data_DDD # _chem_comp.id DDD _chem_comp.name "(5R,10S)-5-{[(CARBOXYMETHYL)AMINO]CARBONYL}-7-OXO-3-THIA-1,6-DIAZABICYCLO[4.4.1]UNDECANE-10-CARBOXYLIC ACID" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H17 N3 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2007-04-30 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 331.345 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DDD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "Corina V3.40" _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DDD O31 O31 O 0 1 N N N 3.813 14.777 25.253 5.614 0.680 -0.135 O31 DDD 1 DDD C3 C3 C 0 1 N N N 2.961 15.082 24.386 4.359 1.106 -0.349 C3 DDD 2 DDD O32 O32 O 0 1 N N N 3.276 15.218 23.186 4.162 2.227 -0.754 O32 DDD 3 DDD CA4 CA4 C 0 1 N N S 1.480 15.291 24.871 3.195 0.186 -0.083 CA4 DDD 4 DDD CB2 CB2 C 0 1 N N N 0.402 14.823 23.872 3.319 -1.058 -0.963 CB2 DDD 5 DDD CG2 CG2 C 0 1 N N N 0.329 15.701 22.603 2.624 -2.264 -0.392 CG2 DDD 6 DDD CD1 CD1 C 0 1 N N N -0.532 16.977 23.010 1.337 -2.150 0.311 CD1 DDD 7 DDD OE1 OE1 O 0 1 N N N -1.716 17.100 22.588 1.007 -2.993 1.118 OE1 DDD 8 DDD N2 N2 N 0 1 N N N 0.065 17.913 23.761 0.522 -1.099 0.052 N2 DDD 9 DDD CA3 CA3 C 0 1 N N N 1.451 17.700 24.254 0.996 -0.137 -0.870 CA3 DDD 10 DDD N3 N3 N 0 1 N N N 1.376 16.656 25.299 1.901 0.904 -0.402 N3 DDD 11 DDD CD2 CD2 C 0 1 N N N 0.617 16.872 26.570 1.531 1.430 0.958 CD2 DDD 12 DDD SD SD S 0 1 N N N -1.211 17.127 26.243 -0.234 1.625 1.145 SD DDD 13 DDD CB1 CB1 C 0 1 N N N -1.150 18.856 25.817 -0.752 -0.006 1.740 CB1 DDD 14 DDD CA2 CA2 C 0 1 N N R -0.802 19.050 24.245 -0.828 -1.013 0.670 CA2 DDD 15 DDD C2 C2 C 0 1 N N N -0.173 20.472 23.946 -1.839 -0.588 -0.363 C2 DDD 16 DDD O2 O2 O 0 1 N N N 1.054 20.591 23.748 -1.521 -0.518 -1.531 O2 DDD 17 DDD N1 N1 N 0 1 N N N -1.066 21.487 23.803 -3.099 -0.287 0.011 N1 DDD 18 DDD CA1 CA1 C 0 1 N N N -0.849 22.939 23.564 -4.082 0.125 -0.993 CA1 DDD 19 DDD C1 C1 C 0 1 N N N -0.226 23.469 22.286 -5.402 0.403 -0.320 C1 DDD 20 DDD O11 O11 O 0 1 N N N 0.695 24.314 22.504 -6.457 0.798 -1.049 O11 DDD 21 DDD O12 O12 O 0 1 N N N -0.730 23.116 21.175 -5.509 0.270 0.876 O12 DDD 22 DDD HO31 HO31 H 0 0 N N N 4.664 14.681 24.842 6.327 1.306 -0.319 HO31 DDD 23 DDD HA4 HA4 H 0 1 N N N 1.260 14.626 25.719 3.198 -0.110 0.966 HA4 DDD 24 DDD HB21 1HB2 H 0 0 N N N 0.639 13.793 23.566 2.890 -0.838 -1.941 HB21 DDD 25 DDD HB22 2HB2 H 0 0 N N N -0.571 14.895 24.379 4.375 -1.292 -1.092 HB22 DDD 26 DDD HG21 1HG2 H 0 0 N N N 1.336 15.999 22.277 2.477 -2.966 -1.213 HG21 DDD 27 DDD HG22 2HG2 H 0 0 N N N -0.126 15.158 21.762 3.323 -2.737 0.297 HG22 DDD 28 DDD HA31 1HA3 H 0 0 N N N 2.104 17.373 23.432 1.501 -0.674 -1.673 HA31 DDD 29 DDD HA32 2HA3 H 0 0 N N N 1.873 18.632 24.658 0.128 0.355 -1.307 HA32 DDD 30 DDD HD21 1HD2 H 0 0 N N N 0.742 15.988 