data_DCF # _chem_comp.id DCF _chem_comp.name "2'-DEOXYCOFORMYCIN" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H16 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 268.269 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DCF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1A4L _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DCF N1 N1 N 0 1 Y N N 72.504 68.757 101.099 1.693 -0.821 -1.421 N1 DCF 1 DCF C2 C2 C 0 1 Y N N 72.344 69.187 102.336 1.419 -0.589 -0.170 C2 DCF 2 DCF N3 N3 N 0 1 Y N N 73.534 69.422 102.936 0.195 -0.010 -0.092 N3 DCF 3 DCF C9 C9 C 0 1 Y N N 73.882 68.717 100.878 0.670 -0.409 -2.195 C9 DCF 4 DCF C10 C10 C 0 1 Y N N 74.541 69.121 101.997 -0.284 0.108 -1.387 C10 DCF 5 DCF N4 N4 N 0 1 N N N 75.832 69.011 102.469 -1.483 0.664 -1.679 N4 DCF 6 DCF C5 C5 C 0 1 N N N 76.796 68.549 101.760 -2.026 0.868 -2.814 C5 DCF 7 DCF N6 N6 N 0 1 N N N 76.764 68.023 100.528 -1.517 0.532 -4.017 N6 DCF 8 DCF C7 C7 C 0 1 N N N 75.868 68.376 99.432 -0.108 0.584 -4.353 C7 DCF 9 DCF C8 C8 C 0 1 N N R 74.431 68.007 99.704 0.658 -0.544 -3.692 C8 DCF 10 DCF O8 O8 O 0 1 N N N 74.330 66.408 99.778 2.004 -0.534 -4.172 O8 DCF 11 DCF C2S C2S C 0 1 N N N 72.935 71.427 104.435 -1.341 -0.759 1.680 C2S DCF 12 DCF C3S C3S C 0 1 N N S 71.944 71.034 105.517 -0.791 -0.989 3.111 C3S DCF 13 DCF O3S O3S O 0 1 N N N 71.654 72.139 106.380 -1.854 -1.242 4.031 O3S DCF 14 DCF O5S O5S O 0 1 N N N 70.766 68.450 106.294 1.651 1.438 4.685 O5S DCF 15 DCF C5S C5S C 0 1 N N N 71.746 69.081 107.096 0.997 0.186 4.463 C5S DCF 16 DCF C4S C4S C 0 1 N N R 72.689 69.950 106.265 -0.100 0.364 3.413 C4S DCF 17 DCF O4S O4S O 0 1 N N N 73.396 69.207 105.262 0.468 0.747 2.142 O4S DCF 18 DCF C1S C1S C 0 1 N N R 73.757 70.127 104.209 -0.494 0.404 1.131 C1S DCF 19 DCF H2 H2 H 0 1 N N N 71.354 69.329 102.802 2.061 -0.818 0.667 H2 DCF 20 DCF H5 H5 H 0 1 N N N 77.771 68.611 102.272 -2.988 1.359 -2.812 H5 DCF 21 DCF HN6 HN6 H 0 1 N N N 76.662 67.016 100.657 -2.135 0.237 -4.704 HN6 DCF 22 DCF H71 1H7 H 0 1 N N N 75.959 69.457 99.175 0.302 1.537 -4.019 H71 DCF 23 DCF H72 2H7 H 0 1 N N N 76.218 67.930 98.471 0.004 0.507 -5.434 H72 DCF 24 DCF H8 H8 H 0 1 N N N 73.776 68.350 98.869 0.193 -1.493 -3.959 H8 DCF 25 DCF HO8 HO8 H 0 1 N N N 74.682 65.951 99.023 1.959 -0.622 -5.134 HO8 DCF 26 DCF H2S1 1H2S H 0 0 N N N 72.470 71.846 103.512 -2.393 -0.480 1.719 H2S1 DCF 27 DCF H2S2 2H2S H 0 0 N N N 73.548 72.326 104.674 -1.204 -1.651 1.069 H2S2 DCF 28 DCF H3S H3S H 0 1 N N N 70.957 70.705 105.114 -0.066 -1.804 