data_DDH # _chem_comp.id DDH _chem_comp.name "[7,12-DEACETYL-3,8,13,17-TETRAMETHYL-21H,23H-PORPHINE-2,18-DIPROPANOATO(2-)-N21,N22,N23,N24]-IRON" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C34 H32 Fe N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms DIACETYLDEUTEROHEME _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2023-09-23 _chem_comp.pdbx_ambiguous_flag Y _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 648.486 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DDH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 1B86 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DDH FE FE FE 0 0 N N N -5.689 57.028 20.961 ? ? ? FE DDH 1 DDH NA "N A" N 0 1 N N S -6.305 56.304 22.540 ? ? ? NA DDH 2 DDH NB "N B" N 0 1 N N N -6.711 58.678 21.586 ? ? ? NB DDH 3 DDH NC "N C" N 0 1 Y N N -4.994 57.967 19.390 ? ? ? NC DDH 4 DDH ND "N D" N 0 1 N N N -4.467 55.428 20.527 ? ? ? ND DDH 5 DDH C1A C1A C 0 1 N N N -5.993 54.975 22.896 ? ? ? C1A DDH 6 DDH CHA CHA C 0 1 N N N -5.423 53.935 22.193 ? ? ? CHA DDH 7 DDH C4D C4D C 0 1 N N N -4.704 54.176 21.042 ? ? ? C4D DDH 8 DDH C1B C1B C 0 1 N N N -7.463 58.876 22.704 ? ? ? C1B DDH 9 DDH CHB CHB C 0 1 N N N -7.573 58.056 23.804 ? ? ? CHB DDH 10 DDH C4A C4A C 0 1 N N N -7.164 56.764 23.542 ? ? ? C4A DDH 11 DDH C1C C1C C 0 1 Y N N -5.196 59.322 19.101 ? ? ? C1C DDH 12 DDH CHC CHC C 0 1 N N N -6.062 60.175 19.741 ? ? ? CHC DDH 13 DDH C4B C4B C 0 1 N N N -6.833 59.824 20.817 ? ? ? C4B DDH 14 DDH C1D C1D C 0 1 N N N -3.873 55.251 19.298 ? ? ? C1D DDH 15 DDH CHD CHD C 0 1 N N N -3.508 56.253 18.425 ? ? ? CHD DDH 16 DDH C4C C4C C 0 1 Y N N -4.056 57.531 18.465 ? ? ? C4C DDH 17 DDH C2A C2A C 0 1 N N N -6.544 54.706 24.199 ? ? ? C2A DDH 18 DDH CAA CAA C 0 1 N N N -6.536 53.279 24.789 ? ? ? CAA DDH 19 DDH C3A C3A C 0 1 N N N -7.250 55.780 24.581 ? ? ? C3A DDH 20 DDH CMA CMA C 0 1 N N N -8.195 55.885 25.796 ? ? ? CMA DDH 21 DDH CBA CBA C 0 1 N N N -5.466 53.073 25.876 ? ? ? CBA DDH 22 DDH CGA CGA C 0 1 N N N -5.415 51.705 26.542 ? ? ? CGA DDH 23 DDH O1A O1A O 0 1 N N N -6.221 51.437 27.463 ? ? ? O1A DDH 24 DDH O2A O2A O 0 1 N N N -4.484 50.928 26.222 ? ? ? O2A DDH 25 DDH C2B C2B C 0 1 N N N -7.985 60.229 22.703 ? ? ? C2B DDH 26 DDH CMB CMB C 0 1 N N N -8.778 60.839 23.858 ? ? ? CMB DDH 27 DDH C3B C3B C 0 1 N N N -7.529 60.834 21.605 ? ? ? C3B DDH 28 DDH CAB CAB C 0 1 N N N -7.946 62.196 21.039 ? ? ? CAB DDH 29 DDH OCB OCB O 0 1 N N N -7.106 62.904 20.481 ? ? ? OCB DDH 30 DDH CBB CBB C 0 1 N N N -9.093 62.749 21.473 ? ? ? CBB DDH 31 DDH C2C C2C C 0 1 Y N N -4.420 59.687 17.935 ? ? ? C2C DDH 32 DDH CMC CMC C 0 1 N N N -4.371 61.045 17.199 ? ? ? CMC DDH 33 DDH C3C C3C C 0 1 Y N N -3.654 58.660 17.636 ? ? ? C3C DDH 34 DDH CAC CAC C 0 1 N N N -2.567 58.576 16.561 ? ? ? CAC DDH 35 DDH OCC OCC O 0 1 N N N -1.645 57.835 16.831 ? ? ? OCC DDH 36 DDH CBC CBC C 0 1 N N N -2.477 59.424 15.523 ? ? ? CBC DDH 37 DDH C2D C2D C 0 1 N N N -3.482 