data_D5G # _chem_comp.id D5G _chem_comp.name "(2S)-4-METHYL-2-(3-PHENYLTHIOUREIDO)-N-((3S)-TETRAHYDRO-2-HYDROXY-3-FURANYL)PENTANAMIDE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H25 N3 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms SNJ-1715 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2006-03-08 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 351.464 _chem_comp.one_letter_code ? _chem_comp.three_letter_code D5G _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2G8E _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal D5G CAK CAK C 0 1 Y N N 63.166 1.614 27.507 4.690 0.895 -0.966 CAK D5G 1 D5G CAI CAI C 0 1 Y N N 63.103 0.607 26.540 5.940 0.832 -1.552 CAI D5G 2 D5G CAH CAH C 0 1 Y N N 64.139 0.417 25.603 7.055 0.567 -0.777 CAH D5G 3 D5G CAJ CAJ C 0 1 Y N N 65.277 1.261 25.618 6.922 0.365 0.584 CAJ D5G 4 D5G CAL CAL C 0 1 Y N N 65.343 2.272 26.589 5.677 0.433 1.176 CAL D5G 5 D5G CAV CAV C 0 1 Y N N 64.292 2.448 27.519 4.554 0.693 0.401 CAV D5G 6 D5G NAP NAP N 0 1 N N N 64.361 3.434 28.418 3.290 0.757 0.997 NAP D5G 7 D5G CAU CAU C 0 1 N N N 64.424 4.747 28.067 2.223 0.219 0.373 CAU D5G 8 D5G SAG SAG S 0 1 N N N 64.230 5.884 29.275 2.436 -0.666 -1.078 SAG D5G 9 D5G N N N 0 1 N N N 64.629 5.206 26.817 0.989 0.377 0.891 N D5G 10 D5G CA CA C 0 1 N N S 64.752 6.634 26.485 -0.160 -0.275 0.258 CA D5G 11 D5G CB CB C 0 1 N N N 65.096 6.798 24.989 -0.278 -1.711 0.771 CB D5G 12 D5G CG CG C 0 1 N N N 66.338 6.042 24.565 -1.471 -2.396 0.100 CG D5G 13 D5G CD2 CD2 C 0 1 N N N 66.780 6.294 23.095 -1.200 -2.541 -1.398 CD2 D5G 14 D5G CD1 CD1 C 0 1 N N N 67.419 6.319 25.568 -1.678 -3.780 0.718 CD1 D5G 15 D5G C C C 0 1 N N N 63.406 7.382 26.625 -1.417 0.484 0.596 C D5G 16 D5G O O O 0 1 N N N 62.308 6.844 26.396 -1.453 1.189 1.583 O D5G 17 D5G NAQ NAQ N 0 1 N N N 63.545 8.667 26.956 -2.501 0.381 -0.198 NAQ D5G 18 D5G CAZ CAZ C 0 1 N N S 62.381 9.546 27.046 -3.735 1.089 0.151 CAZ D5G 19 D5G CAX CAX C 0 1 N N N 62.572 10.570 25.934 -4.633 0.217 1.054 CAX D5G 20 D5G OAF OAF O 0 1 N N N 61.590 11.555 26.098 -5.987 0.398 0.623 OAF D5G 21 D5G CAN CAN C 0 1 N N N 62.162 10.142 28.477 -4.626 1.298 -1.104 CAN D5G 22 D5G CAM CAM C 0 1 N N S 61.659 9.048 29.423 -6.036 1.344 -0.456 CAM D5G 23 D5G OAE OAE O 0 1 N N N 60.687 9.565 30.341 -7.034 0.963 -1.405 OAE D5G 24 D5G HAK HAK H 0 1 N N N 62.370 1.746 28.225 3.820 1.101 -1.572 HAK D5G 25 D5G HAI HAI H 0 1 N N N 62.240 -0.041 26.510 6.046 0.988 -2.615 HAI D5G 26 D5G HAH HAH H 0 1 N N N 64.065 -0.374 24.872 8.030 0.518 -1.237 HAH D5G 27 D5G HAJ HAJ H 0 1 N N N 66.073 1.130 24.900 7.795 0.158 1.186 HAJ D5G 28 D5G HAL HAL H 0 1 N N N 66.205 2.922 26.627 5.574 0.275 2.240 HAL D5G 29 D5G HAP HAP H 0 1 N N N 64.367 3.197 29.389 3.181 1.188 1.859 HAP D5G 30 D5G HN HN H 0 1 N N N 64.701 4.540 26.075 0.862 0.922 1.683 HN D5G 31 D5G HA HA H 0 1 N N N 65.517 7.032 27.168 -0.022 -0.285 -0.823 HA D5G 32 D5G HB1 1HB H 0 1 N N N 65.292 7.867 24.816 -0.425 -1.700 1.851 HB1 D5G 33 D5G HB2 2HB H 0 1 N N N 64.248 6.420 24.400 0.635 -2.258 0.534 HB2 D5G 34 D5G HG HG H 0 1 N N N 66.103 4.967 24.561 -2.367 -1.794 0.251 HG D5G 35 D5G HD21 1HD2 H 0 0 N N N 67.422 5.467 22.759 -1.153 -1.553 -1.856 HD21 D5G 36 D5G HD22 2HD2 H 0 0 N N N 67.339 7.240 23.037 -0.250 -3.056 -1.548 HD22 D5G 37 D5G HD23 3HD2 H 0 0 N N N 65.891 6.353 22.449 -2.002 -3.117 -1.859 HD23 D5G 38 D5G HD11 1HD1 H 0 0 N N