data_DC9 # _chem_comp.id DC9 _chem_comp.name "bis-molybdopterin guanine dinucleotide oxo tungsten" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C40 H48 N20 O27 P4 S4 W" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date 2026-04-20 _chem_comp.pdbx_modified_date 2026-09-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 1676.922 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details MetalCoord _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1E18 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y _chem_comp.pdbx_comp_type "metal-containing ligand" # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_component_id DC9 PB P1 P 0 1 N N N N N N 3.616 48.685 30.713 -8.600 -0.617 1.047 PB DC9 1 1 non-polymer 2 DC9 O1B O1 O 0 1 N N N N N N 4.293 50.092 31.405 -7.873 -1.042 2.263 O1B DC9 2 1 non-polymer 2 DC9 O2B O2 O 0 1 N N N N N N 2.637 48.871 29.369 -8.549 -1.654 -0.071 O2B DC9 3 1 non-polymer 2 DC9 O3B O3 O 0 1 N N N N N N 2.734 48.105 31.981 -7.852 0.662 0.424 O3B DC9 4 1 non-polymer 2 DC9 O3A O4 O 0 1 N N N N N N 1.230 46.934 33.696 -5.521 1.615 -0.212 O3A DC9 5 1 non-polymer 2 DC9 PA P2 P 0 1 N N N N N N 2.246 46.560 32.333 -6.793 0.838 -0.774 PA DC9 6 1 non-polymer 2 DC9 O2A O6 O 0 1 N N N N N N 1.493 45.944 31.006 -6.489 -0.487 -1.356 O2A DC9 7 1 non-polymer 2 DC9 O1A O5 O 0 1 N N N N N N 3.616 45.764 32.919 -7.486 1.777 -1.749 O1A DC9 8 1 non-polymer 2 DC9 "O5'" O7 O 0 1 N N N N N N 4.861 47.514 30.475 -10.137 -0.252 1.304 "O5'" DC9 9 1 non-polymer 2 DC9 "C5'" C1 C 0 1 N N N N N N 5.017 47.128 29.137 -11.150 -1.287 1.482 "C5'" DC9 10 1 non-polymer 2 DC9 "C4'" C2 C 0 1 N N R N N N 6.552 47.012 28.912 -12.304 -0.780 2.326 "C4'" DC9 11 1 non-polymer 2 DC9 "O4'" O8 O 0 1 N N N N N N 6.787 46.313 27.710 -13.045 0.217 1.587 "O4'" DC9 12 1 non-polymer 2 DC9 "C3'" C3 C 0 1 N N S N N N 7.178 48.398 28.762 -13.353 -1.822 2.751 "C3'" DC9 13 1 non-polymer 2 DC9 "O3'" O9 O 0 1 N N N N N N 8.306 48.563 29.604 -13.782 -1.548 4.082 "O3'" DC9 14 1 non-polymer 2 DC9 "C2'" C4 C 0 1 N N R N N N 7.578 48.403 27.293 -14.470 -1.670 1.704 "C2'" DC9 15 1 non-polymer 2 DC9 "O2'" O10 O 0 1 N N N N N N 8.725 49.151 27.051 -15.743 -2.006 2.221 "O2'" DC9 16 1 non-polymer 2 DC9 "C1'" C5 C 0 1 N N R N N N 7.819 46.956 26.965 -14.392 -0.183 1.349 "C1'" DC9 17 1 non-polymer 2 DC9 N9 N1 N 0 1 Y N N N N N 7.718 46.556 25.558 -14.738 0.102 -0.047 N9 DC9 18 1 non-polymer 2 DC9 C8 C6 C 0 1 Y N N N N N 6.872 47.036 24.600 -13.882 0.383 -1.084 C8 DC9 19 1 non-polymer 2 DC9 N7 N2 N 0 1 Y N N N N N 6.981 46.381 23.402 -14.486 0.598 -2.226 N7 DC9 20 1 non-polymer 2 DC9 C5 C7 C 0 1 Y N N N N N 7.946 45.462 23.659 -15.834 0.447 -1.927 C5 DC9 21 1 non-polymer 2 DC9 C6 C8 C 0 1 N N N N N N 8.483 44.520 