27.213 1.893 0.736 1.717 HD21 DDD 31 DDD HD22 2HD2 H 0 0 N N N 1.011 17.775 27.059 2.011 2.397 1.107 HD22 DDD 32 DDD HB11 1HB1 H 0 0 N N N -2.129 19.312 26.027 -0.040 -0.347 2.492 HB11 DDD 33 DDD HB12 2HB1 H 0 0 N N N -0.364 19.340 26.415 -1.733 0.086 2.205 HB12 DDD 34 DDD HA2 HA2 H 0 1 N N N -1.742 19.019 23.674 -1.107 -1.979 1.089 HA2 DDD 35 DDD HN1 HN1 H 0 1 N N N -2.025 21.213 23.869 -3.354 -0.343 0.945 HN1 DDD 36 DDD HA11 1HA1 H 0 0 N N N -1.849 23.395 23.612 -3.733 1.028 -1.494 HA11 DDD 37 DDD HA12 2HA1 H 0 0 N N N -0.088 23.190 24.318 -4.209 -0.671 -1.726 HA12 DDD 38 DDD HO11 HO11 H 0 0 N N N 0.989 24.682 21.679 -7.282 0.964 -0.573 HO11 DDD 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DDD O31 C3 SING N N 1 DDD O31 HO31 SING N N 2 DDD C3 O32 DOUB N N 3 DDD C3 CA4 SING N N 4 DDD CA4 CB2 SING N N 5 DDD CA4 N3 SING N N 6 DDD CA4 HA4 SING N N 7 DDD CB2 CG2 SING N N 8 DDD CB2 HB21 SING N N 9 DDD CB2 HB22 SING N N 10 DDD CG2 CD1 SING N N 11 DDD CG2 HG21 SING N N 12 DDD CG2 HG22 SING N N 13 DDD CD1 OE1 DOUB N N 14 DDD CD1 N2 SING N N 15 DDD N2 CA2 SING N N 16 DDD N2 CA3 SING N N 17 DDD CA3 N3 SING N N 18 DDD CA3 HA31 SING N N 19 DDD CA3 HA32 SING N N 20 DDD N3 CD2 SING N N 21 DDD CD2 SD SING N N 22 DDD CD2 HD21 SING N N 23 DDD CD2 HD22 SING N N 24 DDD SD CB1 SING N N 25 DDD CB1 CA2 SING N N 26 DDD CB1 HB11 SING N N 27 DDD CB1 HB12 SING N N 28 DDD CA2 C2 SING N N 29 DDD CA2 HA2 SING N N 30 DDD C2 O2 DOUB N N 31 DDD C2 N1 SING N N 32 DDD N1 CA1 SING N N 33 DDD N1 HN1 SING N N 34 DDD CA1 C1 SING N N 35 DDD CA1 HA11 SING N N 36 DDD CA1 HA12 SING N N 37 DDD C1 O12 DOUB N N 38 DDD C1 O11 SING N N 39 DDD O11 HO11 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DDD SMILES ACDLabs 10.04 "O=C(O)CNC(=O)C2N1C(=O)CCC(N(C1)CSC2)C(=O)O" DDD SMILES_CANONICAL CACTVS 3.341 "OC(=O)CNC(=O)[C@@H]1CSCN2CN1C(=O)CC[C@H]2C(O)=O" DDD SMILES CACTVS 3.341 "OC(=O)CNC(=O)[CH]1CSCN2CN1C(=O)CC[CH]2C(O)=O" DDD SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C1CC(=O)N2C[N@]([C@@H]1C(=O)O)CSC[C@H]2C(=O)NCC(=O)O" DDD SMILES "OpenEye OEToolkits" 1.5.0 "C1CC(=O)N2CN(C1C(=O)O)CSCC2C(=O)NCC(=O)O" DDD InChI InChI 1.03 "InChI=1S/C12H17N3O6S/c16-9-2-1-7(12(20)21)14-5-15(9)8(4-22-6-14)11(19)13-3-10(17)18/h7-8H,1-6H2,(H,13,19)(H,17,18)(H,20,21)/t7-,8-/m0/s1" DDD InChIKey InChI 1.03 FNEMNSFAPZMNDP-YUMQZZPRSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier DDD "SYSTEMATIC NAME" ACDLabs 10.04 "(5R,10S)-5-[(carboxymethyl)carbamoyl]-7-oxo-3-thia-1,6-diazabicyclo[4.4.1]undecane-10-carboxylic acid" DDD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,6S,7S)-2-(carboxymethylcarbamoyl)-10-oxo-4-thia-1,6-diazabicyclo[4.4.1]undecane-7-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DDD "Create component" 2007-04-30 RCSB DDD "Modify descriptor" 2011-06-04 RCSB #