53.843 19.171 ? ? ? C2D DDH 38 DDH CMD CMD C 0 1 N N N -2.862 53.257 17.889 ? ? ? CMD DDH 39 DDH C3D C3D C 0 1 N N N -4.008 53.196 20.221 ? ? ? C3D DDH 40 DDH CAD CAD C 0 1 N N N -4.084 51.682 20.514 ? ? ? CAD DDH 41 DDH CBD CBD C 0 1 N N N -2.979 51.270 21.483 ? ? ? CBD DDH 42 DDH CGD CGD C 0 1 N N N -2.972 49.819 21.887 ? ? ? CGD DDH 43 DDH O1D O1D O 0 1 N N N -2.214 49.624 22.873 ? ? ? O1D DDH 44 DDH O2D O2D O 0 1 N N N -3.681 49.041 21.202 ? ? ? O2D DDH 45 DDH HHA HHA H 0 1 N N N -5.541 52.922 22.548 ? ? ? HHA DDH 46 DDH HHB HHB H 0 1 N N N -7.939 58.387 24.765 ? ? ? HHB DDH 47 DDH HHC HHC H 0 1 N N N -6.140 61.187 19.372 ? ? ? HHC DDH 48 DDH HHD HHD H 0 1 N N N -2.762 56.036 17.675 ? ? ? HHD DDH 49 DDH HAA1 HAA1 H 0 0 N N N -7.524 53.078 25.230 ? ? ? HAA1 DDH 50 DDH HAA2 HAA2 H 0 0 N N N -6.346 52.566 23.973 ? ? ? HAA2 DDH 51 DDH HMA1 HMA1 H 0 0 N N N -8.065 55.003 26.440 ? ? ? HMA1 DDH 52 DDH HMA2 HMA2 H 0 0 N N N -7.957 56.794 26.368 ? ? ? HMA2 DDH 53 DDH HMA3 HMA3 H 0 0 N N N -9.237 55.933 25.447 ? ? ? HMA3 DDH 54 DDH HBA1 HBA1 H 0 0 N N N -4.484 53.255 25.414 ? ? ? HBA1 DDH 55 DDH HBA2 HBA2 H 0 0 N N N -5.645 53.820 26.664 ? ? ? HBA2 DDH 56 DDH HO2A HO2A H 0 0 N N N -4.511 50.156 26.775 ? ? ? HO2A DDH 57 DDH HMB1 HMB1 H 0 0 N N N -9.056 61.873 23.607 ? ? ? HMB1 DDH 58 DDH HMB2 HMB2 H 0 0 N N N -9.688 60.246 24.031 ? ? ? HMB2 DDH 59 DDH HMB3 HMB3 H 0 0 N N N -8.160 60.836 24.768 ? ? ? HMB3 DDH 60 DDH HOCB HOCB H 0 0 N N N -7.515 63.709 20.187 ? ? ? HOCB DDH 61 DDH HBB1 HBB1 H 0 0 N N N -9.271 63.805 21.331 ? ? ? HBB1 DDH 62 DDH HBB2 HBB2 H 0 0 N N N -9.836 62.137 21.963 ? ? ? HBB2 DDH 63 DDH HMC1 HMC1 H 0 0 N N N -3.615 61.690 17.669 ? ? ? HMC1 DDH 64 DDH HMC2 HMC2 H 0 0 N N N -4.108 60.881 16.144 ? ? ? HMC2 DDH 65 DDH HMC3 HMC3 H 0 0 N N N -5.356 61.531 17.260 ? ? ? HMC3 DDH 66 DDH HBC1 HBC1 H 0 0 N N N -1.498 59.306 15.036 ? ? ? HBC1 DDH 67 DDH HBC2 HBC2 H 0 0 N N N -3.275 59.203 14.799 ? ? ? HBC2 DDH 68 DDH HBC3 HBC3 H 0 0 N N N -2.585 60.458 15.884 ? ? ? HBC3 DDH 69 DDH HMD1 HMD1 H 0 0 N N N -2.656 52.187 18.037 ? ? ? HMD1 DDH 70 DDH HMD2 HMD2 H 0 0 N N N -3.564 53.383 17.052 ? ? ? HMD2 DDH 71 DDH HMD3 HMD3 H 0 0 N N N -1.923 53.783 17.662 ? ? ? HMD3 DDH 72 DDH HAD1 HAD1 H 0 0 N N N -5.062 51.448 20.959 ? ? ? HAD1 DDH 73 DDH HAD2 HAD2 H 0 0 N N N -3.967 51.125 19.573 ? ? ? HAD2 DDH 74 DDH HBD1 HBD1 H 0 0 N N N -2.012 51.493 21.008 ? ? ? HBD1 DDH 75 DDH HBD2 HBD2 H 0 0 N N N -3.087 51.874 22.396 ? ? ? HBD2 DDH 76 DDH HO1D HO1D H 0 0 N N N -2.217 48.701 23.098 ? ? ? HO1D DDH 77 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DDH FE NA SING N N 1 DDH FE NB SING N N 2 DDH FE NC SING N N 3 DDH FE ND SING N N 4 DDH NA C1A SING N N 5 DDH NA C4A SING N N 6 DDH NB C1B DOUB N N 7 DDH NB C4B SING N N 8 DDH NC C1C SING Y N 9 DDH NC C4C SING Y N 10 DDH ND C4D DOUB N N 11 DDH ND C1D SING N N 12 DDH C1A CHA DOUB N N 13 DDH C1A C2A SING N N 14 DDH CHA C4D SING N N 15 DDH CHA