data_D5O # _chem_comp.id D5O _chem_comp.name "3-(cyclohexylmethyl)-6,8-bis(oxidanyl)isochromen-1-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H18 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-07-03 _chem_comp.pdbx_modified_date 2020-04-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 274.312 _chem_comp.one_letter_code ? _chem_comp.three_letter_code D5O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6KCT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal D5O C1 C1 C 0 1 Y N N 10.283 10.364 -7.620 3.197 0.827 0.447 C1 D5O 1 D5O C10 C2 C 0 1 N N N 8.255 15.043 -5.125 -2.034 0.069 -1.607 C10 D5O 2 D5O C11 C3 C 0 1 N N N 7.345 14.692 -3.957 -2.973 0.162 -0.402 C11 D5O 3 D5O C12 C4 C 0 1 N N N 4.975 14.085 -3.355 -3.650 -0.922 1.744 C12 D5O 4 D5O C13 C5 C 0 1 N N N 4.897 15.297 -2.436 -5.102 -0.964 1.265 C13 D5O 5 D5O C14 C6 C 0 1 N N N 6.277 15.644 -1.892 -5.363 0.214 0.324 C14 D5O 6 D5O C15 C7 C 0 1 N N N 7.251 15.900 -3.034 -4.425 0.120 -0.882 C15 D5O 7 D5O C17 C8 C 0 1 N N N 5.962 14.336 -4.490 -2.712 -1.016 0.539 C17 D5O 8 D5O C2 C9 C 0 1 Y N N 10.233 10.246 -9.002 4.091 -0.230 0.491 C2 D5O 9 D5O C3 C10 C 0 1 Y N N 9.692 11.268 -9.771 3.703 -1.503 0.083 C3 D5O 10 D5O C4 C11 C 0 1 Y N N 9.196 12.411 -9.156 2.416 -1.742 -0.375 C4 D5O 11 D5O C5 C12 C 0 1 Y N N 9.247 12.525 -7.774 1.505 -0.697 -0.426 C5 D5O 12 D5O C6 C13 C 0 1 N N N 8.759 13.661 -7.146 0.123 -0.863 -0.892 C6 D5O 13 D5O C7 C14 C 0 1 N N N 8.796 13.786 -5.761 -0.609 0.233 -1.148 C7 D5O 14 D5O C8 C15 C 0 1 N N N 9.825 11.655 -5.533 0.886 1.659 -0.102 C8 D5O 15 D5O C9 C16 C 0 1 Y N N 9.786 11.504 -7.009 1.899 0.603 -0.014 C9 D5O 16 D5O O1 O1 O 0 1 N N N 10.810 9.362 -6.867 3.578 2.064 0.853 O1 D5O 17 D5O O2 O2 O 0 1 N N N 9.651 11.145 -11.126 4.597 -2.523 0.132 O2 D5O 18 D5O O3 O3 O 0 1 N N N 9.326 12.797 -4.971 -0.107 1.476 -1.008 O3 D5O 19 D5O O4 O4 O 0 1 N N N 10.305 10.752 -4.816 0.936 2.654 0.597 O4 D5O 20 D5O H1 H1 H 0 1 N N N 9.093 15.656 -4.761 -2.153 -0.904 -2.085 H1 D5O 21 D5O H2 H2 H 0 1 N N N 7.683 15.611 -5.873 -2.280 0.856 -2.320 H2 D5O 22 D5O H3 H3 H 0 1 N N N 7.762 13.836 -3.406 -2.792 1.097 0.128 H3 D5O 23 D5O H4 H4 H 0 1 N N N 3.979 13.888 -3.779 -3.469 0.013 2.274 H4 D5O 24 D5O H5 H5 H 0 1 N N N 5.306 13.211 -2.774 -3.464 -1.762 2.415 H5 D5O 25 D5O H6 H6 H 0 1 N N N 4.504 16.155 -3.001 -5.283 -1.900 0.735 H6 D5O 26 D5O H7 H7 H 0 1 N N N 4.223 15.072 -1.596 -5.771 -0.898 2.123 H7 D5O 27 D5O H8 H8 H 0 1 N N N 6.647 14.807 -1.282 -6.397 0.184 -0.018 H8 D5O 28 D5O H9 