22.790 -16.966 0.561 -2.772 C6 DC9 22 1 non-polymer 2 DC9 O6 O11 O 0 1 N N N N N N 8.098 44.401 21.634 -16.996 0.825 -3.983 O6 DC9 23 1 non-polymer 2 DC9 N1 N3 N 0 1 N N N N N N 9.441 43.679 23.269 -18.149 0.331 -2.074 N1 DC9 24 1 non-polymer 2 DC9 C2 C9 C 0 1 N N N N N N 9.839 43.804 24.597 -18.237 0.031 -0.734 C2 DC9 25 1 non-polymer 2 DC9 N2 N4 N 0 1 N N N N N N 10.834 42.933 25.077 -19.471 -0.160 -0.228 N2 DC9 26 1 non-polymer 2 DC9 N3 N5 N 0 1 N N N N N N 9.343 44.742 25.480 -17.175 -0.076 0.064 N3 DC9 27 1 non-polymer 2 DC9 C4 C10 C 0 1 Y N N N N N 8.373 45.565 24.940 -16.011 0.143 -0.596 C4 DC9 28 1 non-polymer 2 DC9 C10 C11 C 0 1 N N N N N N -0.051 47.302 33.316 -4.261 1.710 -0.933 C10 DC9 29 1 non-polymer 2 DC9 C11 C12 C 0 1 N N R N N N -0.935 46.870 34.501 -3.353 2.823 -0.373 C11 DC9 30 1 non-polymer 2 DC9 O11 O12 O 0 1 N N N N N N -0.792 47.800 35.541 -3.629 3.008 1.034 O11 DC9 31 1 non-polymer 2 DC9 C12 C13 C 0 1 N N N N N N -2.408 46.792 34.126 -1.870 2.611 -0.641 C12 DC9 32 1 non-polymer 2 DC9 S12 S1 S -1 1 N N N N N N -2.945 46.326 32.489 -1.216 2.813 -2.174 S12 DC9 33 1 non-polymer 2 DC9 C13 C14 C 0 1 N N N N N N -3.347 47.372 34.917 -1.015 2.242 0.330 C13 DC9 34 1 non-polymer 2 DC9 S13 S2 S -1 1 N N N N N N -5.070 47.473 34.452 0.497 1.680 -0.148 S13 DC9 35 1 non-polymer 2 DC9 C14 C15 C 0 1 N N R N N N -3.038 47.712 36.354 -1.344 2.424 1.819 C14 DC9 36 1 non-polymer 2 DC9 N15 N6 N 0 1 N N N N N N -3.351 49.139 36.572 -0.632 1.453 2.650 N15 DC9 37 1 non-polymer 2 DC9 C16 C16 C 0 1 N N N N N N -3.029 49.586 37.909 -1.194 0.246 3.030 C16 DC9 38 1 non-polymer 2 DC9 C17 C17 C 0 1 N N N N N N -3.813 50.472 38.656 -0.391 -0.814 3.585 C17 DC9 39 1 non-polymer 2 DC9 O17 O13 O 0 1 N N N N N N -4.849 50.949 38.228 0.814 -0.750 3.808 O17 DC9 40 1 non-polymer 2 DC9 N18 N7 N 0 1 N N N N N N -3.423 50.848 39.917 -1.089 -1.978 3.891 N18 DC9 41 1 non-polymer 2 DC9 C19 C18 C 0 1 N N N N N N -2.294 50.309 40.451 -2.430 -2.109 3.666 C19 DC9 42 1 non-polymer 2 DC9 N19 N8 N 0 1 N N N N N N -1.893 50.704 41.743 -3.005 -3.264 3.993 N19 DC9 43 1 non-polymer 2 DC9 N20 N9 N 0 1 N N N N N N -1.535 49.400 39.782 -3.178 -1.137 3.137 N20 DC9 44 1 non-polymer 2 DC9 C21 C19 C 0 1 N N N N N N -1.894 49.051 38.501 -2.564 0.024 2.799 C21 DC9 45 1 non-polymer 2 DC9 N22 N10 N 0 1 N N N N N N -1.097 48.089 37.818 -3.352 1.007 2.283 N22 DC9 46 1 non-polymer 2 DC9 C23 C20 C 0 1 N N R N N N -1.565 47.357 36.638 -2.880 2.376 2.092 C23 DC9 47 1 non-polymer 2 DC9 W W1 W ? 