3.123 H3S DCF 29 DCF HO3 HO3 H 0 1 N N N 71.034 71.893 107.056 -2.297 -2.048 3.732 HO3 DCF 30 DCF HO5 HO5 H 0 1 N N N 70.179 67.909 106.810 2.334 1.282 5.352 HO5 DCF 31 DCF H5S1 1H5S H 0 0 N N N 71.278 69.665 107.922 1.724 -0.544 4.109 H5S1 DCF 32 DCF H5S2 2H5S H 0 0 N N N 72.311 68.337 107.705 0.555 -0.162 5.396 H5S2 DCF 33 DCF H4S H4S H 0 1 N N N 73.398 70.375 107.012 -0.830 1.102 3.744 H4S DCF 34 DCF H1S H1S H 0 1 N N N 74.824 70.448 104.197 -1.133 1.262 0.923 H1S DCF 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DCF N1 C2 DOUB Y N 1 DCF N1 C9 SING Y N 2 DCF C2 N3 SING Y N 3 DCF C2 H2 SING N N 4 DCF N3 C10 SING Y N 5 DCF N3 C1S SING N N 6 DCF C9 C10 DOUB Y N 7 DCF C9 C8 SING N N 8 DCF C10 N4 SING N N 9 DCF N4 C5 DOUB N N 10 DCF C5 N6 SING N N 11 DCF C5 H5 SING N N 12 DCF N6 C7 SING N N 13 DCF N6 HN6 SING N N 14 DCF C7 C8 SING N N 15 DCF C7 H71 SING N N 16 DCF C7 H72 SING N N 17 DCF C8 O8 SING N N 18 DCF C8 H8 SING N N 19 DCF O8 HO8 SING N N 20 DCF C2S C3S SING N N 21 DCF C2S C1S SING N N 22 DCF C2S H2S1 SING N N 23 DCF C2S H2S2 SING N N 24 DCF C3S O3S SING N N 25 DCF C3S C4S SING N N 26 DCF C3S H3S SING N N 27 DCF O3S HO3 SING N N 28 DCF O5S C5S SING N N 29 DCF O5S HO5 SING N N 30 DCF C5S C4S SING N N 31 DCF C5S H5S1 SING N N 32 DCF C5S H5S2 SING N N 33 DCF C4S O4S SING N N 34 DCF C4S H4S SING N N 35 DCF O4S C1S SING N N 36 DCF C1S H1S SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DCF SMILES ACDLabs 10.04 "n2c1c(N=CNCC1O)n(c2)C3OC(C(O)C3)CO" DCF SMILES_CANONICAL CACTVS 3.341 "OC[C@H]1O[C@H](C[C@@H]1O)n2cnc3[C@H](O)CNC=Nc23" DCF SMILES CACTVS 3.341 "OC[CH]1O[CH](C[CH]1O)n2cnc3[CH](O)CNC=Nc23" DCF SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1[C@H]3C[C@@H]([C@H](O3)CO)O)N=CNC[C@H]2O" DCF SMILES "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1C3CC(C(O3)CO)O)N=CNCC2O" DCF InChI InChI 1.03 "InChI=1S/C11H16N4O4/c16-3-8-6(17)1-9(19-8)15-5-14-10-7(18)2-12-4-13-11(10)15/h4-9,16-18H,1-3H2,(H,12,13)/t6-,7+,8+,9+/m0/s1" DCF InChIKey InChI 1.03 FPVKHBSQESCIEP-JQCXWYLXSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier DCF "SYSTEMATIC NAME" ACDLabs 10.04 "(8R)-3-(2-deoxy-beta-D-erythro-pentofuranosyl)-3,6,7,8-tetrahydroimidazo[4,5-d][1,3]diazepin-8-ol" DCF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(8R)-3-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-7,8-dihydro-6H-imidazo[4,5-f][1,3]diazepin-8-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DCF "Create component" 1999-07-08 EBI DCF "Modify descriptor" 2011-06-04 RCSB #