N 67.452 5.504 26.306 -0.781 -4.383 0.567 HD11 D5G 39 D5G HD12 2HD1 H 0 0 N N N 67.209 7.269 26.080 -1.871 -3.677 1.785 HD12 D5G 40 D5G HD13 3HD1 H 0 0 N N N 68.389 6.387 25.053 -2.527 -4.268 0.240 HD13 D5G 41 D5G HAQ HAQ H 0 1 N N N 64.456 9.033 27.145 -2.464 -0.163 -1.000 HAQ D5G 42 D5G HAZ HAZ H 0 1 N N N 61.437 9.001 26.898 -3.511 2.042 0.630 HAZ D5G 43 D5G HAX1 1HAX H 0 0 N N N 62.480 10.092 24.948 -4.350 -0.831 0.956 HAX1 D5G 44 D5G HAX2 2HAX H 0 0 N N N 63.574 11.019 26.000 -4.530 0.533 2.093 HAX2 D5G 45 D5G HAN1 1HAN H 0 0 N N N 61.416 10.948 28.425 -4.393 2.238 -1.605 HAN1 D5G 46 D5G HAN2 2HAN H 0 0 N N N 63.114 10.542 28.855 -4.536 0.456 -1.790 HAN2 D5G 47 D5G HAM HAM H 0 1 N N N 61.873 8.069 29.876 -6.240 2.344 -0.074 HAM D5G 48 D5G HAE HAE H 0 1 N N N 61.087 9.679 31.195 -7.881 0.970 -0.938 HAE D5G 49 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal D5G CAK CAI SING Y N 1 D5G CAK CAV DOUB Y N 2 D5G CAK HAK SING N N 3 D5G CAI CAH DOUB Y N 4 D5G CAI HAI SING N N 5 D5G CAH CAJ SING Y N 6 D5G CAH HAH SING N N 7 D5G CAJ CAL DOUB Y N 8 D5G CAJ HAJ SING N N 9 D5G CAL CAV SING Y N 10 D5G CAL HAL SING N N 11 D5G CAV NAP SING N N 12 D5G NAP CAU SING N N 13 D5G NAP HAP SING N N 14 D5G CAU SAG DOUB N N 15 D5G CAU N SING N N 16 D5G N CA SING N N 17 D5G N HN SING N N 18 D5G CA CB SING N N 19 D5G CA C SING N N 20 D5G CA HA SING N N 21 D5G CB CG SING N N 22 D5G CB HB1 SING N N 23 D5G CB HB2 SING N N 24 D5G CG CD2 SING N N 25 D5G CG CD1 SING N N 26 D5G CG HG SING N N 27 D5G CD2 HD21 SING N N 28 D5G CD2 HD22 SING N N 29 D5G CD2 HD23 SING N N 30 D5G CD1 HD11 SING N N 31 D5G CD1 HD12 SING N N 32 D5G CD1 HD13 SING N N 33 D5G C O DOUB N N 34 D5G C NAQ SING N N 35 D5G NAQ CAZ SING N N 36 D5G NAQ HAQ SING N N 37 D5G CAZ CAX SING N N 38 D5G CAZ CAN SING N N 39 D5G CAZ HAZ SING N N 40 D5G CAX OAF SING N N 41 D5G CAX HAX1 SING N N 42 D5G CAX HAX2 SING N N 43 D5G OAF CAM SING N N 44 D5G CAN CAM SING N N 45 D5G CAN HAN1 SING N N 46 D5G CAN HAN2 SING N N 47 D5G CAM OAE SING N N 48 D5G CAM HAM SING N N 49 D5G OAE HAE SING N N 50 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor D5G SMILES ACDLabs 10.04 "O=C(NC1COC(O)C1)C(NC(=S)Nc2ccccc2)CC(C)C" D5G SMILES_CANONICAL CACTVS 3.341 "CC(C)C[C@H](NC(=S)Nc1ccccc1)C(=O)N[C@@H]2CO[C@H](O)C2" D5G SMILES CACTVS 3.341 "CC(C)C[CH](NC(=S)Nc1ccccc1)C(=O)N[CH]2CO[CH](O)C2" D5G SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(C)C[C@@H](C(=O)N[C@H]1C[C@H](OC1)O)NC(=S)Nc2ccccc2" D5G SMILES "OpenEye OEToolkits" 1.5.0 "CC(C)CC(C(=O)NC1CC(OC1)O)NC(=S)Nc2ccccc2" D5G InChI InChI 1.03 "InChI=1S/C17H25N3O3S/c1-11(2)8-14(16(22)18-13-9-15(21)23-10-13)20-17(24)19-12-6-4-3-5-7-12/h3-7,11,13-15,21H,8-10H2,1-2H3,(H,18,22)(H2,19,20,24)/t13-,14-,15-/m0/s1" D5G InChIKey InChI 1.03 DBPWWBMTZYJGGV-KKUMJFAQSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier D5G "SYSTEMATIC NAME" ACDLabs 10.04 "N-[(3S,5S)-5-hydroxytetrahydrofuran-3-yl]-N~2~-(phenylcarbamothioyl)-L-leucinamide" D5G "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-N-[(3S,5S)-5-hydroxyoxolan-3-yl]-4-methyl-2-(phenylcarbamothioylamino)pentanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site D5G "Create component" 2006-03-08 RCSB D5G "Modify descriptor" 2011-06-04 RCSB D5G "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id D5G _pdbx_chem_comp_synonyms.name SNJ-1715 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##