H9 H 0 1 N N N 6.204 16.548 -1.269 -5.182 1.149 0.853 H9 D5O 29 D5O H10 H10 H 0 1 N N N 8.246 16.111 -2.616 -4.610 0.959 -1.552 H10 D5O 30 D5O H11 H11 H 0 1 N N N 6.905 16.769 -3.613 -4.606 -0.815 -1.411 H11 D5O 31 D5O H12 H12 H 0 1 N N N 5.592 15.167 -5.108 -2.893 -1.951 0.009 H12 D5O 32 D5O H13 H13 H 0 1 N N N 6.039 13.427 -5.105 -1.678 -0.986 0.881 H13 D5O 33 D5O H14 H14 H 0 1 N N N 10.616 9.357 -9.481 5.097 -0.066 0.846 H14 D5O 34 D5O H15 H15 H 0 1 N N N 8.773 13.207 -9.751 2.125 -2.733 -0.690 H15 D5O 35 D5O H16 H16 H 0 1 N N N 8.344 14.461 -7.741 -0.298 -1.849 -1.026 H16 D5O 36 D5O H17 H17 H 0 1 N N N 10.766 9.599 -5.948 3.429 2.233 1.793 H17 D5O 37 D5O H18 H18 H 0 1 N N N 10.027 10.311 -11.380 5.115 -2.633 -0.677 H18 D5O 38 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal D5O O2 C3 SING N N 1 D5O C3 C4 SING Y N 2 D5O C3 C2 DOUB Y N 3 D5O C4 C5 DOUB Y N 4 D5O C2 C1 SING Y N 5 D5O C5 C6 SING N N 6 D5O C5 C9 SING Y N 7 D5O C1 C9 DOUB Y N 8 D5O C1 O1 SING N N 9 D5O C6 C7 DOUB N N 10 D5O C9 C8 SING N N 11 D5O C7 C10 SING N N 12 D5O C7 O3 SING N N 13 D5O C8 O3 SING N N 14 D5O C8 O4 DOUB N N 15 D5O C10 C11 SING N N 16 D5O C17 C11 SING N N 17 D5O C17 C12 SING N N 18 D5O C11 C15 SING N N 19 D5O C12 C13 SING N N 20 D5O C15 C14 SING N N 21 D5O C13 C14 SING N N 22 D5O C10 H1 SING N N 23 D5O C10 H2 SING N N 24 D5O C11 H3 SING N N 25 D5O C12 H4 SING N N 26 D5O C12 H5 SING N N 27 D5O C13 H6 SING N N 28 D5O C13 H7 SING N N 29 D5O C14 H8 SING N N 30 D5O C14 H9 SING N N 31 D5O C15 H10 SING N N 32 D5O C15 H11 SING N N 33 D5O C17 H12 SING N N 34 D5O C17 H13 SING N N 35 D5O C2 H14 SING N N 36 D5O C4 H15 SING N N 37 D5O C6 H16 SING N N 38 D5O O1 H17 SING N N 39 D5O O2 H18 SING N N 40 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor D5O InChI InChI 1.03 "InChI=1S/C16H18O4/c17-12-7-11-8-13(6-10-4-2-1-3-5-10)20-16(19)15(11)14(18)9-12/h7-10,17-18H,1-6H2" D5O InChIKey InChI 1.03 ZYQPLLMXINVPHW-UHFFFAOYSA-N D5O SMILES_CANONICAL CACTVS 3.385 "Oc1cc(O)c2C(=O)OC(=Cc2c1)CC3CCCCC3" D5O SMILES CACTVS 3.385 "Oc1cc(O)c2C(=O)OC(=Cc2c1)CC3CCCCC3" D5O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c(cc(c2c1C=C(OC2=O)CC3CCCCC3)O)O" D5O SMILES "OpenEye OEToolkits" 2.0.7 "c1c(cc(c2c1C=C(OC2=O)CC3CCCCC3)O)O" # _pdbx_chem_comp_identifier.comp_id D5O _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "3-(cyclohexylmethyl)-6,8-bis(oxidanyl)isochromen-1-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site D5O "Create component" 2019-07-03 PDBJ D5O "Initial release" 2020-04-08 RCSB ##