1 N N N N N N -5.320 46.659 32.091 0.941 2.571 -2.056 W DC9 48 2 non-polymer 3 DC9 O15 O27 O -2 1 N N N N N N -4.782 45.540 30.726 1.206 3.401 -3.550 O15 DC9 49 2 non-polymer 3 DC9 PB1 P3 P 0 1 N N N N N N -8.977 54.124 36.065 9.847 -3.289 -0.960 PB1 DC9 50 3 non-polymer 4 DC9 O2 O15 O 0 1 N N N N N N -8.118 53.067 37.074 9.637 -2.961 0.467 O2 DC9 51 3 non-polymer 4 DC9 O1 O14 O 0 1 N N N N N N -7.987 55.368 35.444 9.553 -4.743 -1.298 O1 DC9 52 3 non-polymer 4 DC9 O3 O16 O 0 1 N N N N N N -9.475 53.341 34.731 8.820 -2.445 -1.854 O3 DC9 53 3 non-polymer 4 DC9 O4 O17 O 0 1 N N N N N N -9.755 51.602 32.813 6.519 -1.335 -1.919 O4 DC9 54 3 non-polymer 4 DC9 PA1 P4 P 0 1 N N N N N N -10.368 52.018 34.392 8.064 -1.046 -1.658 PA1 DC9 55 3 non-polymer 4 DC9 O7 O19 O 0 1 N N N N N N -12.019 52.307 34.339 8.664 -0.050 -2.572 O7 DC9 56 3 non-polymer 4 DC9 O5 O18 O 0 1 N N N N N N -9.842 50.873 35.529 8.243 -0.713 -0.184 O5 DC9 57 3 non-polymer 4 DC9 O8 O20 O 0 1 N N N N N N -10.424 54.631 36.832 11.304 -2.964 -1.508 O8 DC9 58 3 non-polymer 4 DC9 C1 C21 C 0 1 N N N N N N -11.408 55.278 36.097 12.509 -3.406 -0.823 C1 DC9 59 3 non-polymer 4 DC9 C3 C22 C 0 1 N N R N N N -11.969 56.356 37.069 13.646 -2.442 -1.101 C3 DC9 60 3 non-polymer 4 DC9 O9 O21 O 0 1 N N N N N N -12.349 55.704 38.286 13.193 -1.089 -0.874 O9 DC9 61 3 non-polymer 4 DC9 C7 C23 C 0 1 N N S N N N -10.914 57.390 37.452 14.913 -2.600 -0.242 C7 DC9 62 3 non-polymer 4 DC9 O10 O22 O 0 1 N N N N N N -11.325 58.630 36.897 16.068 -2.412 -1.055 O10 DC9 63 3 non-polymer 4 DC9 C9 C24 C 0 1 N N R N N N -10.905 57.388 38.965 14.757 -1.528 0.851 C9 DC9 64 3 non-polymer 4 DC9 O12 O23 O 0 1 N N N N N N -10.810 58.660 39.549 16.002 -1.033 1.304 O12 DC9 65 3 non-polymer 4 DC9 C15 C25 C 0 1 N N R N N N -12.259 56.748 39.253 13.956 -0.438 0.135 C15 DC9 66 3 non-polymer 4 DC9 N91 N11 N 0 1 Y N N N N N -12.340 56.109 40.562 13.042 0.283 1.024 N91 DC9 67 3 non-polymer 4 DC9 C81 C26 C 0 1 Y N N N N N -11.324 55.648 41.353 11.775 -0.088 1.397 C81 DC9 68 3 non-polymer 4 DC9 N71 N12 N 0 1 Y N N N N N -11.750 55.103 42.517 11.193 0.762 2.208 N71 DC9 69 3 non-polymer 4 DC9 C51 C27 C 0 1 Y N N N N N -13.096 55.243 42.436 12.144 1.760 2.385 C51 DC9 70 3 non-polymer 4 DC9 C61 C28 C 0 1 N N N N N N -14.109 54.864 43.316 12.082 2.944 3.162 C61 DC9 71 3 non-polymer 4 DC9 O61 O24 O 0 1 N N N N N N -13.894 54.310 44.391 11.146 3.351 3.865 O61 DC9 72 3 non-polymer 4 DC9 N11 N13 N 0 1 N N N N N N -15.399 55.142 42.979 13.261 3.680 3.066 N11 DC9 73 3 non-polymer 4 DC9 C22 C29 C 0 1 N N N N N N -15.707 55.776 41.797 14.362 3.328 2.319 C22 DC9 74 3 non-polymer 4 DC9 N21 N14 N 0 1 N N N N N N -17.074 56.014 41.503 15.417 4.164 2.345 N21 DC9 75 3 non-polymer 4 DC9 N31 N15 N 0 1 N N N N N N -14.724 56.119 40.909 14.424 2.216 1.587 N31 DC9 76 3 non-polymer 4 DC9 C41 C30 C 0 1 Y N N N N N -13.435 55.848 41.271 13.286 1.484 1.667 C41 DC9 77 3 non-polymer 4 DC9 C18 C31 C 0 1 N N N N N N -8.538 50.931 32.875 5.442 -0.385 -1.691 C18 DC9 