0 1 Y N N 20.004 19.356 24.249 -1.200 -1.553 0.092 C8 D5B 7 D5B C9 C8 C 0 1 Y N N 21.385 19.660 24.304 -1.201 -0.086 0.091 C9 D5B 8 D5B C11 C9 C 0 1 Y N N 19.568 18.021 24.332 -2.434 -2.232 0.188 C11 D5B 9 D5B C12 C10 C 0 1 Y N N 20.503 16.991 24.523 -3.585 -1.518 0.276 C12 D5B 10 D5B C13 C11 C 0 1 Y N N 21.871 17.291 24.606 -3.586 -0.123 0.275 C13 D5B 11 D5B C14 C12 C 0 1 Y N N 22.323 18.613 24.457 -2.435 0.591 0.186 C14 D5B 12 D5B N1 N1 N 1 1 N N N 22.996 24.278 25.654 2.348 2.591 1.193 N1 D5B 13 D5B N2 N2 N 1 1 N N N 24.330 18.627 23.072 -2.354 2.593 -1.189 N2 D5B 14 D5B C4 C13 C 0 1 Y N N 19.473 21.725 24.064 1.202 -1.552 -0.092 C4 D5B 15 D5B C10 C14 C 0 1 Y N N 21.796 21.006 24.223 -0.001 0.616 -0.008 C10 D5B 16 D5B C15 C15 C 0 1 N N N 22.685 23.841 24.284 2.474 2.100 -0.185 C15 D5B 17 D5B C16 C16 C 0 1 N N N 23.816 18.842 24.440 -2.476 2.098 0.189 C16 D5B 18 D5B H1 H1 H 0 1 N N N 20.573 25.452 24.100 4.528 0.407 -0.343 H1 D5B 19 D5B H2 H2 H 0 1 N N N 18.175 24.874 23.865 4.528 -2.040 -0.346 H2 D5B 20 D5B H3 H3 H 0 1 N N N 17.462 22.495 23.873 2.466 -3.309 -0.188 H3 D5B 21 D5B H7 H4 H 0 1 N N N 18.005 20.145 24.044 0.002 -3.333 0.002 H7 D5B 22 D5B H11 H5 H 0 1 N N N 18.517 17.789 24.249 -2.461 -3.311 0.191 H11 D5B 23 D5B H12 H6 H 0 1 N N N 20.169 15.967 24.606 -4.526 -2.045 0.349 H12 D5B 24 D5B H13 H7 H 0 1 N N N 22.583 16.499 24.786 -4.527 0.402 0.347 H13 D5B 25 D5B HN11 H8 H 0 0 N N N 23.954 24.559 25.705 3.111 2.234 1.749 HN11 D5B 26 D5B HN12 H9 H 0 0 N N N 22.409 25.049 25.899 2.374 3.600 1.195 HN12 D5B 27 D5B HN13 H10 H 0 0 N N N 22.836 23.522 26.289 1.472 2.277 1.583 HN13 D5B 28 D5B HN23 H11 H 0 0 N N N 25.318 18.778 23.059 -2.381 3.602 -1.187 HN23 D5B 29 D5B HN22 H12 H 0 0 N N N 24.133 17.690 22.785 -1.479 2.281 -1.583 HN22 D5B 30 D5B HN21 H13 H 0 0 N N N 23.887 19.268 22.445 -3.118 2.237 -1.743 HN21 D5B 31 D5B H10 H14 H 0 1 N N N 22.850 21.243 24.225 -0.001 1.696 -0.004 H10 D5B 32 D5B H151 H15 H 0 0 N N N 23.338 22.996 24.021 3.421 2.440 -0.606 H151 D5B 33 D5B H152 H16 H 0 0 N N N 22.868 24.676 23.592 1.650 2.486 -0.786 H152 D5B 34 D5B H161 H17 H 0 0 N N N 24.303 18.137 25.130 -3.421 2.435 0.614 H161 D5B 35 D5B H162 H18 H 0 0 N N N 24.033 19.873 24.756 -1.650 2.482 0.787 H162 D5B 36 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal D5B N2 C16 SING N N 1 D5B C2 C3 DOUB Y N 2 D5B C2 C1 SING Y N 3 D5B C3 C4 SING Y N 4 D5B C4 C7 DOUB Y N 5 D5B C4 C5 SING Y N 6 D5B C1 C6 DOUB Y N 7 D5B C7 C8 SING Y N 8 D5B C5 C6 SING Y N 9 D5B C5 C10 DOUB Y N 10 D5B C6 C15 SING N N 11 D5B C10 C9 SING Y N 12 D5B C8 C9 DOUB Y N 13 D5B C8 C11 SING Y N 14 D5B C15 N1 SING N N 15 D5B C9 C14 SING Y N 16 D5B C11 C12 DOUB Y N 17 D5B C16 C14 SING N N 18 D5B C14 C13 DOUB Y N 19 D5B C12 C13 SING Y N 20 D5B C1 H1 SING N N 21 D5B C2 H2 SING N N 22 D5B C3 H3 SING N N 23 D5B C7 H7 SING N N 24 D5B C11 H11 SING N N 25 D5B C12 H12 SING N N 26 D5B C13 H13 SING N N 27 D5B N1 HN11 SING N N 28 D5B N1 HN12 SING N N 29 D5B N1 HN13 SING N N 30 D5B N2 HN23 SING N N 31 D5B N2 HN22 SING N N 32 D5B N2 HN21 SING N N 33 D5B C10 H10 SING N N 34 D5B C15 H151 SING N N 35 D5B C15 H152 SING N N 36 D5B C16 H161 SING N N 37 D5B C16 H162 SING N N 38 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor D5B InChI InChI 1.03 "InChI=1S/C16H16N2/c17-9-13-5-1-3-11-7-12-4-2-6-14(10-18)16(12)8-15(11)13/h1-8H,9-10,17-18H2/p+2" D5B InChIKey InChI 1.03 NTFMELQYTBAEQP-UHFFFAOYSA-P D5B SMILES_CANONICAL CACTVS 3.385 "[NH3+]Cc1cccc2cc3cccc(C[NH3+])c3cc12" D5B SMILES CACTVS 3.385 "[NH3+]Cc1cccc2cc3cccc(C[NH3+])c3cc12" D5B SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1cc2cc3cccc(c3cc2c(c1)C[NH3+])C[NH3+]" D5B SMILES "OpenEye OEToolkits" 2.0.6 "c1cc2cc3cccc(c3cc2c(c1)C[NH3+])C[NH3+]" # _pdbx_chem_comp_identifier.comp_id D5B _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "[8-(azaniumylmethyl)anthracen-1-yl]methylazanium" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site D5B "Create component" 2017-12-21 EBI D5B "Other modification" 2018-01-26 EBI D5B "Other modification" 2019-01-28 EBI D5B "Initial release" 2019-04-10 RCSB ##