HHA SING N N 16 DDH C4D C3D SING N N 17 DDH C1B CHB SING N N 18 DDH C1B C2B SING N N 19 DDH CHB C4A DOUB N N 20 DDH CHB HHB SING N N 21 DDH C4A C3A SING N N 22 DDH C1C CHC SING N N 23 DDH C1C C2C DOUB Y N 24 DDH CHC C4B DOUB N N 25 DDH CHC HHC SING N N 26 DDH C4B C3B SING N N 27 DDH C1D CHD DOUB N N 28 DDH C1D C2D SING N N 29 DDH CHD C4C SING N N 30 DDH CHD HHD SING N N 31 DDH C4C C3C DOUB Y N 32 DDH C2A CAA SING N N 33 DDH C2A C3A DOUB N N 34 DDH CAA CBA SING N N 35 DDH CAA HAA1 SING N N 36 DDH CAA HAA2 SING N N 37 DDH C3A CMA SING N N 38 DDH CMA HMA1 SING N N 39 DDH CMA HMA2 SING N N 40 DDH CMA HMA3 SING N N 41 DDH CBA CGA SING N N 42 DDH CBA HBA1 SING N N 43 DDH CBA HBA2 SING N N 44 DDH CGA O1A DOUB N N 45 DDH CGA O2A SING N N 46 DDH O2A HO2A SING N N 47 DDH C2B CMB SING N N 48 DDH C2B C3B DOUB N N 49 DDH CMB HMB1 SING N N 50 DDH CMB HMB2 SING N N 51 DDH CMB HMB3 SING N N 52 DDH C3B CAB SING N N 53 DDH CAB OCB SING N N 54 DDH CAB CBB DOUB N N 55 DDH OCB HOCB SING N N 56 DDH CBB HBB1 SING N N 57 DDH CBB HBB2 SING N N 58 DDH C2C CMC SING N N 59 DDH C2C C3C SING Y N 60 DDH CMC HMC1 SING N N 61 DDH CMC HMC2 SING N N 62 DDH CMC HMC3 SING N N 63 DDH C3C CAC SING N N 64 DDH CAC OCC DOUB N N 65 DDH CAC CBC SING N N 66 DDH CBC HBC1 SING N N 67 DDH CBC HBC2 SING N N 68 DDH CBC HBC3 SING N N 69 DDH C2D CMD SING N N 70 DDH C2D C3D DOUB N N 71 DDH CMD HMD1 SING N N 72 DDH CMD HMD2 SING N N 73 DDH CMD HMD3 SING N N 74 DDH C3D CAD SING N N 75 DDH CAD CBD SING N N 76 DDH CAD HAD1 SING N N 77 DDH CAD HAD2 SING N N 78 DDH CBD CGD SING N N 79 DDH CBD HBD1 SING N N 80 DDH CBD HBD2 SING N N 81 DDH CGD O1D SING N N 82 DDH CGD O2D DOUB N N 83 DDH O1D HO1D SING N N 84 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DDH InChI InChI 1.06 "InChI=1S/C34H34N4O6.Fe/c1-15-21(7-9-31(41)42)27-14-28-22(8-10-32(43)44)16(2)24(36-28)12-29-34(20(6)40)18(4)26(38-29)13-30-33(19(5)39)17(3)25(37-30)11-23(15)35-27;/h11-14H,5,7-10H2,1-4,6H3,(H5,35,36,37,38,39,40,41,42,43,44);/q;+2/p-2/b23-11-,24-12-,25-11-,26-13-,27-14-,28-14-,29-12-,30-13-;" DDH InChIKey InChI 1.06 OWIWZAJUMZLTLI-IDTMDVKXSA-L DDH SMILES_CANONICAL CACTVS 3.385 "CC(=O)c1c(C)c2C=C3N=C(C=C4[N@@]5[Fe]n2c1C=C6N=C(C=C5C(=C4C)CCC(O)=O)C(=C6C)CCC(O)=O)C(=C3C(O)=C)C" DDH SMILES CACTVS 3.385 "CC(=O)c1c(C)c2C=C3N=C(C=C4[N]5[Fe]n2c1C=C6N=C(C=C5C(=C4C)CCC(O)=O)C(=C6C)CCC(O)=O)C(=C3C(O)=C)C" DDH SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c2n3c(c1C(=O)C)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)CCC(=O)O)C(=C(C7=C2)C(=C)O)C)CCC(=O)O)C" DDH SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c2n3c(c1C(=O)C)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)CCC(=O)O)C(=C(C7=C2)C(=C)O)C)CCC(=O)O)C" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id DDH _pdbx_chem_comp_synonyms.name DIACETYLDEUTEROHEME _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DDH "Modify synonyms" 2021-03-01 PDBE DDH "Modify descriptor" 2023-09-23 RCSB #