78 3 non-polymer 4 DC9 C20 C32 C 0 1 N N R N N N -8.165 50.712 31.361 4.587 -0.182 -2.955 C20 DC9 79 3 non-polymer 4 DC9 O13 O25 O 0 1 N N N N N N -7.607 51.935 30.918 4.461 -1.446 -3.649 O13 DC9 80 3 non-polymer 4 DC9 C24 C33 C 0 1 N N N N N N -7.100 49.618 31.346 3.231 0.476 -2.729 C24 DC9 81 3 non-polymer 4 DC9 S1 S3 S -1 1 N N N N N N -7.378 48.023 32.116 3.049 1.999 -2.030 S1 DC9 82 3 non-polymer 4 DC9 C25 C34 C 0 1 N N N N N N -5.927 49.796 30.703 2.090 -0.094 -3.154 C25 DC9 83 3 non-polymer 4 DC9 S2 S4 S -1 1 N N N N N N -4.694 48.529 30.685 0.681 0.808 -3.224 S2 DC9 84 3 non-polymer 4 DC9 C26 C35 C 0 1 N N R N N N -5.630 51.015 29.850 1.982 -1.571 -3.523 C26 DC9 85 3 non-polymer 4 DC9 N4 N16 N 0 1 N N N N N N -4.696 51.856 30.619 0.985 -2.124 -2.607 N4 DC9 86 3 non-polymer 4 DC9 C27 C36 C 0 1 N N N N N N -4.558 53.225 30.177 1.315 -2.874 -1.501 C27 DC9 87 3 non-polymer 4 DC9 C28 C37 C 0 1 N N N N N N -3.456 54.029 30.477 0.355 -3.110 -0.451 C28 DC9 88 3 non-polymer 4 DC9 O14 O26 O 0 1 N N N N N N -2.494 53.629 31.166 -0.808 -2.717 -0.451 O14 DC9 89 3 non-polymer 4 DC9 N5 N17 N 0 1 N N N N N N -3.428 55.316 30.000 0.828 -3.862 0.618 N5 DC9 90 3 non-polymer 4 DC9 C29 C38 C 0 1 N N N N N N -4.436 55.826 29.264 2.111 -4.329 0.673 C29 DC9 91 3 non-polymer 4 DC9 N6 N18 N 0 1 N N N N N N -4.433 57.155 28.751 2.468 -5.040 1.738 N6 DC9 92 3 non-polymer 4 DC9 N8 N19 N 0 1 N N N N N N -5.499 55.048 28.949 3.010 -4.101 -0.289 N8 DC9 93 3 non-polymer 4 DC9 C30 C39 C 0 1 N N N N N N -5.559 53.749 29.389 2.623 -3.371 -1.364 C30 DC9 94 3 non-polymer 4 DC9 N10 N20 N 0 1 N N N N N N -6.746 53.007 29.041 3.567 -3.159 -2.323 N10 DC9 95 3 non-polymer 4 DC9 C31 C40 C 0 1 N N R N N N -7.005 51.723 29.654 3.339 -2.344 -3.517 C31 DC9 96 3 non-polymer 4 DC9 H1 H1 H 0 1 N N N N N N 2.577 49.792 29.146 -8.986 -1.403 -0.799 H1 DC9 97 1 non-polymer 2 DC9 H2 H2 H 0 1 N N N N N N 3.799 45.006 32.376 -6.998 1.958 -2.466 H2 DC9 98 1 non-polymer 2 DC9 H3 H3 H 0 1 N N N N N N 4.528 46.159 28.957 -10.741 -2.078 1.923 H3 DC9 99 1 non-polymer 2 DC9 H4 H4 H 0 1 N N N N N N 4.587 47.886 28.466 -11.493 -1.571 0.597 H4 DC9 100 1 non-polymer 2 DC9 H5 H5 H 0 1 N N N N N N 7.005 46.494 29.770 -11.924 -0.358 3.138 H5 DC9 101 1 non-polymer 2 DC9 H6 H6 H 0 1 N N N N N N 6.420 49.173 28.947 -12.979 -2.741 2.710 H6 DC9 102 1 non-polymer 2 DC9 H7 H7 H 0 1 N N N N N N 8.667 49.433 29.484 -14.265 -2.173 4.372 H7 DC9 103 1 non-polymer 2 DC9 H8 H8 H 0 1 N N N N N N 6.734 48.775 26.694 -14.267 -2.218 0.903 H8 DC9 104 1 non-polymer 2 DC9 H9 H9 H 0 1 N N N N N N 8.932 49.123 26.124 -16.312 -2.059 1.602 H9 DC9 105 1 non-polymer 2 DC9 H10 H10 H 0 1 N N N N N N 8.803 46.662 27.358 -15.014 0.338 1.961 H10 DC9 106 1 non-polymer 2 DC9 H11 H11 H 0 1 N N N N N N 6.185 47.852 24.770 -12.947 0.419 -0.982 H11 DC9 107 1 non-polymer 2 DC9 H12 H12 H 0 1 N N N N N N 9.851 42.985 22.678 -18.907 0.387 -2.545 H12 DC9 108 1 non-polymer 2 DC9 H13 H13 H 0 1 N N N N N N 11.152 43.010 26.022 -19.564 -0.353 0.623 H13 DC9 109 1 non-polymer 2 DC9 H14 H14 H 0 1 N N N N N N 11.223 42.237 24.473 -20.185 -0.094 -0.734 H14 DC9 110 1 non-polymer 2 DC9 H15 H15 H 0 1 N N N N N N -0.114 48.389 33.158 -4.436 1.894 -1.882 H15 DC9 111 1 non-polymer 2 DC9 H16 H16 H 0 1 N N N N N N -0.350 46.780 32.395 -3.784 0.854 -0.878 H16 DC9 112 1 non-polymer 2 DC9 H17 H17 H 0 1 N N N N N N -0.605 45.875 34.834 -3.598 3.660 -0.851 H17 DC9 113 1 non-polymer 2 DC9 H18 H18 H 0 1 N N N N N N -3.675 47.098 37.008 -1.040 3.330 2.083 H18 DC9 114 1 non-polymer 2 DC9 H21 H21 H 0 1 N N N N N N -1.065 50.317 42.150 -3.866 -3.381 3.860 H21 DC9 115 1 non-polymer 2 DC9 H22 H22 H 0 1 N N N N N N -2.436 51.371 42.253 -2.532 -3.916 4.341 H22 DC9 116 1 non-polymer 2 DC9 H23 H23 H 0 1 N N N N N N -0.268 48.571 37.533 -4.182 0.801 2.054 H23 DC9 117 1 non-polymer 2 DC9 H24 H24 H 0 1 N N N N N N -1.468 46.272 36.789 -3.061 2.867 2.931 H24 DC9 118 1 non-polymer 2 DC9 H19 H19 H 0 1 N N N N N N -2.827 49.684 35.918 0.174 1.633 2.923 H19 DC9 119 1 non-polymer 2 DC9 H20 H20 H 0 1 N N N N N N -3.962 51.510 40.437 -0.645 -2.652 4.242 H20 DC9 120 1 non-polymer 2 DC9 H25 H25 H 0 1 N N N N N N -7.102 55.262 35.772 10.059 -5.317 -0.851 H25 DC9 121 3 non-polymer 4 DC9 H26 H26 H 0 1 N N N N N N -10.590 50.533 36.006 7.928 0.084 0.042 H26 DC9 122 3 non-polymer 4 DC9 H27 H27 H 0 1 N N N N N N -10.978 55.748 35.200 12.760 -4.311 -1.139 H27 DC9 123 3 non-polymer 4 DC9 H28 H28 H 0 1 N N N N N N -12.198 54.573 35.799 12.341 -3.451 0.154 H28 DC9 124 3 non-polymer 4 DC9 H29 H29 H 0 1 N N N N N N -12.829 56.857 36.602 13.896 -2.537 -2.055 H29 DC9 125 3 non-polymer 4 DC9 H30 H30 H 0 1 N N N N N N -9.930 57.082 37.067 14.951 -3.500 0.176 H30 DC9 126 3 non-polymer 4 DC9 H31 H31 H 0 1 N N N N N N -10.690 59.301 37.116 16.766 -2.610 -0.630 H31 DC9 127 3 non-polymer 4 DC9 H32 H32 H 0 1 N N N N N N -10.105 56.726 39.327 14.231 -1.888 1.611 H32 DC9 128 3 non-polymer 4 DC9 H33 H33 H 0 1 N N N N N N -10.810 58.575 40.495 15.902 -0.562 1.994 H33 DC9 129 3 non-polymer 4 DC9 H34 H34 H 0 1 N N N N N N -13.062 57.489 39.124 14.599 0.220 -0.296 H34 DC9 130 3 non-polymer 4 DC9 H35 H35 H 0 1 N N N N N N -10.282 55.712 41.076 11.362 -0.878 1.094 H35 DC9 131 3 non-polymer 4 DC9 H36 H36 H 0 1 N N N N N N -16.136 54.881 43.602 13.294 4.442 3.532 H36 DC9 132 3 non-polymer 4 DC9 H37 H37 H 0 1 N N N N N N -17.332 56.439 40.635 16.135 3.969 1.880 H37 DC9 133 3 non-polymer 4 DC9 H38 H38 H 0 1 N N N N N N -17.780 55.757 42.163 15.400 4.903 2.820 H38 DC9 134 3 non-polymer 4 DC9 H39 H39 H 0 1 N N N N N N -7.777 51.542 33.384 5.813 0.481 -1.416 H39 DC9 135 3 non-polymer 4 DC9 H40 H40 H 0 1 N N N N N N -8.645 49.969 33.397 4.864 -0.707 -0.966 H40 DC9 136 3 non-polymer 4 DC9 H41 H41 H 0 1 N N N N N N -9.052 50.411 30.785 5.093 0.443 -3.540 H41 DC9 137 3 non-polymer 4 DC9 H42 H42 H 0 1 N N N N N N -5.207 50.722 28.878 1.620 -1.632 -4.443 H42 DC9 138 3 non-polymer 4 DC9 H46 H46 H 0 1 N N N N N N -5.194 57.475 28.186 3.285 -5.357 1.803 H46 DC9 139 3 non-polymer 4 DC9 H47 H47 H 0 1 N N N N N N -3.670 57.768 28.956 1.894 -5.197 2.384 H47 DC9 140 3 non-polymer 4 DC9 H48 H48 H 0 1 N N N N N N -7.526 53.593 29.259 4.358 -3.540 -2.218 H48 DC9 141 3 non-polymer 4 DC9 H49 H49 H 0 1 N N N N N N -7.643 51.103 29.007 3.347 -2.957 -4.294 H49 DC9 142 3 non-polymer 4 DC9 H43 H43 H 0 1 N N N N N N -5.011 51.872 31.568 0.141 -1.978 -2.759 H43 DC9 143 3 non-polymer 4 DC9 H44 H44 H 0 1 N N N N N N -2.637 55.892 30.204 0.277 -4.043 1.280 H44 DC9 144 3 non-polymer 4 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_metal_coordination_flag _chem_comp_bond.pdbx_metal_pi_flag DC9 PB O1B DOUB N N 1 N N DC9 PB O2B SING N N 2 N N DC9 PB O3B SING N N 3 N N DC9 PB "O5'" SING N N 4 N N DC9 O3B PA SING N N 5 N N DC9 O3A PA SING N N 6 N N DC9 O3A C10 SING N N 7 N N DC9 PA O2A DOUB N N 8 N N DC9 PA O1A SING N N 9 N N DC9 "O5'" "C5'" SING N N 10 N N DC9 "C5'" "C4'" SING N N 11 N N DC9 "C4'" "O4'" SING N N 12 N N DC9 "C4'" "C3'" SING N N 13 N N DC9 "O4'" "C1'" SING N N 14 N N DC9 "C3'" "C2'" SING N N 15 N N DC9 "C3'" "O3'" SING N N 16 N N DC9 "C2'" "C1'" SING N N 17 N N DC9 "C2'" "O2'" SING N N 18 N N DC9 "C1'" N9 SING N N 19 N N DC9 N9 C8 SING Y N 20 N N DC9 N9 C4 SING Y N 21 N N DC9 C8 N7 DOUB Y N 22 N N DC9 N7 C5 SING Y N 23 N N DC9 C5 C6 SING N N 24 N N DC9 C5 C4 DOUB Y N 25 N N DC9 C6 O6 DOUB N N 26 N N DC9 C6 N1 SING N N 27 N N DC9 N1 C2 SING N N 28 N N DC9 C2 N2 SING N N 29 N N DC9 C2 N3 DOUB N N 30 N N DC9 N3 C4 SING N N 31 N N DC9 C10 C11 SING N N 32 N N DC9 C11 C12 SING N N 33 N N DC9 C11 O11 SING N N 34 N N DC9 O11 C23 SING N N 35 N N DC9 C12 S12 SING N N 36 N N DC9 C12 C13 DOUB N N 37 N N DC9 S12 W SING N N 38 Y N DC9 C13 S13 SING N N 39 N N DC9 C13 C14 SING N N 40 N N DC9 S13 W SING N N 41 Y N DC9 C14 C23 SING N N 42 N N DC9 C14 N15 SING N N 43 N N DC9 N15 C16 SING N N 44 N N DC9 C16 C21 DOUB N N 45 N N DC9 C16 C17 SING N N 46 N N DC9 C17 O17 DOUB N N 47 N N DC9 C17 N18 SING N N 48 N N DC9 N18 C19 SING N N 49 N N DC9 C19 N20 DOUB N N 50 N N DC9 C19 N19 SING N N 51 N N DC9 N20 C21 SING N N 52 N N DC9 C21 N22 SING N N 53 N N DC9 N22 C23 SING N N 54 N N DC9 PB1 O3 SING N N 55 N N DC9 PB1 O2 DOUB N N 56 N N DC9 PB1 O8 SING N N 57 N N DC9 PB1 O1 SING N N 58 N N DC9 O3 PA1 SING N N 59 N N DC9 O4 PA1 SING N N 60 N N DC9 O4 C18 SING N N 61 N N DC9 PA1 O7 DOUB N N 62 N N DC9 PA1 O5 SING N N 63 N N DC9 O8 C1 SING N N 64 N N DC9 C1 C3 SING N N 65 N N DC9 C3 C7 SING N N 66 N N DC9 C3 O9 SING N N 67 N N DC9 O9 C15 SING N N 68 N N DC9 C7 O10 SING N N 69 N N DC9 C7 C9 SING N N 70 N N DC9 C9 O12 SING N N 71 N N DC9 C9 C15 SING N N 72 N N DC9 C15 N91 SING N N 73 N N DC9 N91 C41 SING Y N 74 N N DC9 N91 C81 SING Y N 75 N N DC9 C81 N71 DOUB Y N 76 N N DC9 N71 C51 SING Y N 77 N N DC9 C51 C61 SING N N 78 N N DC9 C51 C41 DOUB Y N 79 N N DC9 C61 N11 SING N N 80 N N DC9 C61 O61 DOUB N N 81 N N DC9 N11 C22 SING N N 82 N N DC9 C22 N31 DOUB N N 83 N N DC9 C22 N21 SING N N 84 N N DC9 N31 C41 SING N N 85 N N DC9 C18 C20 SING N N 86 N N DC9 C20 C24 SING N N 87 N N DC9 C20 O13 SING N N 88 N N DC9 O13 C31 SING N N 89 N N DC9 C24 S1 SING N N 90 N N DC9 C24 C25 DOUB N N 91 N N DC9 S1 W SING N N 92 Y N DC9 C25 S2 SING N N 93 N N DC9 C25 C26 SING N N 94 N N DC9 S2 W SING N N 95 Y N DC9 C26 C31 SING N N 96 N N DC9 C26 N4 SING N N 97 N N DC9 N4 C27 SING N N 98 N N DC9 C27 C30 DOUB N N 99 N N DC9 C27 C28 SING N N 100 N N DC9 C28 O14 DOUB N N 101 N N DC9 C28 N5 SING N N 102 N N DC9 N5 C29 SING N N 103 N N DC9 C29 N8 DOUB N N 104 N N DC9 C29 N6 SING N N 105 N N DC9 N8 C30 SING N N 106 N N DC9 C30 N10 SING N N 107 N N DC9 N10 C31 SING N N 108 N N DC9 W O15 DOUB N N 109 Y N DC9 O2B H1 SING N N 110 N N DC9 O1A H2 SING N N 111 N N DC9 "C5'" H3 SING N N 112 N N DC9 "C5'" H4 SING N N 113 N N DC9 "C4'" H5 SING N N 114 N N DC9 "C3'" H6 SING N N 115 N N DC9 "O3'" H7 SING N N 116 N N DC9 "C2'" H8 SING N N 117 N N DC9 "O2'" H9 SING N N 118 N N DC9 "C1'" H10 SING N N 119 N N DC9 C8 H11 SING N N 120 N N DC9 N1 H12 SING N N 121 N N DC9 N2 H13 SING N N 122 N N DC9 N2 H14 SING N N 123 N N DC9 C10 H15 SING N N 124 N N DC9 C10 H16 SING N N 125 N N DC9 C11 H17 SING N N 126 N N DC9 C14 H18 SING N N 127 N N DC9 N15 H19 SING N N 128 N N DC9 N18 H20 SING N N 129 N N DC9 N19 H21 SING N N 130 N N DC9 N19 H22 SING N N 131 N N DC9 N22 H23 SING N N 132 N N DC9 C23 H24 SING N N 133 N N DC9 O1 H25 SING N N 134 N N DC9 O5 H26 SING N N 135 N N DC9 C1 H27 SING N N 136 N N DC9 C1 H28 SING N N 137 N N DC9 C3 H29 SING N N 138 N N DC9 C7 H30 SING N N 139 N N DC9 O10 H31 SING N N 140 N N DC9 C9 H32 SING N N 141 N N DC9 O12 H33 SING N N 142 N N DC9 C15 H34 SING N N 143 N N DC9 C81 H35 SING N N 144 N N DC9 N11 H36 SING N N 145 N N DC9 N21 H37 SING N N 146 N N DC9 N21 H38 SING N N 147 N N DC9 C18 H39 SING N N 148 N N DC9 C18 H40 SING N N 149 N N DC9 C20 H41 SING N N 150 N N DC9 C26 H42 SING N N 151 N N DC9 N4 H43 SING N N 152 N N DC9 N6 H46 SING N N 153 N N DC9 N6 H47 SING N N 154 N N DC9 N10 H48 SING N N 155 N N DC9 C31 H49 SING N N 156 N N DC9 H44 N5 SING N N 157 N N # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DC9 InChI InChI 1.06 "InChI=1S/2C20H26N10O13P2S2.O.W/c2*21-19-26-13-7(15(33)28-19)24-6-12(47)11(46)5(41-17(6)25-13)2-40-45(37,38)43-44(35,36)39-1-4-9(31)10(32)18(42-4)30-3-23-8-14(30)27-20(22)29-16(8)34;;/h2*3-6,9-10,17-18,24,31-32,46-47H,1-2H2,(H,35,36)(H,37,38)(H3,22,27,29,34)(H4,21,25,26,28,33);;/q;;;+4/p-4/t2*4-,5-,6+,9-,10-,17-,18-;;/m11../s1" DC9 InChIKey InChI 1.06 ABWAXDBZHRRZAE-HWCCSRDCSA-J DC9 SMILES_CANONICAL CACTVS 3.385 "NC1=NC2=C(N[C@@H]3[C@H](N2)O[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@H]4O[C@H]([C@H](O)[C@@H]4O)n5cnc6C(=O)NC(=Nc56)N)C7=C3S[W]8(=O)(S7)SC9=C(S8)[C@@H]%10NC%11=C(N[C@@H]%10O[C@@H]9CO[P](O)(=O)O[P](O)(=O)OC[C@H]%12O[C@H]([C@H](O)[C@@H]%12O)n%13cnc%14C(=O)NC(=Nc%13%14)N)N=C(N)NC%11=O)C(=O)N1" DC9 SMILES CACTVS 3.385 "NC1=NC2=C(N[CH]3[CH](N2)O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]4O[CH]([CH](O)[CH]4O)n5cnc6C(=O)NC(=Nc56)N)C7=C3S[W]8(=O)(S7)SC9=C(S8)[CH]%10NC%11=C(N[CH]%10O[CH]9CO[P](O)(=O)O[P](O)(=O)OC[CH]%12O[CH]([CH](O)[CH]%12O)n%13cnc%14C(=O)NC(=Nc%13%14)N)N=C(N)NC%11=O)C(=O)N1" DC9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OC[C@@H]4C5=C([C@H]6[C@@H](O4)NC7=C(N6)C(=O)NC(=N7)N)S[W]8(=O)(S5)SC9=C(S8)[C@H]1[C@H](NC3=C(N1)C(=O)NC(=N3)N)O[C@@H]9COP(=O)(O)OP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n1cnc3c1N=C(NC3=O)N)O)O)O)O)N=C(NC2=O)N" DC9 SMILES "OpenEye OEToolkits" 2.0.7 "c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OCC4C5=C(C6C(O4)NC7=C(N6)C(=O)NC(=N7)N)S[W]8(=O)(S5)SC9=C(S8)C1C(NC3=C(N1)C(=O)NC(=N3)N)OC9COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n1cnc3c1N=C(NC3=O)N)O)O)O)O)N=C(NC2=O)N" # _pdbx_chem_comp_identifier.comp_id DC9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier ;[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(1~{R},1'~{R},10~{R},10'~{R},16~{R},16'~{R})-5,5'-bis(azanyl)-16'-[[[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-7,7',13-tris(oxidanylidene)-13,13'-spirobi[17-oxa-12,14-dithia-2,4,6,9-tetraza-13$l^{6}-tungstatetracyclo[8.7.0.0^{3,8}.0^{11,15}]heptadeca-3(8),4,11(15)-triene]-16-yl]methyl hydrogen phosphate ; # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id DC9 _pdbx_chem_comp_pcm.modified_residue_id SER _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Metal coordination" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom W _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? _pdbx_chem_comp_pcm.position "Amino-acid side chain" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DC9 "Create component" 2026-04-20 RCSB DC9 "Other modification" 2026-07-31 RCSB DC9 "Initial release" 2026-09-02 RCSB DC9 "Other modification" 2026-09-01 RCSB #